RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 BSNQ9UPA5 3926 aa7.53□□□□□ -1.2
DNMT1-203ENST00000540357 UBR5O95071 2799 aaPredicted RBP7.53□□□□□ -1.2
DNMT1-203ENST00000540357 FBN2P35556 2912 aa7.52□□□□□ -1.2
DNMT1-203ENST00000540357 COL6A5A8TX70 2615 aa7.49□□□□□ -1.21
DNMT1-203ENST00000540357 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
DNMT1-203ENST00000540357 H1FX-AS1Q4G0G2 97 aa7.46□□□□□ -1.22
DNMT1-203ENST00000540357 A0A0D9SG42 100 aa7.45□□□□□ -1.22
DNMT1-203ENST00000540357 KMT2BQ9UMN6 2715 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-203ENST00000540357 NOTCH1P46531 2555 aa7.45□□□□□ -1.22
DNMT1-203ENST00000540357 NF1P21359 2839 aa7.44□□□□□ -1.22
DNMT1-203ENST00000540357 SVEP1Q4LDE5 3571 aa7.43□□□□□ -1.22
DNMT1-203ENST00000540357 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
DNMT1-203ENST00000540357 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
DNMT1-203ENST00000540357 ITPR2Q14571 2701 aa7.41□□□□□ -1.22
DNMT1-203ENST00000540357 CRYBG3Q68DQ2 2970 aa7.4□□□□□ -1.22
DNMT1-203ENST00000540357 NBEAL1Q6ZS30 2694 aa7.4□□□□□ -1.23
DNMT1-203ENST00000540357 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
DNMT1-203ENST00000540357 ROMO1P60602 79 aa7.37□□□□□ -1.23
DNMT1-203ENST00000540357 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
DNMT1-203ENST00000540357 CELSR2Q9HCU4 2923 aa7.37□□□□□ -1.23
DNMT1-203ENST00000540357 CELSR1Q9NYQ6 3014 aa7.36□□□□□ -1.23
DNMT1-203ENST00000540357 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
DNMT1-203ENST00000540357 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
DNMT1-203ENST00000540357 NSD1Q96L73 2696 aaPredicted RBP7.34□□□□□ -1.23
DNMT1-203ENST00000540357 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
DNMT1-203ENST00000540357 HIVEP1P15822 2718 aa7.34□□□□□ -1.23
DNMT1-203ENST00000540357 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
DNMT1-203ENST00000540357 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
DNMT1-203ENST00000540357 S4R3F8 94 aa7.28□□□□□ -1.24
DNMT1-203ENST00000540357 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
DNMT1-203ENST00000540357 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
DNMT1-203ENST00000540357 Q6ZSA8 131 aa7.18□□□□□ -1.26
DNMT1-203ENST00000540357 A8MUU9 505 aa7.18□□□□□ -1.26
DNMT1-203ENST00000540357 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
DNMT1-203ENST00000540357 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
DNMT1-203ENST00000540357 PDZD2O15018 2839 aa7.12□□□□□ -1.27
DNMT1-203ENST00000540357 H0YAA0 97 aa7.11□□□□□ -1.27
DNMT1-203ENST00000540357 ANK3Q12955 4377 aaKnown RBP7.11□□□□□ -1.27
DNMT1-203ENST00000540357 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
DNMT1-203ENST00000540357 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
DNMT1-203ENST00000540357 TENM4Q6N022 2769 aa7.05□□□□□ -1.28
DNMT1-203ENST00000540357 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
DNMT1-203ENST00000540357 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
DNMT1-203ENST00000540357 VWFP04275 2813 aa7.02□□□□□ -1.28
DNMT1-203ENST00000540357 TENM1Q9UKZ4 2725 aa7.02□□□□□ -1.29
DNMT1-203ENST00000540357 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
DNMT1-203ENST00000540357 R4GN34 69 aa6.96□□□□□ -1.29
DNMT1-203ENST00000540357 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.3
DNMT1-203ENST00000540357 VPS13CQ709C8 3753 aa6.94□□□□□ -1.3
DNMT1-203ENST00000540357 CSMD2Q7Z408 3487 aa6.94□□□□□ -1.3
DNMT1-203ENST00000540357 M0QZ58 72 aa6.93□□□□□ -1.3
DNMT1-203ENST00000540357 CUBNO60494 3623 aa6.92□□□□□ -1.3
DNMT1-203ENST00000540357 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
DNMT1-203ENST00000540357 NDUFAF8A1L188 74 aa6.9□□□□□ -1.31
DNMT1-203ENST00000540357 Q5VSD8 79 aa6.89□□□□□ -1.31
DNMT1-203ENST00000540357 AKAP9Q99996 3911 aa6.88□□□□□ -1.31
DNMT1-203ENST00000540357 NBPF19A0A087WUL8 3843 aa6.87□□□□□ -1.31
DNMT1-203ENST00000540357 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
DNMT1-203ENST00000540357 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
DNMT1-203ENST00000540357 TGP01266 2768 aa6.83□□□□□ -1.32
DNMT1-203ENST00000540357 PKD1L1Q8TDX9 2849 aa6.83□□□□□ -1.32
DNMT1-203ENST00000540357 M0R2T5 61 aa6.82□□□□□ -1.32
DNMT1-203ENST00000540357 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
DNMT1-203ENST00000540357 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
DNMT1-203ENST00000540357 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
DNMT1-203ENST00000540357 TRRAPQ9Y4A5 3859 aa6.77□□□□□ -1.33
DNMT1-203ENST00000540357 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
DNMT1-203ENST00000540357 XP32Q5T750 250 aa6.7□□□□□ -1.34
DNMT1-203ENST00000540357 SRRM2Q9UQ35 2752 aaKnown RBP6.7□□□□□ -1.34
DNMT1-203ENST00000540357 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
DNMT1-203ENST00000540357 HUWE1Q7Z6Z7 4374 aaKnown RBP6.66□□□□□ -1.34
DNMT1-203ENST00000540357 P0C880 135 aa6.65□□□□□ -1.34
DNMT1-203ENST00000540357 FBN1P35555 2871 aaKnown RBP6.63□□□□□ -1.35
DNMT1-203ENST00000540357 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
DNMT1-203ENST00000540357 TPRXLQ17RH7 258 aa6.59□□□□□ -1.36
DNMT1-203ENST00000540357 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
DNMT1-203ENST00000540357 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
DNMT1-203ENST00000540357 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
DNMT1-203ENST00000540357 TENM2Q9NT68 2774 aa6.51□□□□□ -1.37
DNMT1-203ENST00000540357 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
DNMT1-203ENST00000540357 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
DNMT1-203ENST00000540357 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
DNMT1-203ENST00000540357 A0A1B0GVY2 172 aa6.46□□□□□ -1.38
DNMT1-203ENST00000540357 MEGF8Q7Z7M0 2845 aa6.44□□□□□ -1.38
DNMT1-203ENST00000540357 FBN3Q75N90 2809 aa6.44□□□□□ -1.38
DNMT1-203ENST00000540357 TNP1P09430 55 aa6.43□□□□□ -1.38
DNMT1-203ENST00000540357 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
DNMT1-203ENST00000540357 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
DNMT1-203ENST00000540357 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
DNMT1-203ENST00000540357 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
DNMT1-203ENST00000540357 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
DNMT1-203ENST00000540357 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
DNMT1-203ENST00000540357 DNAH9Q9NYC9 4486 aa6.33□□□□□ -1.4
DNMT1-203ENST00000540357 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
DNMT1-203ENST00000540357 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
DNMT1-203ENST00000540357 CSMD3Q7Z407 3707 aa6.28□□□□□ -1.4
DNMT1-203ENST00000540357 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
DNMT1-203ENST00000540357 DNAH17Q9UFH2 4485 aa6.24□□□□□ -1.41
DNMT1-203ENST00000540357 COL7A1Q02388 2944 aa6.23□□□□□ -1.41
DNMT1-203ENST00000540357 VPS13DQ5THJ4 4388 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms