RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 APOBP04114 4563 aaKnown RBP10.16□□□□□ -0.78
COPS3-212ENST00000539941 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.78
COPS3-212ENST00000539941 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
COPS3-212ENST00000539941 ABCA13Q86UQ4 5058 aa10.13□□□□□ -0.79
COPS3-212ENST00000539941 PSPHP1O15172 72 aa10.12□□□□□ -0.79
COPS3-212ENST00000539941 H3BPC8 53 aa10.11□□□□□ -0.79
COPS3-212ENST00000539941 SPANXA2-OT1Q8N9U9 137 aa10.11□□□□□ -0.79
COPS3-212ENST00000539941 KRTAP4-5Q9BYR2 181 aa10.1□□□□□ -0.79
COPS3-212ENST00000539941 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
COPS3-212ENST00000539941 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
COPS3-212ENST00000539941 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
COPS3-212ENST00000539941 VPS13BQ7Z7G8 4022 aa10.09□□□□□ -0.79
COPS3-212ENST00000539941 MP68P56378 58 aa10.08□□□□□ -0.8
COPS3-212ENST00000539941 A8MUN3 132 aa10.07□□□□□ -0.8
COPS3-212ENST00000539941 Q5VV11 94 aa10.07□□□□□ -0.8
COPS3-212ENST00000539941 A0A0G2JQZ4 141 aa10.06□□□□□ -0.8
COPS3-212ENST00000539941 ANAPC11Q9NYG5 84 aa10.06□□□□□ -0.8
COPS3-212ENST00000539941 MOBPQ13875 183 aa10.05□□□□□ -0.8
COPS3-212ENST00000539941 HCG22E2RYF7 251 aa10.03□□□□□ -0.8
COPS3-212ENST00000539941 SPINK6Q6UWN8 80 aa10.03□□□□□ -0.8
COPS3-212ENST00000539941 CHKB-CPT1BH3BT56 60 aa10.02□□□□□ -0.81
COPS3-212ENST00000539941 SMR3BP02814 79 aaPredicted RBP10.02□□□□□ -0.81
COPS3-212ENST00000539941 A0A087WSZ3 146 aa10.01□□□□□ -0.81
COPS3-212ENST00000539941 Q75L30 129 aa10.01□□□□□ -0.81
COPS3-212ENST00000539941 SSBP3-AS1Q7Z2R9 100 aa10.01□□□□□ -0.81
COPS3-212ENST00000539941 LINC00208Q96KT6 92 aa10□□□□□ -0.81
COPS3-212ENST00000539941 RBM12B-AS1Q9P1G2 102 aa10□□□□□ -0.81
COPS3-212ENST00000539941 KRTAP1-4P0C5Y4 121 aa9.99□□□□□ -0.81
COPS3-212ENST00000539941 DSCR10P59022 87 aa9.99□□□□□ -0.81
COPS3-212ENST00000539941 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
COPS3-212ENST00000539941 Q8N1X5 172 aa9.98□□□□□ -0.81
COPS3-212ENST00000539941 LOC101927531A0A1B0GV80 90 aa9.97□□□□□ -0.81
COPS3-212ENST00000539941 FAT1Q14517 4588 aa9.97□□□□□ -0.81
COPS3-212ENST00000539941 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
COPS3-212ENST00000539941 A0A087X002 238 aa9.94□□□□□ -0.82
COPS3-212ENST00000539941 PRR15LQ9BU68 103 aa9.93□□□□□ -0.82
COPS3-212ENST00000539941 K7EQZ3 153 aa9.93□□□□□ -0.82
COPS3-212ENST00000539941 KRTAP13-2Q52LG2 175 aa9.93□□□□□ -0.82
COPS3-212ENST00000539941 A6NN06 94 aa9.92□□□□□ -0.82
COPS3-212ENST00000539941 PLA2G1BP04054 148 aaKnown RBP9.92□□□□□ -0.82
COPS3-212ENST00000539941 CDC42SE1Q9NRR8 79 aa9.92□□□□□ -0.82
COPS3-212ENST00000539941 C7orf65Q6ZTY9 151 aa9.91□□□□□ -0.82
COPS3-212ENST00000539941 FAM229AH3BQW9 127 aa9.9□□□□□ -0.82
COPS3-212ENST00000539941 LINC00472Q9H8W2 130 aa9.89□□□□□ -0.83
COPS3-212ENST00000539941 A6NED7 52 aa9.88□□□□□ -0.83
COPS3-212ENST00000539941 PRR4Q16378 134 aa9.88□□□□□ -0.83
COPS3-212ENST00000539941 SPTSSBQ8NFR3 76 aa9.87□□□□□ -0.83
COPS3-212ENST00000539941 H0Y9P7 68 aa9.84□□□□□ -0.83
COPS3-212ENST00000539941 TYMSOSQ8TAI1 123 aa9.84□□□□□ -0.83
COPS3-212ENST00000539941 PKHD1L1Q86WI1 4243 aa9.84□□□□□ -0.83
COPS3-212ENST00000539941 LCA10Q71F78 164 aa9.83□□□□□ -0.84
COPS3-212ENST00000539941 Q96NJ1 140 aa9.82□□□□□ -0.84
COPS3-212ENST00000539941 DEFB116Q30KQ4 102 aa9.81□□□□□ -0.84
COPS3-212ENST00000539941 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
COPS3-212ENST00000539941 KRTAP29-1A8MX34 341 aaPredicted RBP9.8□□□□□ -0.84
COPS3-212ENST00000539941 Q5VSD8 79 aa9.8□□□□□ -0.84
COPS3-212ENST00000539941 LINC01558Q9Y6Z2 57 aa9.8□□□□□ -0.84
COPS3-212ENST00000539941 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
COPS3-212ENST00000539941 A8MWP4 228 aa9.79□□□□□ -0.84
COPS3-212ENST00000539941 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
COPS3-212ENST00000539941 COA5Q86WW8 74 aa9.78□□□□□ -0.84
COPS3-212ENST00000539941 A8MU10 97 aa9.77□□□□□ -0.84
COPS3-212ENST00000539941 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.84
COPS3-212ENST00000539941 CASC2Q6XLA1 102 aa9.76□□□□□ -0.85
COPS3-212ENST00000539941 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
COPS3-212ENST00000539941 SPINK1P00995 79 aa9.75□□□□□ -0.85
COPS3-212ENST00000539941 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
COPS3-212ENST00000539941 HERC1Q15751 4861 aa9.75□□□□□ -0.85
COPS3-212ENST00000539941 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
COPS3-212ENST00000539941 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
COPS3-212ENST00000539941 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
COPS3-212ENST00000539941 FLG2Q5D862 2391 aaPredicted RBP9.69□□□□□ -0.86
COPS3-212ENST00000539941 TP53AIP1Q9HCN2 124 aa9.67□□□□□ -0.86
COPS3-212ENST00000539941 A0A1B0GVX0 72 aa9.67□□□□□ -0.86
COPS3-212ENST00000539941 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
COPS3-212ENST00000539941 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
COPS3-212ENST00000539941 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
COPS3-212ENST00000539941 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
COPS3-212ENST00000539941 C8orf17Q9NRJ1 99 aa9.61□□□□□ -0.87
COPS3-212ENST00000539941 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
COPS3-212ENST00000539941 LRP1Q07954 4544 aaKnown RBP9.57□□□□□ -0.88
COPS3-212ENST00000539941 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
COPS3-212ENST00000539941 TNXBP22105 4242 aa9.53□□□□□ -0.88
COPS3-212ENST00000539941 SPINK7P58062 85 aa9.51□□□□□ -0.89
COPS3-212ENST00000539941 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
COPS3-212ENST00000539941 LINC00313P59037 77 aa9.5□□□□□ -0.89
COPS3-212ENST00000539941 MRPL34Q9BQ48 92 aaKnown RBP9.5□□□□□ -0.89
COPS3-212ENST00000539941 J3QL48 77 aa9.48□□□□□ -0.89
COPS3-212ENST00000539941 LINC01554Q52M75 96 aa9.47□□□□□ -0.89
COPS3-212ENST00000539941 HRES1P13985 223 aa9.46□□□□□ -0.89
COPS3-212ENST00000539941 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
COPS3-212ENST00000539941 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
COPS3-212ENST00000539941 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
COPS3-212ENST00000539941 RETNLBQ9BQ08 111 aa9.36□□□□□ -0.91
COPS3-212ENST00000539941 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
COPS3-212ENST00000539941 ACYP2P14621 99 aa9.36□□□□□ -0.91
COPS3-212ENST00000539941 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
COPS3-212ENST00000539941 H3BS24 57 aa9.33□□□□□ -0.92
COPS3-212ENST00000539941 PRAC1Q96KF2 57 aa9.29□□□□□ -0.92
COPS3-212ENST00000539941 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms