RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ELOF1P60002 83 aaKnown RBP4□□□□□ -1.77
YBX3-209ENST00000540747 Q6ZQT0 140 aa4□□□□□ -1.77
YBX3-209ENST00000540747 SSBP3-AS1Q7Z2R9 100 aa3.99□□□□□ -1.77
YBX3-209ENST00000540747 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
YBX3-209ENST00000540747 ERC2-IT1O76042 136 aa3.98□□□□□ -1.77
YBX3-209ENST00000540747 MOBPQ13875 183 aa3.98□□□□□ -1.77
YBX3-209ENST00000540747 SERP2Q8N6R1 65 aa3.98□□□□□ -1.77
YBX3-209ENST00000540747 A0A087WVE0 104 aa3.97□□□□□ -1.77
YBX3-209ENST00000540747 Q9BRP9 147 aa3.97□□□□□ -1.77
YBX3-209ENST00000540747 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
YBX3-209ENST00000540747 USH2AO75445 5202 aa3.97□□□□□ -1.77
YBX3-209ENST00000540747 ETDCA0A1B0GVM5 59 aa3.96□□□□□ -1.78
YBX3-209ENST00000540747 PCOTHQ58A44 107 aa3.96□□□□□ -1.78
YBX3-209ENST00000540747 Q6ZVQ6 151 aa3.96□□□□□ -1.78
YBX3-209ENST00000540747 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
YBX3-209ENST00000540747 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
YBX3-209ENST00000540747 SMIM20Q8N5G0 67 aa3.95□□□□□ -1.78
YBX3-209ENST00000540747 DEFB105AQ8NG35 78 aa3.95□□□□□ -1.78
YBX3-209ENST00000540747 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
YBX3-209ENST00000540747 CXCL6P80162 114 aa3.94□□□□□ -1.78
YBX3-209ENST00000540747 NREPQ16612 68 aa3.94□□□□□ -1.78
YBX3-209ENST00000540747 Q6ZRX8 168 aa3.94□□□□□ -1.78
YBX3-209ENST00000540747 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
YBX3-209ENST00000540747 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
YBX3-209ENST00000540747 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
YBX3-209ENST00000540747 A0A1B0GW54 56 aa3.91□□□□□ -1.78
YBX3-209ENST00000540747 SPRR1BP22528 89 aa3.9□□□□□ -1.79
YBX3-209ENST00000540747 TMEM258P61165 79 aa3.9□□□□□ -1.79
YBX3-209ENST00000540747 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
YBX3-209ENST00000540747 IGLV5-48A0A075B6I7 105 aa3.89□□□□□ -1.79
YBX3-209ENST00000540747 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
YBX3-209ENST00000540747 F8WEM9 126 aa3.89□□□□□ -1.79
YBX3-209ENST00000540747 J3KT08 172 aa3.89□□□□□ -1.79
YBX3-209ENST00000540747 BPY2O14599 106 aa3.89□□□□□ -1.79
YBX3-209ENST00000540747 ST20-AS1Q8NBB2 130 aa3.89□□□□□ -1.79
YBX3-209ENST00000540747 RPS28P62857 69 aaKnown RBP3.88□□□□□ -1.79
YBX3-209ENST00000540747 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
YBX3-209ENST00000540747 LIMD2Q9BT23 127 aa3.88□□□□□ -1.79
YBX3-209ENST00000540747 Q5XG85 94 aa3.87□□□□□ -1.79
YBX3-209ENST00000540747 M0R2T5 61 aa3.86□□□□□ -1.79
YBX3-209ENST00000540747 RPL37P61927 97 aaKnown RBP3.86□□□□□ -1.79
YBX3-209ENST00000540747 A0A1W2PNM2 257 aa3.85□□□□□ -1.79
YBX3-209ENST00000540747 IGKV4-1P06312 121 aa3.85□□□□□ -1.79
YBX3-209ENST00000540747 CD164Q04900 197 aa3.85□□□□□ -1.79
YBX3-209ENST00000540747 NDUFC1O43677 76 aa3.84□□□□□ -1.79
YBX3-209ENST00000540747 C1orf195Q5TG92 126 aa3.84□□□□□ -1.79
YBX3-209ENST00000540747 HRCT1Q6UXD1 115 aa3.84□□□□□ -1.79
YBX3-209ENST00000540747 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
YBX3-209ENST00000540747 FAM236DA0A1B0GTK5 79 aa3.83□□□□□ -1.8
YBX3-209ENST00000540747 FAM236CP0DP71 79 aa3.83□□□□□ -1.8
YBX3-209ENST00000540747 COX6B2Q6YFQ2 88 aa3.83□□□□□ -1.8
YBX3-209ENST00000540747 Q8N9L7 120 aa3.83□□□□□ -1.8
YBX3-209ENST00000540747 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
YBX3-209ENST00000540747 KLKP1Q107X0 134 aa3.82□□□□□ -1.8
YBX3-209ENST00000540747 SMIM29Q86T20 159 aa3.82□□□□□ -1.8
YBX3-209ENST00000540747 SNURFQ9Y675 71 aa3.82□□□□□ -1.8
YBX3-209ENST00000540747 H7BZZ5 65 aa3.8□□□□□ -1.8
YBX3-209ENST00000540747 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
YBX3-209ENST00000540747 IGFL1Q6UW32 110 aa3.8□□□□□ -1.8
YBX3-209ENST00000540747 TMEM254Q8TBM7 123 aa3.8□□□□□ -1.8
YBX3-209ENST00000540747 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
YBX3-209ENST00000540747 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
YBX3-209ENST00000540747 A0A0G2JQZ4 141 aa3.78□□□□□ -1.8
YBX3-209ENST00000540747 DSCR10P59022 87 aa3.78□□□□□ -1.8
YBX3-209ENST00000540747 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
YBX3-209ENST00000540747 A0A087WSZ3 146 aa3.77□□□□□ -1.81
YBX3-209ENST00000540747 HCG22E2RYF7 251 aa3.77□□□□□ -1.81
YBX3-209ENST00000540747 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
YBX3-209ENST00000540747 K7EQZ3 153 aa3.76□□□□□ -1.81
YBX3-209ENST00000540747 C5orf47Q569G3 176 aa3.76□□□□□ -1.81
YBX3-209ENST00000540747 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
YBX3-209ENST00000540747 LCE2BO14633 110 aa3.75□□□□□ -1.81
YBX3-209ENST00000540747 DEFB116Q30KQ4 102 aa3.75□□□□□ -1.81
YBX3-209ENST00000540747 Q75L30 129 aa3.75□□□□□ -1.81
YBX3-209ENST00000540747 NDUFB1O75438 58 aa3.74□□□□□ -1.81
YBX3-209ENST00000540747 MT2AP02795 61 aa3.74□□□□□ -1.81
YBX3-209ENST00000540747 MP68P56378 58 aa3.74□□□□□ -1.81
YBX3-209ENST00000540747 WFDC13Q8IUB5 93 aa3.74□□□□□ -1.81
YBX3-209ENST00000540747 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
YBX3-209ENST00000540747 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
YBX3-209ENST00000540747 A8MWP4 228 aa3.72□□□□□ -1.81
YBX3-209ENST00000540747 CASC2Q6XLA1 102 aa3.72□□□□□ -1.81
YBX3-209ENST00000540747 PRR15Q8IV56 129 aa3.72□□□□□ -1.81
YBX3-209ENST00000540747 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
YBX3-209ENST00000540747 MT1FP04733 61 aa3.71□□□□□ -1.82
YBX3-209ENST00000540747 LINC00472Q9H8W2 130 aa3.71□□□□□ -1.82
YBX3-209ENST00000540747 H3BPC8 53 aa3.7□□□□□ -1.82
YBX3-209ENST00000540747 C4orf26Q17RF5 130 aa3.7□□□□□ -1.82
YBX3-209ENST00000540747 ATP11AUNQ6ZP68 121 aa3.7□□□□□ -1.82
YBX3-209ENST00000540747 ZCCHC13Q8WW36 166 aaKnown RBP3.69□□□□□ -1.82
YBX3-209ENST00000540747 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
YBX3-209ENST00000540747 hDV103S1A0JD37 113 aa3.68□□□□□ -1.82
YBX3-209ENST00000540747 H0Y9P7 68 aa3.68□□□□□ -1.82
YBX3-209ENST00000540747 LINC00208Q96KT6 92 aa3.68□□□□□ -1.82
YBX3-209ENST00000540747 A8MUU9 505 aa3.67□□□□□ -1.82
YBX3-209ENST00000540747 MPLKIPQ8TAP9 179 aa3.66□□□□□ -1.82
YBX3-209ENST00000540747 TRAV22A0A0B4J277 110 aa3.65□□□□□ -1.83
YBX3-209ENST00000540747 MMP24-AS1A0A0U1RRL7 71 aa3.65□□□□□ -1.83
YBX3-209ENST00000540747 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.83
YBX3-209ENST00000540747 C1orf64Q8NEQ6 169 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms