RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 A0A1B0GW54 56 aa8.8□□□□□ -1
SFSWAP-210ENST00000541286 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
SFSWAP-210ENST00000541286 COA5Q86WW8 74 aa8.79□□□□□ -1
SFSWAP-210ENST00000541286 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.78□□□□□ -1
SFSWAP-210ENST00000541286 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
SFSWAP-210ENST00000541286 LIMD2Q9BT23 127 aa8.76□□□□□ -1.01
SFSWAP-210ENST00000541286 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
SFSWAP-210ENST00000541286 CNBPP62633 177 aaKnown RBP8.75□□□□□ -1.01
SFSWAP-210ENST00000541286 H3BS24 57 aa8.74□□□□□ -1.01
SFSWAP-210ENST00000541286 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
SFSWAP-210ENST00000541286 NDUFS5O43920 106 aa8.73□□□□□ -1.01
SFSWAP-210ENST00000541286 SPINK7P58062 85 aa8.73□□□□□ -1.01
SFSWAP-210ENST00000541286 C14orf177Q52M58 125 aa8.71□□□□□ -1.01
SFSWAP-210ENST00000541286 ANAPC11Q9NYG5 84 aa8.71□□□□□ -1.01
SFSWAP-210ENST00000541286 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
SFSWAP-210ENST00000541286 PRAC1Q96KF2 57 aa8.71□□□□□ -1.02
SFSWAP-210ENST00000541286 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
SFSWAP-210ENST00000541286 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
SFSWAP-210ENST00000541286 ATP11AUNQ6ZP68 121 aa8.69□□□□□ -1.02
SFSWAP-210ENST00000541286 MOBPQ13875 183 aa8.69□□□□□ -1.02
SFSWAP-210ENST00000541286 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
SFSWAP-210ENST00000541286 A6NN06 94 aa8.67□□□□□ -1.02
SFSWAP-210ENST00000541286 A8MWP4 228 aa8.66□□□□□ -1.02
SFSWAP-210ENST00000541286 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
SFSWAP-210ENST00000541286 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.02
SFSWAP-210ENST00000541286 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
SFSWAP-210ENST00000541286 ADM2Q7Z4H4 148 aa8.65□□□□□ -1.02
SFSWAP-210ENST00000541286 Q75L30 129 aa8.65□□□□□ -1.02
SFSWAP-210ENST00000541286 LINC00472Q9H8W2 130 aa8.64□□□□□ -1.03
SFSWAP-210ENST00000541286 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
SFSWAP-210ENST00000541286 A0A1B0GVY2 172 aa8.63□□□□□ -1.03
SFSWAP-210ENST00000541286 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
SFSWAP-210ENST00000541286 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
SFSWAP-210ENST00000541286 SPINK6Q6UWN8 80 aa8.62□□□□□ -1.03
SFSWAP-210ENST00000541286 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
SFSWAP-210ENST00000541286 C8orf87E5RJ46 101 aa8.62□□□□□ -1.03
SFSWAP-210ENST00000541286 CDC42SE1Q9NRR8 79 aa8.61□□□□□ -1.03
SFSWAP-210ENST00000541286 CIRBP-AS1Q8TBR5 109 aa8.61□□□□□ -1.03
SFSWAP-210ENST00000541286 CDK2AP2O75956 126 aa8.59□□□□□ -1.03
SFSWAP-210ENST00000541286 HSPG2P98160 4391 aa8.59□□□□□ -1.03
SFSWAP-210ENST00000541286 IGLV7-46A0A075B6I9 117 aa8.59□□□□□ -1.03
SFSWAP-210ENST00000541286 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
SFSWAP-210ENST00000541286 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
SFSWAP-210ENST00000541286 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
SFSWAP-210ENST00000541286 MMP24-AS1A0A0U1RRL7 71 aa8.57□□□□□ -1.04
SFSWAP-210ENST00000541286 SPRR1BP22528 89 aa8.57□□□□□ -1.04
SFSWAP-210ENST00000541286 HRES1P13985 223 aa8.57□□□□□ -1.04
SFSWAP-210ENST00000541286 LINC00313P59037 77 aa8.55□□□□□ -1.04
SFSWAP-210ENST00000541286 PSORS1C2Q9UIG4 136 aa8.54□□□□□ -1.04
SFSWAP-210ENST00000541286 RYR1P21817 5038 aa8.53□□□□□ -1.04
SFSWAP-210ENST00000541286 A0A087X002 238 aa8.53□□□□□ -1.04
SFSWAP-210ENST00000541286 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
SFSWAP-210ENST00000541286 MYCBP2O75592 4640 aa8.52□□□□□ -1.05
SFSWAP-210ENST00000541286 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
SFSWAP-210ENST00000541286 H3BPC8 53 aa8.5□□□□□ -1.05
SFSWAP-210ENST00000541286 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
SFSWAP-210ENST00000541286 LINC01558Q9Y6Z2 57 aa8.5□□□□□ -1.05
SFSWAP-210ENST00000541286 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
SFSWAP-210ENST00000541286 KRTAP13-1Q8IUC0 172 aa8.5□□□□□ -1.05
SFSWAP-210ENST00000541286 Q96NJ1 140 aa8.47□□□□□ -1.05
SFSWAP-210ENST00000541286 Q6ZSA8 131 aa8.46□□□□□ -1.06
SFSWAP-210ENST00000541286 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
SFSWAP-210ENST00000541286 A0A1B0GVX0 72 aa8.44□□□□□ -1.06
SFSWAP-210ENST00000541286 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
SFSWAP-210ENST00000541286 ZNF861PO60384 105 aa8.42□□□□□ -1.06
SFSWAP-210ENST00000541286 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
SFSWAP-210ENST00000541286 Q5W150 140 aa8.4□□□□□ -1.06
SFSWAP-210ENST00000541286 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.07
SFSWAP-210ENST00000541286 ABCA13Q86UQ4 5058 aa8.39□□□□□ -1.07
SFSWAP-210ENST00000541286 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
SFSWAP-210ENST00000541286 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
SFSWAP-210ENST00000541286 LINC00483Q53H64 154 aa8.36□□□□□ -1.07
SFSWAP-210ENST00000541286 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
SFSWAP-210ENST00000541286 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
SFSWAP-210ENST00000541286 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
SFSWAP-210ENST00000541286 A0A1B0GU69 56 aa8.3□□□□□ -1.08
SFSWAP-210ENST00000541286 PKHD1L1Q86WI1 4243 aa8.28□□□□□ -1.08
SFSWAP-210ENST00000541286 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
SFSWAP-210ENST00000541286 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
SFSWAP-210ENST00000541286 HERC2O95714 4834 aa8.28□□□□□ -1.08
SFSWAP-210ENST00000541286 CSAG1Q6PB30 78 aa8.27□□□□□ -1.08
SFSWAP-210ENST00000541286 Q5VSD8 79 aa8.27□□□□□ -1.09
SFSWAP-210ENST00000541286 KRTAP10-4P60372 401 aaPredicted RBP8.25□□□□□ -1.09
SFSWAP-210ENST00000541286 ACYP2P14621 99 aa8.24□□□□□ -1.09
SFSWAP-210ENST00000541286 SPINK1P00995 79 aa8.23□□□□□ -1.09
SFSWAP-210ENST00000541286 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
SFSWAP-210ENST00000541286 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
SFSWAP-210ENST00000541286 PLA2G1BP04054 148 aaKnown RBP8.19□□□□□ -1.1
SFSWAP-210ENST00000541286 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
SFSWAP-210ENST00000541286 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
SFSWAP-210ENST00000541286 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
SFSWAP-210ENST00000541286 FAM229AH3BQW9 127 aa8.15□□□□□ -1.11
SFSWAP-210ENST00000541286 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
SFSWAP-210ENST00000541286 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
SFSWAP-210ENST00000541286 UQCR11O14957 56 aa8.12□□□□□ -1.11
SFSWAP-210ENST00000541286 HERC1Q15751 4861 aa8.11□□□□□ -1.11
SFSWAP-210ENST00000541286 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
SFSWAP-210ENST00000541286 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
SFSWAP-210ENST00000541286 Q8N1X5 172 aa8.1□□□□□ -1.11
SFSWAP-210ENST00000541286 TNXBP22105 4242 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms