RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ZNF861PO60384 105 aa10.25□□□□□ -0.77
SPIDR-227ENST00000541342 C1orf195Q5TG92 126 aa10.25□□□□□ -0.77
SPIDR-227ENST00000541342 LINC00483Q53H64 154 aa10.23□□□□□ -0.77
SPIDR-227ENST00000541342 Q5VV11 94 aa10.23□□□□□ -0.77
SPIDR-227ENST00000541342 MOBPQ13875 183 aa10.22□□□□□ -0.77
SPIDR-227ENST00000541342 Q8N9P0 234 aaPredicted RBP10.22□□□□□ -0.77
SPIDR-227ENST00000541342 A8MU10 97 aa10.21□□□□□ -0.77
SPIDR-227ENST00000541342 IGLV7-43P04211 117 aa10.21□□□□□ -0.78
SPIDR-227ENST00000541342 RYR2Q92736 4967 aa10.2□□□□□ -0.78
SPIDR-227ENST00000541342 VPS13BQ7Z7G8 4022 aa10.2□□□□□ -0.78
SPIDR-227ENST00000541342 KMT2CQ8NEZ4 4911 aaKnown RBP10.2□□□□□ -0.78
SPIDR-227ENST00000541342 ANAPC11Q9NYG5 84 aa10.19□□□□□ -0.78
SPIDR-227ENST00000541342 V9GYY9 64 aa10.19□□□□□ -0.78
SPIDR-227ENST00000541342 IGLV7-46A0A075B6I9 117 aa10.18□□□□□ -0.78
SPIDR-227ENST00000541342 ZNF706Q9Y5V0 76 aaPredicted RBP10.18□□□□□ -0.78
SPIDR-227ENST00000541342 CD164Q04900 197 aa10.17□□□□□ -0.78
SPIDR-227ENST00000541342 C8orf17Q9NRJ1 99 aa10.17□□□□□ -0.78
SPIDR-227ENST00000541342 COA5Q86WW8 74 aa10.15□□□□□ -0.78
SPIDR-227ENST00000541342 PCOTHQ58A44 107 aa10.15□□□□□ -0.78
SPIDR-227ENST00000541342 DYNC1H1Q14204 4646 aaKnown RBP10.14□□□□□ -0.79
SPIDR-227ENST00000541342 A0A087X002 238 aa10.13□□□□□ -0.79
SPIDR-227ENST00000541342 NOTCH2NLQ7Z3S9 236 aa10.13□□□□□ -0.79
SPIDR-227ENST00000541342 TP53AIP1Q9HCN2 124 aa10.12□□□□□ -0.79
SPIDR-227ENST00000541342 IGHV6-1A0A0B4J1U7 121 aa10.12□□□□□ -0.79
SPIDR-227ENST00000541342 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
SPIDR-227ENST00000541342 LIMD2Q9BT23 127 aa10.12□□□□□ -0.79
SPIDR-227ENST00000541342 PRR15LQ9BU68 103 aa10.09□□□□□ -0.79
SPIDR-227ENST00000541342 A0A1B0GVY2 172 aa10.07□□□□□ -0.8
SPIDR-227ENST00000541342 CHKB-CPT1BH3BT56 60 aa10.07□□□□□ -0.8
SPIDR-227ENST00000541342 NDUFS5O43920 106 aa10.05□□□□□ -0.8
SPIDR-227ENST00000541342 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
SPIDR-227ENST00000541342 LOC101927531A0A1B0GV80 90 aa10.04□□□□□ -0.8
SPIDR-227ENST00000541342 MRPL34Q9BQ48 92 aaKnown RBP10.04□□□□□ -0.8
SPIDR-227ENST00000541342 Q75L30 129 aa10.02□□□□□ -0.8
SPIDR-227ENST00000541342 PMAIP1Q13794 54 aa10□□□□□ -0.81
SPIDR-227ENST00000541342 LCA10Q71F78 164 aa10□□□□□ -0.81
SPIDR-227ENST00000541342 HRES1P13985 223 aa9.99□□□□□ -0.81
SPIDR-227ENST00000541342 CDK2AP2O75956 126 aa9.98□□□□□ -0.81
SPIDR-227ENST00000541342 Q5W150 140 aa9.98□□□□□ -0.81
SPIDR-227ENST00000541342 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
SPIDR-227ENST00000541342 SPAG11AQ6PDA7 123 aa9.97□□□□□ -0.81
SPIDR-227ENST00000541342 RYR3Q15413 4870 aa9.95□□□□□ -0.82
SPIDR-227ENST00000541342 FAT1Q14517 4588 aa9.95□□□□□ -0.82
SPIDR-227ENST00000541342 KRTAP13-2Q52LG2 175 aa9.94□□□□□ -0.82
SPIDR-227ENST00000541342 LINC01558Q9Y6Z2 57 aa9.94□□□□□ -0.82
SPIDR-227ENST00000541342 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
SPIDR-227ENST00000541342 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
SPIDR-227ENST00000541342 A6NED7 52 aa9.92□□□□□ -0.82
SPIDR-227ENST00000541342 SSBP3-AS1Q7Z2R9 100 aa9.91□□□□□ -0.82
SPIDR-227ENST00000541342 SMR3BP02814 79 aaPredicted RBP9.9□□□□□ -0.82
SPIDR-227ENST00000541342 SEC61GP60059 68 aa9.87□□□□□ -0.83
SPIDR-227ENST00000541342 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
SPIDR-227ENST00000541342 ATP11AUNQ6ZP68 121 aa9.85□□□□□ -0.83
SPIDR-227ENST00000541342 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
SPIDR-227ENST00000541342 SPINK7P58062 85 aa9.84□□□□□ -0.83
SPIDR-227ENST00000541342 PRR26Q8N8Z3 221 aa9.83□□□□□ -0.84
SPIDR-227ENST00000541342 PLA2G1BP04054 148 aaKnown RBP9.82□□□□□ -0.84
SPIDR-227ENST00000541342 KRTAP10-4P60372 401 aaPredicted RBP9.82□□□□□ -0.84
SPIDR-227ENST00000541342 A6NN06 94 aa9.8□□□□□ -0.84
SPIDR-227ENST00000541342 C8orf87E5RJ46 101 aa9.76□□□□□ -0.85
SPIDR-227ENST00000541342 KTN1-AS1Q86SY8 53 aa9.76□□□□□ -0.85
SPIDR-227ENST00000541342 HSPG2P98160 4391 aa9.75□□□□□ -0.85
SPIDR-227ENST00000541342 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
SPIDR-227ENST00000541342 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
SPIDR-227ENST00000541342 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
SPIDR-227ENST00000541342 ACYP2P14621 99 aa9.71□□□□□ -0.85
SPIDR-227ENST00000541342 LINC00313P59037 77 aa9.71□□□□□ -0.85
SPIDR-227ENST00000541342 RETNLBQ9BQ08 111 aa9.71□□□□□ -0.85
SPIDR-227ENST00000541342 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
SPIDR-227ENST00000541342 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
SPIDR-227ENST00000541342 IGKV2-30P06310 120 aa9.66□□□□□ -0.86
SPIDR-227ENST00000541342 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
SPIDR-227ENST00000541342 RYR1P21817 5038 aa9.64□□□□□ -0.87
SPIDR-227ENST00000541342 SPINK1P00995 79 aa9.63□□□□□ -0.87
SPIDR-227ENST00000541342 LINC00304Q8N9R0 145 aa9.62□□□□□ -0.87
SPIDR-227ENST00000541342 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
SPIDR-227ENST00000541342 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
SPIDR-227ENST00000541342 LRP1Q07954 4544 aaKnown RBP9.57□□□□□ -0.88
SPIDR-227ENST00000541342 C7orf65Q6ZTY9 151 aa9.56□□□□□ -0.88
SPIDR-227ENST00000541342 TNXBP22105 4242 aa9.56□□□□□ -0.88
SPIDR-227ENST00000541342 KRTAP17-1Q9BYP8 105 aa9.55□□□□□ -0.88
SPIDR-227ENST00000541342 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
SPIDR-227ENST00000541342 KIAA1109Q2LD37 5005 aa9.54□□□□□ -0.88
SPIDR-227ENST00000541342 Q5VSD8 79 aa9.54□□□□□ -0.88
SPIDR-227ENST00000541342 A0A1B0GU69 56 aa9.51□□□□□ -0.89
SPIDR-227ENST00000541342 IGKV2D-30A0A075B6S6 120 aa9.51□□□□□ -0.89
SPIDR-227ENST00000541342 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
SPIDR-227ENST00000541342 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
SPIDR-227ENST00000541342 Q8N1X5 172 aa9.4□□□□□ -0.9
SPIDR-227ENST00000541342 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-227ENST00000541342 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
SPIDR-227ENST00000541342 KRTAP10-8P60410 259 aa9.39□□□□□ -0.91
SPIDR-227ENST00000541342 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
SPIDR-227ENST00000541342 PRAC1Q96KF2 57 aa9.37□□□□□ -0.91
SPIDR-227ENST00000541342 MIR22HGQ0VDD5 57 aa9.36□□□□□ -0.91
SPIDR-227ENST00000541342 UQCR11O14957 56 aa9.36□□□□□ -0.91
SPIDR-227ENST00000541342 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
SPIDR-227ENST00000541342 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
SPIDR-227ENST00000541342 C20orf166-AS1Q96NR2 134 aa9.21□□□□□ -0.94
SPIDR-227ENST00000541342 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms