RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 IGKV4-1P06312 121 aa9.1□□□□□ -0.95
UBC-208ENST00000540700 XP32Q5T750 250 aa9.1□□□□□ -0.95
UBC-208ENST00000540700 C21orf62-AS1Q17RA5 79 aa9.08□□□□□ -0.96
UBC-208ENST00000540700 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
UBC-208ENST00000540700 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
UBC-208ENST00000540700 LINC00846Q9NV44 126 aa9.04□□□□□ -0.96
UBC-208ENST00000540700 DSCR10P59022 87 aa9.03□□□□□ -0.96
UBC-208ENST00000540700 NREPQ16612 68 aa9.03□□□□□ -0.96
UBC-208ENST00000540700 Q6ZVQ6 151 aa9.01□□□□□ -0.97
UBC-208ENST00000540700 IGHV6-1A0A0B4J1U7 121 aa8.98□□□□□ -0.97
UBC-208ENST00000540700 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
UBC-208ENST00000540700 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
UBC-208ENST00000540700 J3KT08 172 aa8.98□□□□□ -0.97
UBC-208ENST00000540700 KRTAP16-1A8MUX0 517 aa8.97□□□□□ -0.97
UBC-208ENST00000540700 KRTAP4-1Q9BYQ7 146 aa8.96□□□□□ -0.98
UBC-208ENST00000540700 A8MWP4 228 aa8.95□□□□□ -0.98
UBC-208ENST00000540700 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
UBC-208ENST00000540700 LINC00313P59037 77 aa8.93□□□□□ -0.98
UBC-208ENST00000540700 K7EQZ3 153 aa8.91□□□□□ -0.98
UBC-208ENST00000540700 BPY2O14599 106 aa8.91□□□□□ -0.98
UBC-208ENST00000540700 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
UBC-208ENST00000540700 PRR15Q8IV56 129 aa8.9□□□□□ -0.98
UBC-208ENST00000540700 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
UBC-208ENST00000540700 A8MUU9 505 aa8.89□□□□□ -0.99
UBC-208ENST00000540700 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
UBC-208ENST00000540700 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
UBC-208ENST00000540700 Q75L30 129 aa8.89□□□□□ -0.99
UBC-208ENST00000540700 Q8N9L7 120 aa8.89□□□□□ -0.99
UBC-208ENST00000540700 NDUFB1O75438 58 aa8.88□□□□□ -0.99
UBC-208ENST00000540700 C8orf17Q9NRJ1 99 aa8.88□□□□□ -0.99
UBC-208ENST00000540700 FAM240AA0A1B0GVK7 77 aa8.87□□□□□ -0.99
UBC-208ENST00000540700 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
UBC-208ENST00000540700 MMP24-AS1A0A0U1RRL7 71 aa8.86□□□□□ -0.99
UBC-208ENST00000540700 ACYP1P07311 99 aa8.84□□□□□ -0.99
UBC-208ENST00000540700 LCE2CQ5TA81 110 aa8.8□□□□□ -1
UBC-208ENST00000540700 CXCL6P80162 114 aa8.78□□□□□ -1
UBC-208ENST00000540700 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
UBC-208ENST00000540700 hDV103S1A0JD37 113 aa8.75□□□□□ -1.01
UBC-208ENST00000540700 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
UBC-208ENST00000540700 MT1HP80294 61 aa8.74□□□□□ -1.01
UBC-208ENST00000540700 ATP11AUNQ6ZP68 121 aa8.74□□□□□ -1.01
UBC-208ENST00000540700 WFDC13Q8IUB5 93 aa8.74□□□□□ -1.01
UBC-208ENST00000540700 MRPL34Q9BQ48 92 aaKnown RBP8.74□□□□□ -1.01
UBC-208ENST00000540700 J3QR89 54 aa8.7□□□□□ -1.02
UBC-208ENST00000540700 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
UBC-208ENST00000540700 KRTAP19-2Q3LHN2 52 aa8.69□□□□□ -1.02
UBC-208ENST00000540700 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
UBC-208ENST00000540700 LINC00643Q86TS7 51 aa8.69□□□□□ -1.02
UBC-208ENST00000540700 ATP5EP2Q5VTU8 51 aa8.68□□□□□ -1.02
UBC-208ENST00000540700 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
UBC-208ENST00000540700 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
UBC-208ENST00000540700 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
UBC-208ENST00000540700 NDUFS5O43920 106 aa8.62□□□□□ -1.03
UBC-208ENST00000540700 A0A087WVE0 104 aa8.61□□□□□ -1.03
UBC-208ENST00000540700 Q5W150 140 aa8.61□□□□□ -1.03
UBC-208ENST00000540700 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
UBC-208ENST00000540700 K7ERU9 68 aa8.6□□□□□ -1.03
UBC-208ENST00000540700 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
UBC-208ENST00000540700 M0R2T5 61 aa8.59□□□□□ -1.03
UBC-208ENST00000540700 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
UBC-208ENST00000540700 HRES1P13985 223 aa8.53□□□□□ -1.04
UBC-208ENST00000540700 FLGP20930 4061 aaPredicted RBP8.52□□□□□ -1.05
UBC-208ENST00000540700 MT-ATP8P03928 68 aa8.52□□□□□ -1.05
UBC-208ENST00000540700 SPINK7P58062 85 aa8.51□□□□□ -1.05
UBC-208ENST00000540700 MPLKIPQ8TAP9 179 aa8.48□□□□□ -1.05
UBC-208ENST00000540700 SSPOA2VEC9 5147 aa8.47□□□□□ -1.05
UBC-208ENST00000540700 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
UBC-208ENST00000540700 USH2AO75445 5202 aa8.44□□□□□ -1.06
UBC-208ENST00000540700 TP53AIP1Q9HCN2 124 aa8.44□□□□□ -1.06
UBC-208ENST00000540700 IGKV2D-30A0A075B6S6 120 aa8.42□□□□□ -1.06
UBC-208ENST00000540700 IGKV2-30P06310 120 aa8.42□□□□□ -1.06
UBC-208ENST00000540700 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
UBC-208ENST00000540700 C7orf65Q6ZTY9 151 aa8.38□□□□□ -1.07
UBC-208ENST00000540700 OCR1Q9BZK8 76 aa8.38□□□□□ -1.07
UBC-208ENST00000540700 UQCRQO14949 82 aa8.35□□□□□ -1.07
UBC-208ENST00000540700 TRAV22A0A0B4J277 110 aa8.34□□□□□ -1.07
UBC-208ENST00000540700 SYNE2Q8WXH0 6885 aaKnown RBP8.32□□□□□ -1.08
UBC-208ENST00000540700 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
UBC-208ENST00000540700 FCGBPQ9Y6R7 5405 aaPredicted RBP8.32□□□□□ -1.08
UBC-208ENST00000540700 FAM236AA0A1B0GUQ0 79 aa8.3□□□□□ -1.08
UBC-208ENST00000540700 FAM236BA0A1B0GV22 79 aa8.3□□□□□ -1.08
UBC-208ENST00000540700 H0Y9P7 68 aa8.3□□□□□ -1.08
UBC-208ENST00000540700 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
UBC-208ENST00000540700 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
UBC-208ENST00000540700 CYP4F30PQ9H0H9 118 aa8.27□□□□□ -1.09
UBC-208ENST00000540700 SCGB1A1P11684 91 aa8.25□□□□□ -1.09
UBC-208ENST00000540700 C4orf26Q17RF5 130 aa8.25□□□□□ -1.09
UBC-208ENST00000540700 LOC101927531A0A1B0GV80 90 aa8.23□□□□□ -1.09
UBC-208ENST00000540700 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
UBC-208ENST00000540700 MACF1Q9UPN3 7388 aaKnown RBP8.21□□□□□ -1.09
UBC-208ENST00000540700 ATOX1O00244 68 aa8.21□□□□□ -1.1
UBC-208ENST00000540700 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
UBC-208ENST00000540700 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
UBC-208ENST00000540700 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
UBC-208ENST00000540700 KLKP1Q107X0 134 aa8.17□□□□□ -1.1
UBC-208ENST00000540700 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
UBC-208ENST00000540700 MP68P56378 58 aa8.16□□□□□ -1.1
UBC-208ENST00000540700 TRAV7A0A075B6U4 112 aa8.15□□□□□ -1.1
UBC-208ENST00000540700 H1FX-AS1Q4G0G2 97 aa8.14□□□□□ -1.11
UBC-208ENST00000540700 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms