RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 C9JAW5 83 aa4.46□□□□□ -1.7
DDB1-212ENST00000538470 RBM3P98179 157 aaKnown RBP4.45□□□□□ -1.7
DDB1-212ENST00000538470 MTURNQ8N3F0 131 aa4.45□□□□□ -1.7
DDB1-212ENST00000538470 DSCR8Q96T75 97 aa4.45□□□□□ -1.7
DDB1-212ENST00000538470 TRBV7-4A0A0J9YYF1 115 aa4.44□□□□□ -1.7
DDB1-212ENST00000538470 SIGMAR1Q99720 223 aa4.44□□□□□ -1.7
DDB1-212ENST00000538470 COL5A1-AS1Q5SY13 56 aa4.43□□□□□ -1.7
DDB1-212ENST00000538470 SPCS1Q9Y6A9 102 aa4.42□□□□□ -1.7
DDB1-212ENST00000538470 JMJD7-PLA2G4BH0Y9G9 81 aa4.41□□□□□ -1.7
DDB1-212ENST00000538470 DEFB116Q30KQ4 102 aa4.41□□□□□ -1.7
DDB1-212ENST00000538470 C14orf132Q9NPU4 83 aa4.41□□□□□ -1.7
DDB1-212ENST00000538470 IGKV4-1P06312 121 aa4.4□□□□□ -1.71
DDB1-212ENST00000538470 DSCR10P59022 87 aa4.4□□□□□ -1.71
DDB1-212ENST00000538470 LOC110117498A0A087WWA1 95 aa4.39□□□□□ -1.71
DDB1-212ENST00000538470 H3BT86 120 aa4.39□□□□□ -1.71
DDB1-212ENST00000538470 Q6ZQT0 140 aa4.39□□□□□ -1.71
DDB1-212ENST00000538470 LINC00313P59037 77 aa4.38□□□□□ -1.71
DDB1-212ENST00000538470 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
DDB1-212ENST00000538470 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
DDB1-212ENST00000538470 LINC00472Q9H8W2 130 aa4.37□□□□□ -1.71
DDB1-212ENST00000538470 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
DDB1-212ENST00000538470 K7EP34 96 aa4.36□□□□□ -1.71
DDB1-212ENST00000538470 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
DDB1-212ENST00000538470 PDE6GP18545 87 aa4.36□□□□□ -1.71
DDB1-212ENST00000538470 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
DDB1-212ENST00000538470 USH2AO75445 5202 aa4.36□□□□□ -1.71
DDB1-212ENST00000538470 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
DDB1-212ENST00000538470 IGHV6-1A0A0B4J1U7 121 aa4.35□□□□□ -1.71
DDB1-212ENST00000538470 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
DDB1-212ENST00000538470 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
DDB1-212ENST00000538470 HRES1P13985 223 aa4.33□□□□□ -1.72
DDB1-212ENST00000538470 A0A1B0GVX0 72 aa4.32□□□□□ -1.72
DDB1-212ENST00000538470 MT2AP02795 61 aa4.32□□□□□ -1.72
DDB1-212ENST00000538470 GTF2H5Q6ZYL4 71 aa4.32□□□□□ -1.72
DDB1-212ENST00000538470 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
DDB1-212ENST00000538470 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
DDB1-212ENST00000538470 PRO0461Q9UI25 63 aa4.32□□□□□ -1.72
DDB1-212ENST00000538470 A0A1B0GW54 56 aa4.31□□□□□ -1.72
DDB1-212ENST00000538470 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
DDB1-212ENST00000538470 J3KT08 172 aa4.31□□□□□ -1.72
DDB1-212ENST00000538470 NREPQ16612 68 aa4.31□□□□□ -1.72
DDB1-212ENST00000538470 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
DDB1-212ENST00000538470 NDUFB1O75438 58 aa4.29□□□□□ -1.72
DDB1-212ENST00000538470 A8MWP4 228 aa4.28□□□□□ -1.72
DDB1-212ENST00000538470 MT1FP04733 61 aa4.28□□□□□ -1.72
DDB1-212ENST00000538470 IGKV3D-7A0A0C4DH55 119 aa4.27□□□□□ -1.73
DDB1-212ENST00000538470 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
DDB1-212ENST00000538470 F8W1H4 67 aa4.26□□□□□ -1.73
DDB1-212ENST00000538470 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
DDB1-212ENST00000538470 K7EQZ3 153 aa4.25□□□□□ -1.73
DDB1-212ENST00000538470 BPY2O14599 106 aa4.25□□□□□ -1.73
DDB1-212ENST00000538470 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
DDB1-212ENST00000538470 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
DDB1-212ENST00000538470 Q6ZVQ6 151 aa4.25□□□□□ -1.73
DDB1-212ENST00000538470 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
DDB1-212ENST00000538470 C8orf17Q9NRJ1 99 aa4.25□□□□□ -1.73
DDB1-212ENST00000538470 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
DDB1-212ENST00000538470 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
DDB1-212ENST00000538470 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
DDB1-212ENST00000538470 SPINK7P58062 85 aa4.23□□□□□ -1.73
DDB1-212ENST00000538470 Q8N9L7 120 aa4.23□□□□□ -1.73
DDB1-212ENST00000538470 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
DDB1-212ENST00000538470 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
DDB1-212ENST00000538470 MMP24-AS1A0A0U1RRL7 71 aa4.21□□□□□ -1.74
DDB1-212ENST00000538470 A0A1B0GV90 55 aa4.21□□□□□ -1.74
DDB1-212ENST00000538470 WFDC13Q8IUB5 93 aa4.2□□□□□ -1.74
DDB1-212ENST00000538470 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
DDB1-212ENST00000538470 hDV103S1A0JD37 113 aa4.19□□□□□ -1.74
DDB1-212ENST00000538470 NDUFS5O43920 106 aa4.19□□□□□ -1.74
DDB1-212ENST00000538470 TMEM254Q8TBM7 123 aa4.18□□□□□ -1.74
DDB1-212ENST00000538470 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
DDB1-212ENST00000538470 CASC2Q6XLA1 102 aa4.16□□□□□ -1.74
DDB1-212ENST00000538470 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
DDB1-212ENST00000538470 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
DDB1-212ENST00000538470 HCG22E2RYF7 251 aa4.13□□□□□ -1.75
DDB1-212ENST00000538470 ACYP1P07311 99 aa4.12□□□□□ -1.75
DDB1-212ENST00000538470 CXCL6P80162 114 aa4.12□□□□□ -1.75
DDB1-212ENST00000538470 FAM240AA0A1B0GVK7 77 aa4.11□□□□□ -1.75
DDB1-212ENST00000538470 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
DDB1-212ENST00000538470 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
DDB1-212ENST00000538470 IGKV2-30P06310 120 aa4.09□□□□□ -1.75
DDB1-212ENST00000538470 Q5W150 140 aa4.09□□□□□ -1.75
DDB1-212ENST00000538470 C7orf65Q6ZTY9 151 aa4.08□□□□□ -1.76
DDB1-212ENST00000538470 HIST1H4AP62805 103 aaKnown RBP4.07□□□□□ -1.76
DDB1-212ENST00000538470 ATP5EP2Q5VTU8 51 aa4.07□□□□□ -1.76
DDB1-212ENST00000538470 LINC00643Q86TS7 51 aa4.04□□□□□ -1.76
DDB1-212ENST00000538470 A0A087WVE0 104 aa4.03□□□□□ -1.76
DDB1-212ENST00000538470 J3QR89 54 aa4.03□□□□□ -1.76
DDB1-212ENST00000538470 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
DDB1-212ENST00000538470 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
DDB1-212ENST00000538470 C4orf26Q17RF5 130 aa3.99□□□□□ -1.77
DDB1-212ENST00000538470 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
DDB1-212ENST00000538470 FAM236AA0A1B0GUQ0 79 aa3.95□□□□□ -1.78
DDB1-212ENST00000538470 FAM236BA0A1B0GV22 79 aa3.95□□□□□ -1.78
DDB1-212ENST00000538470 H0Y9P7 68 aa3.95□□□□□ -1.78
DDB1-212ENST00000538470 C5orf47Q569G3 176 aa3.95□□□□□ -1.78
DDB1-212ENST00000538470 K7ERU9 68 aa3.94□□□□□ -1.78
DDB1-212ENST00000538470 UQCRQO14949 82 aa3.94□□□□□ -1.78
DDB1-212ENST00000538470 S4R3F8 94 aa3.94□□□□□ -1.78
DDB1-212ENST00000538470 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms