RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
LGR5-203ENST00000540815 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
LGR5-203ENST00000540815 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
LGR5-203ENST00000540815 ATP11AUNQ6ZP68 121 aa6.83□□□□□ -1.32
LGR5-203ENST00000540815 IGLV9-49A0A0B4J1Y8 123 aa6.82□□□□□ -1.32
LGR5-203ENST00000540815 ZNF861PO60384 105 aa6.82□□□□□ -1.32
LGR5-203ENST00000540815 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
LGR5-203ENST00000540815 ALMS1Q8TCU4 4167 aa6.81□□□□□ -1.32
LGR5-203ENST00000540815 A8MWP4 228 aa6.81□□□□□ -1.32
LGR5-203ENST00000540815 Q75L30 129 aa6.8□□□□□ -1.32
LGR5-203ENST00000540815 FRAS1Q86XX4 4008 aa6.8□□□□□ -1.32
LGR5-203ENST00000540815 WWC2-AS2Q96NR7 200 aa6.8□□□□□ -1.32
LGR5-203ENST00000540815 LOC101927531A0A1B0GV80 90 aa6.78□□□□□ -1.32
LGR5-203ENST00000540815 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
LGR5-203ENST00000540815 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
LGR5-203ENST00000540815 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
LGR5-203ENST00000540815 Q96NJ1 140 aa6.76□□□□□ -1.33
LGR5-203ENST00000540815 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
LGR5-203ENST00000540815 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
LGR5-203ENST00000540815 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
LGR5-203ENST00000540815 SPANXA2-OT1Q8N9U9 137 aa6.75□□□□□ -1.33
LGR5-203ENST00000540815 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
LGR5-203ENST00000540815 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
LGR5-203ENST00000540815 ANAPC11Q9NYG5 84 aa6.75□□□□□ -1.33
LGR5-203ENST00000540815 C8orf87E5RJ46 101 aa6.74□□□□□ -1.33
LGR5-203ENST00000540815 NDUFS5O43920 106 aa6.74□□□□□ -1.33
LGR5-203ENST00000540815 LINC00313P59037 77 aa6.74□□□□□ -1.33
LGR5-203ENST00000540815 MMP24-AS1A0A0U1RRL7 71 aa6.72□□□□□ -1.33
LGR5-203ENST00000540815 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
LGR5-203ENST00000540815 CIRBP-AS1Q8TBR5 109 aa6.72□□□□□ -1.33
LGR5-203ENST00000540815 IGLV7-46A0A075B6I9 117 aa6.72□□□□□ -1.33
LGR5-203ENST00000540815 PKD1P98161 4303 aa6.71□□□□□ -1.34
LGR5-203ENST00000540815 HRES1P13985 223 aa6.71□□□□□ -1.34
LGR5-203ENST00000540815 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
LGR5-203ENST00000540815 Q6ZSA8 131 aa6.69□□□□□ -1.34
LGR5-203ENST00000540815 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
LGR5-203ENST00000540815 H3BPC8 53 aa6.68□□□□□ -1.34
LGR5-203ENST00000540815 LINC01558Q9Y6Z2 57 aa6.68□□□□□ -1.34
LGR5-203ENST00000540815 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
LGR5-203ENST00000540815 C8orf17Q9NRJ1 99 aa6.67□□□□□ -1.34
LGR5-203ENST00000540815 A0A1B0GVX0 72 aa6.66□□□□□ -1.34
LGR5-203ENST00000540815 A0A087X002 238 aa6.66□□□□□ -1.34
LGR5-203ENST00000540815 NOTCH2NLQ7Z3S9 236 aa6.66□□□□□ -1.34
LGR5-203ENST00000540815 H3BS24 57 aa6.65□□□□□ -1.34
LGR5-203ENST00000540815 IGHV6-1A0A0B4J1U7 121 aa6.65□□□□□ -1.35
LGR5-203ENST00000540815 CDK2AP2O75956 126 aa6.65□□□□□ -1.35
LGR5-203ENST00000540815 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.35
LGR5-203ENST00000540815 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
LGR5-203ENST00000540815 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
LGR5-203ENST00000540815 RETNLBQ9BQ08 111 aa6.59□□□□□ -1.35
LGR5-203ENST00000540815 MRPL34Q9BQ48 92 aaKnown RBP6.59□□□□□ -1.35
LGR5-203ENST00000540815 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
LGR5-203ENST00000540815 SPINK6Q6UWN8 80 aa6.57□□□□□ -1.36
LGR5-203ENST00000540815 SACSQ9NZJ4 4579 aa6.57□□□□□ -1.36
LGR5-203ENST00000540815 Q5W150 140 aa6.56□□□□□ -1.36
LGR5-203ENST00000540815 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
LGR5-203ENST00000540815 KRTAP1-4P0C5Y4 121 aa6.54□□□□□ -1.36
LGR5-203ENST00000540815 VPS13BQ7Z7G8 4022 aa6.54□□□□□ -1.36
LGR5-203ENST00000540815 PKHD1P08F94 4074 aa6.53□□□□□ -1.36
LGR5-203ENST00000540815 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
LGR5-203ENST00000540815 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
LGR5-203ENST00000540815 A0A1B0GU69 56 aa6.46□□□□□ -1.37
LGR5-203ENST00000540815 KRTAP13-3Q3SY46 172 aa6.46□□□□□ -1.37
LGR5-203ENST00000540815 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
LGR5-203ENST00000540815 DYNC1H1Q14204 4646 aaKnown RBP6.45□□□□□ -1.38
LGR5-203ENST00000540815 TYMSOSQ8TAI1 123 aa6.44□□□□□ -1.38
LGR5-203ENST00000540815 A0A1B0GVY2 172 aa6.42□□□□□ -1.38
LGR5-203ENST00000540815 SPINK1P00995 79 aa6.41□□□□□ -1.38
LGR5-203ENST00000540815 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
LGR5-203ENST00000540815 ACYP2P14621 99 aa6.4□□□□□ -1.38
LGR5-203ENST00000540815 KRTAP16-1A8MUX0 517 aa6.4□□□□□ -1.38
LGR5-203ENST00000540815 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
LGR5-203ENST00000540815 SMR3BP02814 79 aaPredicted RBP6.38□□□□□ -1.39
LGR5-203ENST00000540815 RYR2Q92736 4967 aa6.37□□□□□ -1.39
LGR5-203ENST00000540815 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
LGR5-203ENST00000540815 APOBP04114 4563 aaKnown RBP6.37□□□□□ -1.39
LGR5-203ENST00000540815 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
LGR5-203ENST00000540815 LINC00304Q8N9R0 145 aa6.36□□□□□ -1.39
LGR5-203ENST00000540815 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
LGR5-203ENST00000540815 FAT1Q14517 4588 aa6.35□□□□□ -1.39
LGR5-203ENST00000540815 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
LGR5-203ENST00000540815 UQCR11O14957 56 aa6.33□□□□□ -1.4
LGR5-203ENST00000540815 KMT2CQ8NEZ4 4911 aaKnown RBP6.33□□□□□ -1.4
LGR5-203ENST00000540815 PKHD1L1Q86WI1 4243 aa6.33□□□□□ -1.4
LGR5-203ENST00000540815 IGKV2-30P06310 120 aa6.32□□□□□ -1.4
LGR5-203ENST00000540815 DMAC1Q96GE9 116 aa6.31□□□□□ -1.4
LGR5-203ENST00000540815 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
LGR5-203ENST00000540815 DMBT1Q9UGM3 2413 aaPredicted RBP6.24□□□□□ -1.41
LGR5-203ENST00000540815 Q8N1X5 172 aa6.23□□□□□ -1.41
LGR5-203ENST00000540815 A8MUU9 505 aa6.17□□□□□ -1.42
LGR5-203ENST00000540815 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
LGR5-203ENST00000540815 C9orf92A6NGG3 77 aa6.16□□□□□ -1.42
LGR5-203ENST00000540815 ROMO1P60602 79 aa6.16□□□□□ -1.42
LGR5-203ENST00000540815 HSPG2P98160 4391 aa6.15□□□□□ -1.43
LGR5-203ENST00000540815 H0YAA0 97 aa6.15□□□□□ -1.43
LGR5-203ENST00000540815 RYR3Q15413 4870 aa6.14□□□□□ -1.43
LGR5-203ENST00000540815 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
LGR5-203ENST00000540815 KRTAP17-1Q9BYP8 105 aa6.12□□□□□ -1.43
LGR5-203ENST00000540815 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
LGR5-203ENST00000540815 TNXBP22105 4242 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms