RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 HRES1P13985 223 aa7.65□□□□□ -1.18
UBE3B-211ENST00000539843 NOTCH2NLQ7Z3S9 236 aa7.65□□□□□ -1.18
UBE3B-211ENST00000539843 UQCR10Q9UDW1 63 aa7.64□□□□□ -1.19
UBE3B-211ENST00000539843 NDUFB1O75438 58 aa7.63□□□□□ -1.19
UBE3B-211ENST00000539843 C9JAW5 83 aa7.62□□□□□ -1.19
UBE3B-211ENST00000539843 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
UBE3B-211ENST00000539843 PYY3Q5JQD4 70 aa7.61□□□□□ -1.19
UBE3B-211ENST00000539843 MT2AP02795 61 aa7.6□□□□□ -1.19
UBE3B-211ENST00000539843 LYRM7Q5U5X0 104 aa7.6□□□□□ -1.19
UBE3B-211ENST00000539843 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
UBE3B-211ENST00000539843 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
UBE3B-211ENST00000539843 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
UBE3B-211ENST00000539843 LCE2BO14633 110 aa7.58□□□□□ -1.2
UBE3B-211ENST00000539843 BAALC-AS2P0C853 105 aa7.57□□□□□ -1.2
UBE3B-211ENST00000539843 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
UBE3B-211ENST00000539843 SPINK7P58062 85 aa7.56□□□□□ -1.2
UBE3B-211ENST00000539843 JMJD7-PLA2G4BH0Y9G9 81 aa7.55□□□□□ -1.2
UBE3B-211ENST00000539843 A0A1B0GW54 56 aa7.54□□□□□ -1.2
UBE3B-211ENST00000539843 Q6ZQT0 140 aa7.54□□□□□ -1.2
UBE3B-211ENST00000539843 MT1FP04733 61 aa7.53□□□□□ -1.2
UBE3B-211ENST00000539843 LINC00846Q9NV44 126 aa7.53□□□□□ -1.2
UBE3B-211ENST00000539843 USH2AO75445 5202 aa7.52□□□□□ -1.21
UBE3B-211ENST00000539843 PDE6GP18545 87 aa7.52□□□□□ -1.21
UBE3B-211ENST00000539843 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
UBE3B-211ENST00000539843 A8MWP4 228 aa7.5□□□□□ -1.21
UBE3B-211ENST00000539843 Q8N9P0 234 aaPredicted RBP7.5□□□□□ -1.21
UBE3B-211ENST00000539843 WFDC13Q8IUB5 93 aa7.49□□□□□ -1.21
UBE3B-211ENST00000539843 C8orf17Q9NRJ1 99 aa7.49□□□□□ -1.21
UBE3B-211ENST00000539843 SSPOA2VEC9 5147 aa7.48□□□□□ -1.21
UBE3B-211ENST00000539843 M0R143 59 aa7.48□□□□□ -1.21
UBE3B-211ENST00000539843 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
UBE3B-211ENST00000539843 LOC110117498A0A087WWA1 95 aa7.46□□□□□ -1.22
UBE3B-211ENST00000539843 Q6ZVQ6 151 aa7.45□□□□□ -1.22
UBE3B-211ENST00000539843 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
UBE3B-211ENST00000539843 TMA7Q9Y2S6 64 aaKnown RBP7.45□□□□□ -1.22
UBE3B-211ENST00000539843 NREPQ16612 68 aa7.43□□□□□ -1.22
UBE3B-211ENST00000539843 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
UBE3B-211ENST00000539843 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
UBE3B-211ENST00000539843 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
UBE3B-211ENST00000539843 NDUFS5O43920 106 aa7.38□□□□□ -1.23
UBE3B-211ENST00000539843 TMEM254Q8TBM7 123 aa7.38□□□□□ -1.23
UBE3B-211ENST00000539843 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
UBE3B-211ENST00000539843 NAA38Q9BRA0 125 aaKnown RBP7.38□□□□□ -1.23
UBE3B-211ENST00000539843 FCGBPQ9Y6R7 5405 aaPredicted RBP7.35□□□□□ -1.23
UBE3B-211ENST00000539843 hDV103S1A0JD37 113 aa7.34□□□□□ -1.23
UBE3B-211ENST00000539843 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
UBE3B-211ENST00000539843 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
UBE3B-211ENST00000539843 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
UBE3B-211ENST00000539843 K7EQZ3 153 aa7.28□□□□□ -1.24
UBE3B-211ENST00000539843 BPY2O14599 106 aa7.28□□□□□ -1.24
UBE3B-211ENST00000539843 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
UBE3B-211ENST00000539843 KRTAP19-6Q3LI70 58 aa7.28□□□□□ -1.24
UBE3B-211ENST00000539843 C7orf65Q6ZTY9 151 aa7.28□□□□□ -1.24
UBE3B-211ENST00000539843 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
UBE3B-211ENST00000539843 H3BT86 120 aa7.26□□□□□ -1.25
UBE3B-211ENST00000539843 BATFQ16520 125 aa7.26□□□□□ -1.25
UBE3B-211ENST00000539843 TSTD3H0UI37 97 aa7.25□□□□□ -1.25
UBE3B-211ENST00000539843 SMIM6P0DI80 62 aa7.24□□□□□ -1.25
UBE3B-211ENST00000539843 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
UBE3B-211ENST00000539843 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
UBE3B-211ENST00000539843 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
UBE3B-211ENST00000539843 C9orf118A6NHY6 69 aa7.17□□□□□ -1.26
UBE3B-211ENST00000539843 CXCL6P80162 114 aa7.16□□□□□ -1.26
UBE3B-211ENST00000539843 A0A1W2PPM0 123 aa7.15□□□□□ -1.26
UBE3B-211ENST00000539843 Q5W150 140 aa7.14□□□□□ -1.27
UBE3B-211ENST00000539843 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
UBE3B-211ENST00000539843 FAM236AA0A1B0GUQ0 79 aa7.13□□□□□ -1.27
UBE3B-211ENST00000539843 FAM236BA0A1B0GV22 79 aa7.13□□□□□ -1.27
UBE3B-211ENST00000539843 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
UBE3B-211ENST00000539843 C4orf26Q17RF5 130 aa7.12□□□□□ -1.27
UBE3B-211ENST00000539843 Q8N9L7 120 aa7.12□□□□□ -1.27
UBE3B-211ENST00000539843 UBL5Q9BZL1 73 aa7.1□□□□□ -1.27
UBE3B-211ENST00000539843 TAX1BP3O14907 124 aa7.08□□□□□ -1.28
UBE3B-211ENST00000539843 SPCS1Q9Y6A9 102 aa7.07□□□□□ -1.28
UBE3B-211ENST00000539843 KRTAP6-3Q3LI67 103 aa7.06□□□□□ -1.28
UBE3B-211ENST00000539843 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
UBE3B-211ENST00000539843 S4R3F8 94 aa7.05□□□□□ -1.28
UBE3B-211ENST00000539843 CSAG1Q6PB30 78 aa7.04□□□□□ -1.28
UBE3B-211ENST00000539843 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
UBE3B-211ENST00000539843 TP53AIP1Q9HCN2 124 aa7□□□□□ -1.29
UBE3B-211ENST00000539843 A6NN06 94 aa6.98□□□□□ -1.29
UBE3B-211ENST00000539843 Q5VV11 94 aa6.98□□□□□ -1.29
UBE3B-211ENST00000539843 SMCPP49901 116 aaPredicted RBP6.94□□□□□ -1.3
UBE3B-211ENST00000539843 LCA10Q71F78 164 aa6.93□□□□□ -1.3
UBE3B-211ENST00000539843 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
UBE3B-211ENST00000539843 KRTAP3-1Q9BYR8 98 aa6.91□□□□□ -1.3
UBE3B-211ENST00000539843 K7EP34 96 aa6.88□□□□□ -1.31
UBE3B-211ENST00000539843 KLKP1Q107X0 134 aa6.88□□□□□ -1.31
UBE3B-211ENST00000539843 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
UBE3B-211ENST00000539843 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
UBE3B-211ENST00000539843 MT1BP07438 61 aa6.85□□□□□ -1.31
UBE3B-211ENST00000539843 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
UBE3B-211ENST00000539843 GTF2H5Q6ZYL4 71 aa6.85□□□□□ -1.31
UBE3B-211ENST00000539843 LOC105371267A0A1B0GV96 52 aa6.83□□□□□ -1.32
UBE3B-211ENST00000539843 IMUPQ9GZP8 106 aa6.83□□□□□ -1.32
UBE3B-211ENST00000539843 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
UBE3B-211ENST00000539843 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
UBE3B-211ENST00000539843 LOC101927531A0A1B0GV80 90 aa6.8□□□□□ -1.32
UBE3B-211ENST00000539843 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
UBE3B-211ENST00000539843 NEBP20929 6669 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms