RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
CDCA3-208ENST00000540683 C9JAW5 83 aa5.4□□□□□ -1.54
CDCA3-208ENST00000540683 JMJD7-PLA2G4BH0Y9G9 81 aa5.4□□□□□ -1.54
CDCA3-208ENST00000540683 PDE6GP18545 87 aa5.4□□□□□ -1.54
CDCA3-208ENST00000540683 VPS25Q9BRG1 176 aa5.4□□□□□ -1.54
CDCA3-208ENST00000540683 NDUFB1O75438 58 aa5.39□□□□□ -1.55
CDCA3-208ENST00000540683 DSCR10P59022 87 aa5.39□□□□□ -1.55
CDCA3-208ENST00000540683 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
CDCA3-208ENST00000540683 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
CDCA3-208ENST00000540683 A0A1B0GV72 72 aa5.38□□□□□ -1.55
CDCA3-208ENST00000540683 BAALC-AS2P0C853 105 aa5.38□□□□□ -1.55
CDCA3-208ENST00000540683 ATXN8Q156A1 80 aa5.38□□□□□ -1.55
CDCA3-208ENST00000540683 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
CDCA3-208ENST00000540683 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
CDCA3-208ENST00000540683 MTURNQ8N3F0 131 aa5.37□□□□□ -1.55
CDCA3-208ENST00000540683 FAM236DA0A1B0GTK5 79 aa5.35□□□□□ -1.55
CDCA3-208ENST00000540683 A0A1B0GVX0 72 aa5.35□□□□□ -1.55
CDCA3-208ENST00000540683 FAM236CP0DP71 79 aa5.35□□□□□ -1.55
CDCA3-208ENST00000540683 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
CDCA3-208ENST00000540683 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
CDCA3-208ENST00000540683 SMIM6P0DI80 62 aa5.33□□□□□ -1.56
CDCA3-208ENST00000540683 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
CDCA3-208ENST00000540683 LOC105371267A0A1B0GV96 52 aa5.32□□□□□ -1.56
CDCA3-208ENST00000540683 DEFB116Q30KQ4 102 aa5.32□□□□□ -1.56
CDCA3-208ENST00000540683 Q6ZQT0 140 aa5.32□□□□□ -1.56
CDCA3-208ENST00000540683 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
CDCA3-208ENST00000540683 FLGP20930 4061 aaPredicted RBP5.32□□□□□ -1.56
CDCA3-208ENST00000540683 KRTAP16-1A8MUX0 517 aa5.31□□□□□ -1.56
CDCA3-208ENST00000540683 TSTD3H0UI37 97 aa5.31□□□□□ -1.56
CDCA3-208ENST00000540683 A8MWP4 228 aa5.28□□□□□ -1.56
CDCA3-208ENST00000540683 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
CDCA3-208ENST00000540683 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
CDCA3-208ENST00000540683 NREPQ16612 68 aa5.26□□□□□ -1.57
CDCA3-208ENST00000540683 NOTCH2NLQ7Z3S9 236 aa5.25□□□□□ -1.57
CDCA3-208ENST00000540683 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
CDCA3-208ENST00000540683 BATFQ16520 125 aa5.24□□□□□ -1.57
CDCA3-208ENST00000540683 H3BT86 120 aa5.23□□□□□ -1.57
CDCA3-208ENST00000540683 C14orf132Q9NPU4 83 aa5.23□□□□□ -1.57
CDCA3-208ENST00000540683 C8orf17Q9NRJ1 99 aa5.23□□□□□ -1.57
CDCA3-208ENST00000540683 HRES1P13985 223 aa5.22□□□□□ -1.57
CDCA3-208ENST00000540683 SPINK7P58062 85 aa5.21□□□□□ -1.58
CDCA3-208ENST00000540683 Q6ZVQ6 151 aa5.21□□□□□ -1.58
CDCA3-208ENST00000540683 PRR15Q8IV56 129 aa5.21□□□□□ -1.58
CDCA3-208ENST00000540683 NAA38Q9BRA0 125 aaKnown RBP5.21□□□□□ -1.58
CDCA3-208ENST00000540683 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
CDCA3-208ENST00000540683 TMEM254Q8TBM7 123 aa5.19□□□□□ -1.58
CDCA3-208ENST00000540683 A0A1W2PPM0 123 aa5.17□□□□□ -1.58
CDCA3-208ENST00000540683 WFDC13Q8IUB5 93 aa5.17□□□□□ -1.58
CDCA3-208ENST00000540683 MRPL34Q9BQ48 92 aaKnown RBP5.17□□□□□ -1.58
CDCA3-208ENST00000540683 hDV103S1A0JD37 113 aa5.16□□□□□ -1.58
CDCA3-208ENST00000540683 BPY2O14599 106 aa5.16□□□□□ -1.58
CDCA3-208ENST00000540683 NDUFS5O43920 106 aa5.15□□□□□ -1.59
CDCA3-208ENST00000540683 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
CDCA3-208ENST00000540683 MMP24-AS1A0A0U1RRL7 71 aa5.12□□□□□ -1.59
CDCA3-208ENST00000540683 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
CDCA3-208ENST00000540683 LINC00846Q9NV44 126 aa5.12□□□□□ -1.59
CDCA3-208ENST00000540683 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
CDCA3-208ENST00000540683 TAX1BP3O14907 124 aa5.1□□□□□ -1.59
CDCA3-208ENST00000540683 UBL5Q9BZL1 73 aa5.1□□□□□ -1.59
CDCA3-208ENST00000540683 SPCS1Q9Y6A9 102 aa5.1□□□□□ -1.59
CDCA3-208ENST00000540683 K7EQZ3 153 aa5.09□□□□□ -1.59
CDCA3-208ENST00000540683 C7orf65Q6ZTY9 151 aa5.09□□□□□ -1.59
CDCA3-208ENST00000540683 MT2AP02795 61 aa5.08□□□□□ -1.6
CDCA3-208ENST00000540683 COL5A1-AS1Q5SY13 56 aa5.08□□□□□ -1.6
CDCA3-208ENST00000540683 CASC2Q6XLA1 102 aa5.08□□□□□ -1.6
CDCA3-208ENST00000540683 CXCL6P80162 114 aa5.07□□□□□ -1.6
CDCA3-208ENST00000540683 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
CDCA3-208ENST00000540683 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
CDCA3-208ENST00000540683 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
CDCA3-208ENST00000540683 IGKV2-30P06310 120 aa5.03□□□□□ -1.6
CDCA3-208ENST00000540683 GTF2H5Q6ZYL4 71 aa5.03□□□□□ -1.6
CDCA3-208ENST00000540683 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
CDCA3-208ENST00000540683 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
CDCA3-208ENST00000540683 MT1FP04733 61 aa5.02□□□□□ -1.61
CDCA3-208ENST00000540683 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
CDCA3-208ENST00000540683 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
CDCA3-208ENST00000540683 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
CDCA3-208ENST00000540683 TP53AIP1Q9HCN2 124 aa5□□□□□ -1.61
CDCA3-208ENST00000540683 K7EP34 96 aa4.99□□□□□ -1.61
CDCA3-208ENST00000540683 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
CDCA3-208ENST00000540683 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
CDCA3-208ENST00000540683 USH2AO75445 5202 aa4.98□□□□□ -1.61
CDCA3-208ENST00000540683 F8W1H4 67 aa4.97□□□□□ -1.61
CDCA3-208ENST00000540683 Q8N9L7 120 aa4.97□□□□□ -1.61
CDCA3-208ENST00000540683 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
CDCA3-208ENST00000540683 Q5W150 140 aa4.96□□□□□ -1.62
CDCA3-208ENST00000540683 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
CDCA3-208ENST00000540683 PRO0461Q9UI25 63 aa4.94□□□□□ -1.62
CDCA3-208ENST00000540683 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
CDCA3-208ENST00000540683 PCP4L1A6NKN8 68 aa4.92□□□□□ -1.62
CDCA3-208ENST00000540683 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
CDCA3-208ENST00000540683 ACYP1P07311 99 aa4.91□□□□□ -1.62
CDCA3-208ENST00000540683 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
CDCA3-208ENST00000540683 S4R3F8 94 aa4.89□□□□□ -1.63
CDCA3-208ENST00000540683 C1orf64Q8NEQ6 169 aa4.88□□□□□ -1.63
CDCA3-208ENST00000540683 FAM236AA0A1B0GUQ0 79 aa4.87□□□□□ -1.63
CDCA3-208ENST00000540683 FAM236BA0A1B0GV22 79 aa4.87□□□□□ -1.63
CDCA3-208ENST00000540683 ETDBQ3ZM63 59 aa4.87□□□□□ -1.63
CDCA3-208ENST00000540683 ATP5EP2Q5VTU8 51 aa4.87□□□□□ -1.63
CDCA3-208ENST00000540683 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms