RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
UBE3B-209ENST00000539584 LCA10Q71F78 164 aa7.84□□□□□ -1.15
UBE3B-209ENST00000539584 SPAG11AQ6PDA7 123 aa7.83□□□□□ -1.16
UBE3B-209ENST00000539584 KRTAP13-3Q3SY46 172 aa7.82□□□□□ -1.16
UBE3B-209ENST00000539584 IGLV7-43P04211 117 aa7.81□□□□□ -1.16
UBE3B-209ENST00000539584 A0A087X002 238 aa7.81□□□□□ -1.16
UBE3B-209ENST00000539584 NOTCH2NLQ7Z3S9 236 aa7.81□□□□□ -1.16
UBE3B-209ENST00000539584 ACYP2P14621 99 aa7.8□□□□□ -1.16
UBE3B-209ENST00000539584 MGAM2Q2M2H8 2515 aa7.8□□□□□ -1.16
UBE3B-209ENST00000539584 A8MU10 97 aa7.79□□□□□ -1.16
UBE3B-209ENST00000539584 KTN1-AS1Q86SY8 53 aa7.79□□□□□ -1.16
UBE3B-209ENST00000539584 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
UBE3B-209ENST00000539584 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
UBE3B-209ENST00000539584 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
UBE3B-209ENST00000539584 SPTSSBQ8NFR3 76 aa7.78□□□□□ -1.16
UBE3B-209ENST00000539584 DNAH7Q8WXX0 4024 aa7.77□□□□□ -1.17
UBE3B-209ENST00000539584 Q5W150 140 aa7.76□□□□□ -1.17
UBE3B-209ENST00000539584 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
UBE3B-209ENST00000539584 SPINK6Q6UWN8 80 aa7.76□□□□□ -1.17
UBE3B-209ENST00000539584 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
UBE3B-209ENST00000539584 CIRBP-AS1Q8TBR5 109 aa7.75□□□□□ -1.17
UBE3B-209ENST00000539584 CSMD3Q7Z407 3707 aa7.74□□□□□ -1.17
UBE3B-209ENST00000539584 A6NN06 94 aa7.74□□□□□ -1.17
UBE3B-209ENST00000539584 C1orf134Q5TEV5 83 aa7.74□□□□□ -1.17
UBE3B-209ENST00000539584 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
UBE3B-209ENST00000539584 LINC00313P59037 77 aa7.73□□□□□ -1.17
UBE3B-209ENST00000539584 VPS13DQ5THJ4 4388 aa7.73□□□□□ -1.17
UBE3B-209ENST00000539584 DNAH8Q96JB1 4490 aa7.69□□□□□ -1.18
UBE3B-209ENST00000539584 SPINK7P58062 85 aa7.68□□□□□ -1.18
UBE3B-209ENST00000539584 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
UBE3B-209ENST00000539584 IGKV2-30P06310 120 aa7.66□□□□□ -1.18
UBE3B-209ENST00000539584 HECTD4Q9Y4D8 3996 aa7.66□□□□□ -1.18
UBE3B-209ENST00000539584 DNAH17Q9UFH2 4485 aa7.66□□□□□ -1.18
UBE3B-209ENST00000539584 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.18
UBE3B-209ENST00000539584 C7orf65Q6ZTY9 151 aa7.65□□□□□ -1.18
UBE3B-209ENST00000539584 LCE2BO14633 110 aa7.64□□□□□ -1.19
UBE3B-209ENST00000539584 PRKDCP78527 4128 aaKnown RBP7.62□□□□□ -1.19
UBE3B-209ENST00000539584 STARD9Q9P2P6 4700 aa7.62□□□□□ -1.19
UBE3B-209ENST00000539584 FRAS1Q86XX4 4008 aa7.61□□□□□ -1.19
UBE3B-209ENST00000539584 J3QL48 77 aa7.6□□□□□ -1.19
UBE3B-209ENST00000539584 A0A1B0GU69 56 aa7.59□□□□□ -1.19
UBE3B-209ENST00000539584 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
UBE3B-209ENST00000539584 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
UBE3B-209ENST00000539584 Q6ZSA8 131 aa7.57□□□□□ -1.2
UBE3B-209ENST00000539584 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
UBE3B-209ENST00000539584 DNAH2Q9P225 4427 aa7.57□□□□□ -1.2
UBE3B-209ENST00000539584 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
UBE3B-209ENST00000539584 LY6G6CO95867 125 aa7.54□□□□□ -1.2
UBE3B-209ENST00000539584 ALMS1Q8TCU4 4167 aa7.54□□□□□ -1.2
UBE3B-209ENST00000539584 KMT2AQ03164 3969 aa7.52□□□□□ -1.21
UBE3B-209ENST00000539584 UQCR11O14957 56 aa7.51□□□□□ -1.21
UBE3B-209ENST00000539584 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
UBE3B-209ENST00000539584 SPINK1P00995 79 aa7.51□□□□□ -1.21
UBE3B-209ENST00000539584 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
UBE3B-209ENST00000539584 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
UBE3B-209ENST00000539584 RETNLBQ9BQ08 111 aa7.49□□□□□ -1.21
UBE3B-209ENST00000539584 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
UBE3B-209ENST00000539584 PLA2G1BP04054 148 aaKnown RBP7.46□□□□□ -1.22
UBE3B-209ENST00000539584 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.22
UBE3B-209ENST00000539584 DNAH11Q96DT5 4516 aa7.46□□□□□ -1.22
UBE3B-209ENST00000539584 KRTAP10-1P60331 282 aa7.44□□□□□ -1.22
UBE3B-209ENST00000539584 DNAH6Q9C0G6 4158 aa7.44□□□□□ -1.22
UBE3B-209ENST00000539584 MEGF8Q7Z7M0 2845 aa7.44□□□□□ -1.22
UBE3B-209ENST00000539584 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
UBE3B-209ENST00000539584 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
UBE3B-209ENST00000539584 DNAH5Q8TE73 4624 aa7.42□□□□□ -1.22
UBE3B-209ENST00000539584 TGP01266 2768 aa7.37□□□□□ -1.23
UBE3B-209ENST00000539584 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.24
UBE3B-209ENST00000539584 LRP1BQ9NZR2 4599 aa7.32□□□□□ -1.24
UBE3B-209ENST00000539584 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
UBE3B-209ENST00000539584 A8MUU9 505 aa7.26□□□□□ -1.25
UBE3B-209ENST00000539584 PRAC1Q96KF2 57 aa7.26□□□□□ -1.25
UBE3B-209ENST00000539584 Q8N1X5 172 aa7.25□□□□□ -1.25
UBE3B-209ENST00000539584 PKD1P98161 4303 aa7.25□□□□□ -1.25
UBE3B-209ENST00000539584 VPS13BQ7Z7G8 4022 aa7.23□□□□□ -1.25
UBE3B-209ENST00000539584 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
UBE3B-209ENST00000539584 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
UBE3B-209ENST00000539584 FAT2Q9NYQ8 4349 aa7.22□□□□□ -1.25
UBE3B-209ENST00000539584 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
UBE3B-209ENST00000539584 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
UBE3B-209ENST00000539584 SACSQ9NZJ4 4579 aa7.15□□□□□ -1.27
UBE3B-209ENST00000539584 A0A1B0GU33 70 aa7.14□□□□□ -1.27
UBE3B-209ENST00000539584 H0YAA0 97 aa7.13□□□□□ -1.27
UBE3B-209ENST00000539584 DNHD1Q96M86 4753 aa7.12□□□□□ -1.27
UBE3B-209ENST00000539584 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
UBE3B-209ENST00000539584 C9orf92A6NGG3 77 aa7.1□□□□□ -1.27
UBE3B-209ENST00000539584 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
UBE3B-209ENST00000539584 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
UBE3B-209ENST00000539584 COX6B2Q6YFQ2 88 aa7.08□□□□□ -1.28
UBE3B-209ENST00000539584 HYDINQ4G0P3 5121 aa7.07□□□□□ -1.28
UBE3B-209ENST00000539584 K7ERS5 55 aa7.04□□□□□ -1.28
UBE3B-209ENST00000539584 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-209ENST00000539584 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
UBE3B-209ENST00000539584 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
UBE3B-209ENST00000539584 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
UBE3B-209ENST00000539584 A0A1B0GVY2 172 aa7□□□□□ -1.29
UBE3B-209ENST00000539584 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
UBE3B-209ENST00000539584 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
UBE3B-209ENST00000539584 APOBP04114 4563 aaKnown RBP6.95□□□□□ -1.3
UBE3B-209ENST00000539584 PKHD1P08F94 4074 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms