RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
ATL3-203ENST00000538786 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
ATL3-203ENST00000538786 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
ATL3-203ENST00000538786 SEC61GP60059 68 aa8.56□□□□□ -1.04
ATL3-203ENST00000538786 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
ATL3-203ENST00000538786 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
ATL3-203ENST00000538786 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
ATL3-203ENST00000538786 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
ATL3-203ENST00000538786 FAM236DA0A1B0GTK5 79 aa8.52□□□□□ -1.04
ATL3-203ENST00000538786 FAM236CP0DP71 79 aa8.52□□□□□ -1.04
ATL3-203ENST00000538786 MP68P56378 58 aa8.52□□□□□ -1.04
ATL3-203ENST00000538786 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.04
ATL3-203ENST00000538786 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.04
ATL3-203ENST00000538786 C1orf195Q5TG92 126 aa8.52□□□□□ -1.05
ATL3-203ENST00000538786 DYNC1H1Q14204 4646 aaKnown RBP8.51□□□□□ -1.05
ATL3-203ENST00000538786 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
ATL3-203ENST00000538786 PRR26Q8N8Z3 221 aa8.51□□□□□ -1.05
ATL3-203ENST00000538786 SPINK1P00995 79 aa8.5□□□□□ -1.05
ATL3-203ENST00000538786 TP53AIP1Q9HCN2 124 aa8.5□□□□□ -1.05
ATL3-203ENST00000538786 MRPL34Q9BQ48 92 aaKnown RBP8.5□□□□□ -1.05
ATL3-203ENST00000538786 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
ATL3-203ENST00000538786 H0Y9P7 68 aa8.48□□□□□ -1.05
ATL3-203ENST00000538786 H3BPC8 53 aa8.48□□□□□ -1.05
ATL3-203ENST00000538786 OXTP01178 125 aa8.48□□□□□ -1.05
ATL3-203ENST00000538786 V9GYY9 64 aa8.48□□□□□ -1.05
ATL3-203ENST00000538786 TRAV22A0A0B4J277 110 aa8.46□□□□□ -1.05
ATL3-203ENST00000538786 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.05
ATL3-203ENST00000538786 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.05
ATL3-203ENST00000538786 RPS29P62273 56 aaKnown RBP8.46□□□□□ -1.06
ATL3-203ENST00000538786 LINC00208Q96KT6 92 aa8.46□□□□□ -1.06
ATL3-203ENST00000538786 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
ATL3-203ENST00000538786 NDUFS5O43920 106 aa8.44□□□□□ -1.06
ATL3-203ENST00000538786 APOBP04114 4563 aaKnown RBP8.43□□□□□ -1.06
ATL3-203ENST00000538786 LINC00313P59037 77 aa8.42□□□□□ -1.06
ATL3-203ENST00000538786 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
ATL3-203ENST00000538786 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
ATL3-203ENST00000538786 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
ATL3-203ENST00000538786 Q5VSD8 79 aa8.34□□□□□ -1.07
ATL3-203ENST00000538786 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
ATL3-203ENST00000538786 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
ATL3-203ENST00000538786 EPPK1P58107 5090 aaKnown RBP8.33□□□□□ -1.08
ATL3-203ENST00000538786 FAT1Q14517 4588 aa8.32□□□□□ -1.08
ATL3-203ENST00000538786 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
ATL3-203ENST00000538786 Q5W150 140 aa8.31□□□□□ -1.08
ATL3-203ENST00000538786 SPANXA2-OT1Q8N9U9 137 aa8.31□□□□□ -1.08
ATL3-203ENST00000538786 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
ATL3-203ENST00000538786 CYP4F30PQ9H0H9 118 aa8.29□□□□□ -1.08
ATL3-203ENST00000538786 LOC101927531A0A1B0GV80 90 aa8.27□□□□□ -1.09
ATL3-203ENST00000538786 PRR4Q16378 134 aa8.26□□□□□ -1.09
ATL3-203ENST00000538786 RYR1P21817 5038 aa8.25□□□□□ -1.09
ATL3-203ENST00000538786 PCOTHQ58A44 107 aa8.24□□□□□ -1.09
ATL3-203ENST00000538786 HSPG2P98160 4391 aa8.23□□□□□ -1.09
ATL3-203ENST00000538786 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
ATL3-203ENST00000538786 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
ATL3-203ENST00000538786 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
ATL3-203ENST00000538786 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.1
ATL3-203ENST00000538786 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.1
ATL3-203ENST00000538786 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.1
ATL3-203ENST00000538786 Q8N1X5 172 aa8.2□□□□□ -1.1
ATL3-203ENST00000538786 RETNLBQ9BQ08 111 aa8.19□□□□□ -1.1
ATL3-203ENST00000538786 IGKV2-30P06310 120 aa8.15□□□□□ -1.1
ATL3-203ENST00000538786 PMAIP1Q13794 54 aa8.14□□□□□ -1.11
ATL3-203ENST00000538786 BRK1Q8WUW1 75 aa8.14□□□□□ -1.11
ATL3-203ENST00000538786 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
ATL3-203ENST00000538786 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
ATL3-203ENST00000538786 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
ATL3-203ENST00000538786 A8MUU9 505 aa8.09□□□□□ -1.11
ATL3-203ENST00000538786 HRES1P13985 223 aa8.08□□□□□ -1.12
ATL3-203ENST00000538786 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
ATL3-203ENST00000538786 COA5Q86WW8 74 aa8.06□□□□□ -1.12
ATL3-203ENST00000538786 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
ATL3-203ENST00000538786 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
ATL3-203ENST00000538786 J3QL48 77 aa8.05□□□□□ -1.12
ATL3-203ENST00000538786 TNXBP22105 4242 aa8.03□□□□□ -1.12
ATL3-203ENST00000538786 MPLKIPQ8TAP9 179 aa8.03□□□□□ -1.12
ATL3-203ENST00000538786 LRP1Q07954 4544 aaKnown RBP8.02□□□□□ -1.12
ATL3-203ENST00000538786 C7orf65Q6ZTY9 151 aa8.01□□□□□ -1.13
ATL3-203ENST00000538786 DMAC1Q96GE9 116 aa8.01□□□□□ -1.13
ATL3-203ENST00000538786 Q75L30 129 aa8□□□□□ -1.13
ATL3-203ENST00000538786 Q1T7F1 81 aa7.99□□□□□ -1.13
ATL3-203ENST00000538786 ACYP2P14621 99 aa7.98□□□□□ -1.13
ATL3-203ENST00000538786 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
ATL3-203ENST00000538786 FAT3Q8TDW7 4589 aa7.93□□□□□ -1.14
ATL3-203ENST00000538786 HERC2O95714 4834 aa7.92□□□□□ -1.14
ATL3-203ENST00000538786 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
ATL3-203ENST00000538786 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
ATL3-203ENST00000538786 SPINK7P58062 85 aa7.88□□□□□ -1.15
ATL3-203ENST00000538786 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
ATL3-203ENST00000538786 XP32Q5T750 250 aa7.88□□□□□ -1.15
ATL3-203ENST00000538786 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
ATL3-203ENST00000538786 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
ATL3-203ENST00000538786 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
ATL3-203ENST00000538786 A8MUN3 132 aa7.85□□□□□ -1.15
ATL3-203ENST00000538786 PSPHP1O15172 72 aa7.84□□□□□ -1.15
ATL3-203ENST00000538786 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
ATL3-203ENST00000538786 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
ATL3-203ENST00000538786 RBM12B-AS1Q9P1G2 102 aa7.8□□□□□ -1.16
ATL3-203ENST00000538786 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
ATL3-203ENST00000538786 PRR15LQ9BU68 103 aa7.79□□□□□ -1.16
ATL3-203ENST00000538786 Q5VV11 94 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms