RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 FBN2P35556 2912 aa4.04□□□□□ -1.76
SCAPER-203ENST00000538941 UBR5O95071 2799 aaPredicted RBP4.04□□□□□ -1.76
SCAPER-203ENST00000538941 FLNBO75369 2602 aaKnown RBP4.02□□□□□ -1.77
SCAPER-203ENST00000538941 CELSR1Q9NYQ6 3014 aa4.02□□□□□ -1.77
SCAPER-203ENST00000538941 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
SCAPER-203ENST00000538941 TEP1Q99973 2627 aaKnown RBP4.02□□□□□ -1.77
SCAPER-203ENST00000538941 APCP25054 2843 aa4.01□□□□□ -1.77
SCAPER-203ENST00000538941 A0A1B0GU33 70 aa4□□□□□ -1.77
SCAPER-203ENST00000538941 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
SCAPER-203ENST00000538941 NF1P21359 2839 aa3.98□□□□□ -1.77
SCAPER-203ENST00000538941 CRYBG3Q68DQ2 2970 aa3.98□□□□□ -1.77
SCAPER-203ENST00000538941 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
SCAPER-203ENST00000538941 C9orf92A6NGG3 77 aa3.96□□□□□ -1.78
SCAPER-203ENST00000538941 MAST4O15021 2626 aa3.95□□□□□ -1.78
SCAPER-203ENST00000538941 Q6ZRN7 208 aaPredicted RBP3.95□□□□□ -1.78
SCAPER-203ENST00000538941 J3QL48 77 aa3.94□□□□□ -1.78
SCAPER-203ENST00000538941 CELSR2Q9HCU4 2923 aa3.93□□□□□ -1.78
SCAPER-203ENST00000538941 C20orf166-AS1Q96NR2 134 aa3.93□□□□□ -1.78
SCAPER-203ENST00000538941 NIPBLQ6KC79 2804 aaeCLIP3.92□□□□□ -1.78
SCAPER-203ENST00000538941 NOTCH1P46531 2555 aa3.91□□□□□ -1.78
SCAPER-203ENST00000538941 H1FX-AS1Q4G0G2 97 aa3.91□□□□□ -1.78
SCAPER-203ENST00000538941 MGAM2Q2M2H8 2515 aa3.9□□□□□ -1.79
SCAPER-203ENST00000538941 HIVEP1P15822 2718 aa3.9□□□□□ -1.79
SCAPER-203ENST00000538941 ITPR2Q14571 2701 aa3.9□□□□□ -1.79
SCAPER-203ENST00000538941 A0A0D9SG42 100 aa3.89□□□□□ -1.79
SCAPER-203ENST00000538941 A8MUU9 505 aa3.89□□□□□ -1.79
SCAPER-203ENST00000538941 ZFHX3Q15911 3703 aa3.88□□□□□ -1.79
SCAPER-203ENST00000538941 NBEAL1Q6ZS30 2694 aa3.88□□□□□ -1.79
SCAPER-203ENST00000538941 NSD1Q96L73 2696 aaPredicted RBP3.88□□□□□ -1.79
SCAPER-203ENST00000538941 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
SCAPER-203ENST00000538941 STAB1Q9NY15 2570 aa3.86□□□□□ -1.79
SCAPER-203ENST00000538941 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
SCAPER-203ENST00000538941 COL6A5A8TX70 2615 aa3.85□□□□□ -1.79
SCAPER-203ENST00000538941 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.8
SCAPER-203ENST00000538941 KRTAP10-2P60368 255 aa3.83□□□□□ -1.8
SCAPER-203ENST00000538941 VPS13CQ709C8 3753 aa3.82□□□□□ -1.8
SCAPER-203ENST00000538941 CUBNO60494 3623 aa3.82□□□□□ -1.8
SCAPER-203ENST00000538941 SMR3BP02814 79 aaPredicted RBP3.82□□□□□ -1.8
SCAPER-203ENST00000538941 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
SCAPER-203ENST00000538941 TENM3Q9P273 2699 aa3.81□□□□□ -1.8
SCAPER-203ENST00000538941 Q6ZSA8 131 aa3.8□□□□□ -1.8
SCAPER-203ENST00000538941 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
SCAPER-203ENST00000538941 COX6B2Q6YFQ2 88 aa3.8□□□□□ -1.8
SCAPER-203ENST00000538941 CSMD2Q7Z408 3487 aa3.8□□□□□ -1.8
SCAPER-203ENST00000538941 ANK3Q12955 4377 aaKnown RBP3.78□□□□□ -1.8
SCAPER-203ENST00000538941 PDZD2O15018 2839 aa3.78□□□□□ -1.8
SCAPER-203ENST00000538941 H0YAA0 97 aa3.78□□□□□ -1.8
SCAPER-203ENST00000538941 S4R3F8 94 aa3.78□□□□□ -1.8
SCAPER-203ENST00000538941 VWFP04275 2813 aa3.78□□□□□ -1.8
SCAPER-203ENST00000538941 TENM4Q6N022 2769 aa3.76□□□□□ -1.81
SCAPER-203ENST00000538941 TENM1Q9UKZ4 2725 aa3.75□□□□□ -1.81
SCAPER-203ENST00000538941 AKAP9Q99996 3911 aa3.75□□□□□ -1.81
SCAPER-203ENST00000538941 STAB2Q8WWQ8 2551 aa3.74□□□□□ -1.81
SCAPER-203ENST00000538941 KRTAP1-4P0C5Y4 121 aa3.72□□□□□ -1.81
SCAPER-203ENST00000538941 NBPF19A0A087WUL8 3843 aa3.7□□□□□ -1.82
SCAPER-203ENST00000538941 PKD1L1Q8TDX9 2849 aa3.69□□□□□ -1.82
SCAPER-203ENST00000538941 FLG2Q5D862 2391 aaPredicted RBP3.66□□□□□ -1.82
SCAPER-203ENST00000538941 PLAC4Q8WY50 150 aa3.65□□□□□ -1.82
SCAPER-203ENST00000538941 P0C880 135 aa3.65□□□□□ -1.83
SCAPER-203ENST00000538941 OTOGQ6ZRI0 2925 aa3.64□□□□□ -1.83
SCAPER-203ENST00000538941 TRRAPQ9Y4A5 3859 aa3.64□□□□□ -1.83
SCAPER-203ENST00000538941 DMBT1Q9UGM3 2413 aaPredicted RBP3.64□□□□□ -1.83
SCAPER-203ENST00000538941 ZNF469Q96JG9 3925 aaPredicted RBP3.64□□□□□ -1.83
SCAPER-203ENST00000538941 TGP01266 2768 aa3.63□□□□□ -1.83
SCAPER-203ENST00000538941 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
SCAPER-203ENST00000538941 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
SCAPER-203ENST00000538941 R4GN34 69 aa3.6□□□□□ -1.83
SCAPER-203ENST00000538941 M0QZ58 72 aa3.6□□□□□ -1.83
SCAPER-203ENST00000538941 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
SCAPER-203ENST00000538941 TENM2Q9NT68 2774 aa3.55□□□□□ -1.84
SCAPER-203ENST00000538941 HUWE1Q7Z6Z7 4374 aaKnown RBP3.54□□□□□ -1.84
SCAPER-203ENST00000538941 FBN1P35555 2871 aaKnown RBP3.53□□□□□ -1.84
SCAPER-203ENST00000538941 Q5VSD8 79 aa3.53□□□□□ -1.84
SCAPER-203ENST00000538941 TPRXLQ17RH7 258 aa3.51□□□□□ -1.85
SCAPER-203ENST00000538941 XP32Q5T750 250 aa3.49□□□□□ -1.85
SCAPER-203ENST00000538941 KRTAP15-1Q3LI76 137 aa3.48□□□□□ -1.85
SCAPER-203ENST00000538941 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
SCAPER-203ENST00000538941 ALMS1Q8TCU4 4167 aa3.47□□□□□ -1.85
SCAPER-203ENST00000538941 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
SCAPER-203ENST00000538941 M0R2T5 61 aa3.46□□□□□ -1.86
SCAPER-203ENST00000538941 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
SCAPER-203ENST00000538941 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
SCAPER-203ENST00000538941 A0A1B0GVY2 172 aa3.44□□□□□ -1.86
SCAPER-203ENST00000538941 DNAH10Q8IVF4 4471 aa3.44□□□□□ -1.86
SCAPER-203ENST00000538941 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
SCAPER-203ENST00000538941 MEGF8Q7Z7M0 2845 aa3.43□□□□□ -1.86
SCAPER-203ENST00000538941 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
SCAPER-203ENST00000538941 CSMD3Q7Z407 3707 aa3.42□□□□□ -1.86
SCAPER-203ENST00000538941 DNAH1Q9P2D7 4330 aa3.42□□□□□ -1.86
SCAPER-203ENST00000538941 COL7A1Q02388 2944 aa3.39□□□□□ -1.87
SCAPER-203ENST00000538941 KRTAP3-2Q9BYR7 98 aa3.38□□□□□ -1.87
SCAPER-203ENST00000538941 KRTAP3-3Q9BYR6 98 aa3.38□□□□□ -1.87
SCAPER-203ENST00000538941 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
SCAPER-203ENST00000538941 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
SCAPER-203ENST00000538941 DNAH3Q8TD57 4116 aa3.36□□□□□ -1.87
SCAPER-203ENST00000538941 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
SCAPER-203ENST00000538941 PLECQ15149 4684 aaKnown RBP3.34□□□□□ -1.88
SCAPER-203ENST00000538941 DNAH8Q96JB1 4490 aa3.34□□□□□ -1.88
SCAPER-203ENST00000538941 ANK2Q01484 3957 aa3.33□□□□□ -1.88
SCAPER-203ENST00000538941 INE1O15225 51 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms