RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 IGHV3-30-5P0DP03 117 aa3.12□□□□□ -1.91
DDB1-219ENST00000541513 PLNP26678 52 aa3.12□□□□□ -1.91
DDB1-219ENST00000541513 CNBPP62633 177 aaKnown RBP3.12□□□□□ -1.91
DDB1-219ENST00000541513 C1orf137Q5JT78 98 aa3.12□□□□□ -1.91
DDB1-219ENST00000541513 AMELXQ99217 191 aa3.12□□□□□ -1.91
DDB1-219ENST00000541513 ANAPC11Q9NYG5 84 aa3.12□□□□□ -1.91
DDB1-219ENST00000541513 RYR2Q92736 4967 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 FRAS1Q86XX4 4008 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 IGLV4-60A0A075B6I1 120 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 MGPP08493 103 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 CCL18P55774 89 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 DNAH2Q9P225 4427 aa3.11□□□□□ -1.91
DDB1-219ENST00000541513 DNAH17Q9UFH2 4485 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 PPP1R17O96001 155 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 KRTAP1-4P0C5Y4 121 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 SPAG11BQ08648 103 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 LELP1Q5T871 98 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 SPAG11AQ6PDA7 123 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 UBE2DNLQ8IWF7 75 aa3.1□□□□□ -1.91
DDB1-219ENST00000541513 K7EMI3 77 aa3.09□□□□□ -1.91
DDB1-219ENST00000541513 LY6G6CO95867 125 aa3.09□□□□□ -1.91
DDB1-219ENST00000541513 HYDINQ4G0P3 5121 aa3.09□□□□□ -1.91
DDB1-219ENST00000541513 NDUFB1O75438 58 aa3.08□□□□□ -1.92
DDB1-219ENST00000541513 GAS8-AS1O95177 125 aa3.08□□□□□ -1.92
DDB1-219ENST00000541513 POLR2KP53803 58 aaKnown RBP3.08□□□□□ -1.92
DDB1-219ENST00000541513 NREPQ16612 68 aa3.08□□□□□ -1.92
DDB1-219ENST00000541513 LINC01556Q5JQF7 62 aa3.08□□□□□ -1.92
DDB1-219ENST00000541513 RPL39LQ96EH5 51 aaKnown RBP3.08□□□□□ -1.92
DDB1-219ENST00000541513 OBSCN-AS1Q96MR7 158 aa3.08□□□□□ -1.92
DDB1-219ENST00000541513 RYR3Q15413 4870 aa3.08□□□□□ -1.92
DDB1-219ENST00000541513 NBDYA0A0U1RRE5 68 aa3.07□□□□□ -1.92
DDB1-219ENST00000541513 I3L3M4 83 aa3.07□□□□□ -1.92
DDB1-219ENST00000541513 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
DDB1-219ENST00000541513 WFDC10BQ8IUB3 73 aa3.07□□□□□ -1.92
DDB1-219ENST00000541513 LINC00846Q9NV44 126 aa3.07□□□□□ -1.92
DDB1-219ENST00000541513 LINC01558Q9Y6Z2 57 aa3.07□□□□□ -1.92
DDB1-219ENST00000541513 LINC01546A6NGU7 62 aa3.06□□□□□ -1.92
DDB1-219ENST00000541513 SMIM2Q9BVW6 85 aa3.06□□□□□ -1.92
DDB1-219ENST00000541513 PLAC8Q9NZF1 115 aa3.06□□□□□ -1.92
DDB1-219ENST00000541513 FAT2Q9NYQ8 4349 aa3.05□□□□□ -1.92
DDB1-219ENST00000541513 IGKV2D-24A0A075B6R9 120 aa3.05□□□□□ -1.92
DDB1-219ENST00000541513 F8VRH5 84 aa3.05□□□□□ -1.92
DDB1-219ENST00000541513 KRTAP1-5Q9BYS1 174 aa3.05□□□□□ -1.92
DDB1-219ENST00000541513 UBL5Q9BZL1 73 aa3.05□□□□□ -1.92
DDB1-219ENST00000541513 HECTD4Q9Y4D8 3996 aa3.05□□□□□ -1.92
DDB1-219ENST00000541513 DNAH11Q96DT5 4516 aa3.04□□□□□ -1.92
DDB1-219ENST00000541513 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
DDB1-219ENST00000541513 M0R2N4 97 aa3.04□□□□□ -1.92
DDB1-219ENST00000541513 ENHOQ6UWT2 76 aa3.04□□□□□ -1.92
DDB1-219ENST00000541513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.03□□□□□ -1.92
DDB1-219ENST00000541513 IGKV2-29A2NJV5 120 aaPredicted RBP3.03□□□□□ -1.92
DDB1-219ENST00000541513 TPRXLQ17RH7 258 aa3.03□□□□□ -1.92
DDB1-219ENST00000541513 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
DDB1-219ENST00000541513 Q6ZRN7 208 aaPredicted RBP3.03□□□□□ -1.92
DDB1-219ENST00000541513 COX7B2Q8TF08 81 aa3.03□□□□□ -1.92
DDB1-219ENST00000541513 DEFB104AQ8WTQ1 72 aa3.03□□□□□ -1.92
DDB1-219ENST00000541513 PKD1P98161 4303 aa3.03□□□□□ -1.92
DDB1-219ENST00000541513 PKHD1P08F94 4074 aa3.03□□□□□ -1.93
DDB1-219ENST00000541513 ANGP03950 147 aaKnown RBP3.02□□□□□ -1.93
DDB1-219ENST00000541513 RPL39P62891 51 aaKnown RBP3.02□□□□□ -1.93
DDB1-219ENST00000541513 LINC00208Q96KT6 92 aa3.02□□□□□ -1.93
DDB1-219ENST00000541513 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
DDB1-219ENST00000541513 A0A0G2JQZ4 141 aa3.01□□□□□ -1.93
DDB1-219ENST00000541513 DYNC1H1Q14204 4646 aaKnown RBP3.01□□□□□ -1.93
DDB1-219ENST00000541513 IGIPA6NJ69 53 aa3□□□□□ -1.93
DDB1-219ENST00000541513 UQCR11O14957 56 aa3□□□□□ -1.93
DDB1-219ENST00000541513 KRTAP13-2Q52LG2 175 aa3□□□□□ -1.93
DDB1-219ENST00000541513 ZCCHC13Q8WW36 166 aaKnown RBP3□□□□□ -1.93
DDB1-219ENST00000541513 DNAH5Q8TE73 4624 aa3□□□□□ -1.93
DDB1-219ENST00000541513 A0A087WTM6 91 aa2.99□□□□□ -1.93
DDB1-219ENST00000541513 LINC00959A0A1B0GUT2 108 aa2.99□□□□□ -1.93
DDB1-219ENST00000541513 A0A1B0GVY2 172 aa2.99□□□□□ -1.93
DDB1-219ENST00000541513 H0Y9P7 68 aa2.99□□□□□ -1.93
DDB1-219ENST00000541513 CLPSL2Q6UWE3 100 aa2.99□□□□□ -1.93
DDB1-219ENST00000541513 SPACA4Q8TDM5 124 aa2.99□□□□□ -1.93
DDB1-219ENST00000541513 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
DDB1-219ENST00000541513 JMJD7-PLA2G4BH0Y9G9 81 aa2.98□□□□□ -1.93
DDB1-219ENST00000541513 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
DDB1-219ENST00000541513 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
DDB1-219ENST00000541513 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
DDB1-219ENST00000541513 IGKV3OR2-268A0A0C4DH90 116 aa2.97□□□□□ -1.93
DDB1-219ENST00000541513 DNAH8Q96JB1 4490 aa2.97□□□□□ -1.93
DDB1-219ENST00000541513 PDE6GP18545 87 aa2.96□□□□□ -1.94
DDB1-219ENST00000541513 SPINK7P58062 85 aa2.96□□□□□ -1.94
DDB1-219ENST00000541513 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
DDB1-219ENST00000541513 SPRR4Q96PI1 79 aa2.96□□□□□ -1.94
DDB1-219ENST00000541513 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
DDB1-219ENST00000541513 GVQW2A0A096LPI5 108 aaPredicted RBP2.95□□□□□ -1.94
DDB1-219ENST00000541513 IGLV6-57P01721 117 aa2.95□□□□□ -1.94
DDB1-219ENST00000541513 COX6A2Q02221 97 aa2.95□□□□□ -1.94
DDB1-219ENST00000541513 EPPK1P58107 5090 aaKnown RBP2.95□□□□□ -1.94
DDB1-219ENST00000541513 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
DDB1-219ENST00000541513 APOBP04114 4563 aaKnown RBP2.94□□□□□ -1.94
DDB1-219ENST00000541513 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
DDB1-219ENST00000541513 CDKN2A-AS1Q9UH64 79 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms