RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MMP24-AS1A0A0U1RRL7 71 aa12.96□□□□□ -0.33
HOMER3-204ENST00000539827 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.34
HOMER3-204ENST00000539827 ASB16-AS1Q495Z4 193 aa12.95□□□□□ -0.34
HOMER3-204ENST00000539827 A0A1B0GVX0 72 aa12.94□□□□□ -0.34
HOMER3-204ENST00000539827 C4orf48Q5BLP8 95 aa12.93□□□□□ -0.34
HOMER3-204ENST00000539827 SERP1Q9Y6X1 66 aa12.93□□□□□ -0.34
HOMER3-204ENST00000539827 C8orf17Q9NRJ1 99 aa12.92□□□□□ -0.34
HOMER3-204ENST00000539827 Q5XG85 94 aa12.9□□□□□ -0.34
HOMER3-204ENST00000539827 FAM229AH3BQW9 127 aa12.9□□□□□ -0.34
HOMER3-204ENST00000539827 hDV103S1A0JD37 113 aa12.89□□□□□ -0.35
HOMER3-204ENST00000539827 C1orf195Q5TG92 126 aa12.89□□□□□ -0.35
HOMER3-204ENST00000539827 LIMD2Q9BT23 127 aa12.88□□□□□ -0.35
HOMER3-204ENST00000539827 C5orf47Q569G3 176 aa12.87□□□□□ -0.35
HOMER3-204ENST00000539827 NOTCH2NLQ7Z3S9 236 aa12.87□□□□□ -0.35
HOMER3-204ENST00000539827 LINC00304Q8N9R0 145 aa12.86□□□□□ -0.35
HOMER3-204ENST00000539827 OXTP01178 125 aa12.85□□□□□ -0.35
HOMER3-204ENST00000539827 SPINK1P00995 79 aa12.84□□□□□ -0.35
HOMER3-204ENST00000539827 PKHD1L1Q86WI1 4243 aa12.84□□□□□ -0.35
HOMER3-204ENST00000539827 HSPG2P98160 4391 aa12.83□□□□□ -0.36
HOMER3-204ENST00000539827 Q5VSD8 79 aa12.83□□□□□ -0.36
HOMER3-204ENST00000539827 RYR1P21817 5038 aa12.8□□□□□ -0.36
HOMER3-204ENST00000539827 ZCCHC13Q8WW36 166 aaKnown RBP12.78□□□□□ -0.36
HOMER3-204ENST00000539827 SPAG11AQ6PDA7 123 aa12.77□□□□□ -0.37
HOMER3-204ENST00000539827 MP68P56378 58 aa12.76□□□□□ -0.37
HOMER3-204ENST00000539827 KRTAP17-1Q9BYP8 105 aa12.76□□□□□ -0.37
HOMER3-204ENST00000539827 MRPL34Q9BQ48 92 aaKnown RBP12.75□□□□□ -0.37
HOMER3-204ENST00000539827 KIAA1109Q2LD37 5005 aa12.75□□□□□ -0.37
HOMER3-204ENST00000539827 NDUFS5O43920 106 aa12.72□□□□□ -0.37
HOMER3-204ENST00000539827 C8orf87E5RJ46 101 aa12.72□□□□□ -0.37
HOMER3-204ENST00000539827 H3BPC8 53 aa12.71□□□□□ -0.37
HOMER3-204ENST00000539827 RPS29P62273 56 aaKnown RBP12.71□□□□□ -0.37
HOMER3-204ENST00000539827 BIRC6Q9NR09 4857 aa12.7□□□□□ -0.38
HOMER3-204ENST00000539827 LINC00313P59037 77 aa12.69□□□□□ -0.38
HOMER3-204ENST00000539827 SMIM26A0A096LP01 95 aa12.68□□□□□ -0.38
HOMER3-204ENST00000539827 H0Y9P7 68 aa12.68□□□□□ -0.38
HOMER3-204ENST00000539827 TP53AIP1Q9HCN2 124 aa12.65□□□□□ -0.38
HOMER3-204ENST00000539827 SVIPQ8NHG7 77 aa12.63□□□□□ -0.39
HOMER3-204ENST00000539827 LINC00208Q96KT6 92 aa12.63□□□□□ -0.39
HOMER3-204ENST00000539827 TRAV22A0A0B4J277 110 aa12.61□□□□□ -0.39
HOMER3-204ENST00000539827 Q8N1X5 172 aa12.58□□□□□ -0.4
HOMER3-204ENST00000539827 KRTAP10-8P60410 259 aa12.57□□□□□ -0.4
HOMER3-204ENST00000539827 KRTAP16-1A8MUX0 517 aa12.56□□□□□ -0.4
HOMER3-204ENST00000539827 CYP4F30PQ9H0H9 118 aa12.56□□□□□ -0.4
HOMER3-204ENST00000539827 LRP1Q07954 4544 aaKnown RBP12.55□□□□□ -0.4
HOMER3-204ENST00000539827 C1orf64Q8NEQ6 169 aa12.55□□□□□ -0.4
HOMER3-204ENST00000539827 RETNLBQ9BQ08 111 aa12.53□□□□□ -0.4
HOMER3-204ENST00000539827 C4orf26Q17RF5 130 aa12.52□□□□□ -0.41
HOMER3-204ENST00000539827 Q8N9P0 234 aaPredicted RBP12.51□□□□□ -0.41
HOMER3-204ENST00000539827 SPANXA2-OT1Q8N9U9 137 aa12.51□□□□□ -0.41
HOMER3-204ENST00000539827 Q5W150 140 aa12.5□□□□□ -0.41
HOMER3-204ENST00000539827 FP248Q71RG6 208 aaPredicted RBP12.5□□□□□ -0.41
HOMER3-204ENST00000539827 TNXBP22105 4242 aa12.5□□□□□ -0.41
HOMER3-204ENST00000539827 FAT3Q8TDW7 4589 aa12.49□□□□□ -0.41
HOMER3-204ENST00000539827 FLG2Q5D862 2391 aaPredicted RBP12.44□□□□□ -0.42
HOMER3-204ENST00000539827 KRTAP13-3Q3SY46 172 aa12.43□□□□□ -0.42
HOMER3-204ENST00000539827 C9orf92A6NGG3 77 aa12.41□□□□□ -0.42
HOMER3-204ENST00000539827 HERC2O95714 4834 aa12.4□□□□□ -0.42
HOMER3-204ENST00000539827 PCOTHQ58A44 107 aa12.38□□□□□ -0.43
HOMER3-204ENST00000539827 PRR4Q16378 134 aa12.37□□□□□ -0.43
HOMER3-204ENST00000539827 KRTAP4-5Q9BYR2 181 aa12.36□□□□□ -0.43
HOMER3-204ENST00000539827 MT1HL1P0DM35 61 aa12.36□□□□□ -0.43
HOMER3-204ENST00000539827 LOC101927531A0A1B0GV80 90 aa12.33□□□□□ -0.44
HOMER3-204ENST00000539827 MPLKIPQ8TAP9 179 aa12.3□□□□□ -0.44
HOMER3-204ENST00000539827 IGLV7-46A0A075B6I9 117 aa12.29□□□□□ -0.44
HOMER3-204ENST00000539827 ABCA13Q86UQ4 5058 aa12.28□□□□□ -0.44
HOMER3-204ENST00000539827 Q1T7F1 81 aa12.27□□□□□ -0.45
HOMER3-204ENST00000539827 MYCBP2O75592 4640 aa12.25□□□□□ -0.45
HOMER3-204ENST00000539827 DMBT1Q9UGM3 2413 aaPredicted RBP12.24□□□□□ -0.45
HOMER3-204ENST00000539827 IGKV2-30P06310 120 aa12.23□□□□□ -0.45
HOMER3-204ENST00000539827 A8MUU9 505 aa12.22□□□□□ -0.45
HOMER3-204ENST00000539827 C20orf166-AS1Q96NR2 134 aa12.22□□□□□ -0.45
HOMER3-204ENST00000539827 V9GYY9 64 aa12.22□□□□□ -0.45
HOMER3-204ENST00000539827 PCLOQ9Y6V0 5065 aa12.19□□□□□ -0.46
HOMER3-204ENST00000539827 IGKV2D-30A0A075B6S6 120 aa12.18□□□□□ -0.46
HOMER3-204ENST00000539827 COA5Q86WW8 74 aa12.14□□□□□ -0.47
HOMER3-204ENST00000539827 HRES1P13985 223 aa12.11□□□□□ -0.47
HOMER3-204ENST00000539827 PRO0628Q9UI54 55 aa12.09□□□□□ -0.47
HOMER3-204ENST00000539827 Q75L30 129 aa12.07□□□□□ -0.48
HOMER3-204ENST00000539827 C7orf65Q6ZTY9 151 aa12.03□□□□□ -0.48
HOMER3-204ENST00000539827 BRK1Q8WUW1 75 aa12.01□□□□□ -0.49
HOMER3-204ENST00000539827 XP32Q5T750 250 aa11.99□□□□□ -0.49
HOMER3-204ENST00000539827 PSPHP1O15172 72 aa11.98□□□□□ -0.49
HOMER3-204ENST00000539827 RPL37P61927 97 aaKnown RBP11.94□□□□□ -0.5
HOMER3-204ENST00000539827 A8MUN3 132 aa11.93□□□□□ -0.5
HOMER3-204ENST00000539827 ATP11AUNQ6ZP68 121 aa11.92□□□□□ -0.5
HOMER3-204ENST00000539827 J3QL48 77 aa11.91□□□□□ -0.5
HOMER3-204ENST00000539827 DMAC1Q96GE9 116 aa11.91□□□□□ -0.5
HOMER3-204ENST00000539827 ACYP2P14621 99 aa11.9□□□□□ -0.5
HOMER3-204ENST00000539827 SPINK7P58062 85 aa11.9□□□□□ -0.5
HOMER3-204ENST00000539827 Q5VV11 94 aa11.88□□□□□ -0.51
HOMER3-204ENST00000539827 PRR15LQ9BU68 103 aa11.88□□□□□ -0.51
HOMER3-204ENST00000539827 LINC01558Q9Y6Z2 57 aa11.85□□□□□ -0.51
HOMER3-204ENST00000539827 TPRXLQ17RH7 258 aa11.83□□□□□ -0.52
HOMER3-204ENST00000539827 CHKB-CPT1BH3BT56 60 aa11.78□□□□□ -0.52
HOMER3-204ENST00000539827 HERC1Q15751 4861 aa11.72□□□□□ -0.53
HOMER3-204ENST00000539827 LPAP08519 4548 aa11.69□□□□□ -0.54
HOMER3-204ENST00000539827 KRTAP3-1Q9BYR8 98 aa11.67□□□□□ -0.54
HOMER3-204ENST00000539827 A6NED7 52 aa11.65□□□□□ -0.54
HOMER3-204ENST00000539827 LRP2P98164 4655 aa11.63□□□□□ -0.55
HOMER3-204ENST00000539827 COX6B2Q6YFQ2 88 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms