RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
MDM1-208ENST00000538454 ZANQ9Y493 2812 aa0.11□□□□□ -2.39
MDM1-208ENST00000538454 IGLV5-48A0A075B6I7 105 aa0.11□□□□□ -2.39
MDM1-208ENST00000538454 PRRC2CQ9Y520 2896 aaKnown RBP0.11□□□□□ -2.39
MDM1-208ENST00000538454 LINC01546A6NGU7 62 aa0.1□□□□□ -2.39
MDM1-208ENST00000538454 H3BNG1 76 aa0.1□□□□□ -2.39
MDM1-208ENST00000538454 KRTAP6-2Q3LI66 62 aa0.1□□□□□ -2.39
MDM1-208ENST00000538454 ABRACLQ9P1F3 81 aa0.1□□□□□ -2.39
MDM1-208ENST00000538454 KAAG1Q9UBP8 84 aa0.1□□□□□ -2.39
MDM1-208ENST00000538454 FAM208AQ9UK61 1670 aaKnown RBP0.1□□□□□ -2.39
MDM1-208ENST00000538454 HSPG2P98160 4391 aa0.1□□□□□ -2.39
MDM1-208ENST00000538454 SMIM27A0A1W2PRY6 76 aa0.09□□□□□ -2.4
MDM1-208ENST00000538454 TFF3Q07654 80 aa0.09□□□□□ -2.4
MDM1-208ENST00000538454 NOP10Q9NPE3 64 aaKnown RBP0.09□□□□□ -2.4
MDM1-208ENST00000538454 MAP1AP78559 2803 aaPredicted RBP0.09□□□□□ -2.4
MDM1-208ENST00000538454 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
MDM1-208ENST00000538454 SPRR2AP35326 72 aa0.08□□□□□ -2.4
MDM1-208ENST00000538454 WFDC10BQ8IUB3 73 aa0.08□□□□□ -2.4
MDM1-208ENST00000538454 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
MDM1-208ENST00000538454 HECTD1Q9ULT8 2610 aa0.08□□□□□ -2.4
MDM1-208ENST00000538454 CEP290O15078 2479 aa0.07□□□□□ -2.4
MDM1-208ENST00000538454 PKD1L2Q7Z442 2459 aa0.07□□□□□ -2.4
MDM1-208ENST00000538454 NFAT5O94916 1531 aa0.07□□□□□ -2.4
MDM1-208ENST00000538454 IQGAP2Q13576 1575 aa0.06□□□□□ -2.4
MDM1-208ENST00000538454 COL6A3P12111 3177 aa0.06□□□□□ -2.4
MDM1-208ENST00000538454 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
MDM1-208ENST00000538454 CREBBPQ92793 2442 aa0.06□□□□□ -2.4
MDM1-208ENST00000538454 SPTBN4Q9H254 2564 aa0.05□□□□□ -2.4
MDM1-208ENST00000538454 SYNE2Q8WXH0 6885 aaKnown RBP0.05□□□□□ -2.4
MDM1-208ENST00000538454 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
MDM1-208ENST00000538454 SMIM2Q9BVW6 85 aa0.05□□□□□ -2.4
MDM1-208ENST00000538454 VPS13BQ7Z7G8 4022 aa0.05□□□□□ -2.4
MDM1-208ENST00000538454 STAB1Q9NY15 2570 aa0.04□□□□□ -2.4
MDM1-208ENST00000538454 PKD1P98161 4303 aa0.04□□□□□ -2.4
MDM1-208ENST00000538454 MMP24-AS1A0A0U1RRL7 71 aa0.04□□□□□ -2.4
MDM1-208ENST00000538454 SPRR2EP22531 72 aa0.04□□□□□ -2.4
MDM1-208ENST00000538454 SVEP1Q4LDE5 3571 aa0.04□□□□□ -2.4
MDM1-208ENST00000538454 FSIP2Q5CZC0 6907 aa0.03□□□□□ -2.4
MDM1-208ENST00000538454 M0QY20 66 aa0.03□□□□□ -2.4
MDM1-208ENST00000538454 MT1AP04731 61 aa0.03□□□□□ -2.4
MDM1-208ENST00000538454 LRP2P98164 4655 aa0.03□□□□□ -2.4
MDM1-208ENST00000538454 TOMM5Q8N4H5 51 aa0.03□□□□□ -2.4
MDM1-208ENST00000538454 CUBNO60494 3623 aa0.02□□□□□ -2.41
MDM1-208ENST00000538454 DEFB110Q30KQ9 67 aa0.02□□□□□ -2.41
MDM1-208ENST00000538454 PDZD2O15018 2839 aa0.01□□□□□ -2.41
MDM1-208ENST00000538454 NF1P21359 2839 aa0.01□□□□□ -2.41
MDM1-208ENST00000538454 ZZEF1O43149 2961 aa0.01□□□□□ -2.41
MDM1-208ENST00000538454 PKHD1P08F94 4074 aa0.01□□□□□ -2.41
MDM1-208ENST00000538454 CLTCL1P53675 1640 aa0.01□□□□□ -2.41
MDM1-208ENST00000538454 MACF1Q9UPN3 7388 aaKnown RBP0.01□□□□□ -2.41
MDM1-208ENST00000538454 A8MTW9 85 aa0□□□□□ -2.41
MDM1-208ENST00000538454 TRPM2O94759 1503 aa0□□□□□ -2.41
MDM1-208ENST00000538454 TNP1P09430 55 aa0□□□□□ -2.41
MDM1-208ENST00000538454 DEFB131AP59861 70 aa0□□□□□ -2.41
MDM1-208ENST00000538454 STAB2Q8WWQ8 2551 aa0□□□□□ -2.41
MDM1-208ENST00000538454 SETD2Q9BYW2 2564 aaPredicted RBP0□□□□□ -2.41
MDM1-208ENST00000538454 SSPOA2VEC9 5147 aa-0□□□□□ -2.41
MDM1-208ENST00000538454 PKHD1L1Q86WI1 4243 aa-0□□□□□ -2.41
MDM1-208ENST00000538454 FLGP20930 4061 aaPredicted RBP-0□□□□□ -2.41
MDM1-208ENST00000538454 DMXL1Q9Y485 3027 aa-0□□□□□ -2.41
MDM1-208ENST00000538454 NBEAL1Q6ZS30 2694 aa-0□□□□□ -2.41
MDM1-208ENST00000538454 SPRR2FQ96RM1 72 aa-0.01□□□□□ -2.41
MDM1-208ENST00000538454 SPG11Q96JI7 2443 aa-0.01□□□□□ -2.41
MDM1-208ENST00000538454 SACSQ9NZJ4 4579 aa-0.01□□□□□ -2.41
MDM1-208ENST00000538454 MTORP42345 2549 aa-0.02□□□□□ -2.41
MDM1-208ENST00000538454 GCN1Q92616 2671 aaKnown RBP-0.02□□□□□ -2.41
MDM1-208ENST00000538454 M0QZ58 72 aa-0.02□□□□□ -2.41
MDM1-208ENST00000538454 NDUFA1O15239 70 aa-0.02□□□□□ -2.41
MDM1-208ENST00000538454 ANK3Q12955 4377 aaKnown RBP-0.03□□□□□ -2.41
MDM1-208ENST00000538454 A0A0C4DFX4 3053 aa-0.03□□□□□ -2.41
MDM1-208ENST00000538454 DNAH3Q8TD57 4116 aa-0.03□□□□□ -2.41
MDM1-208ENST00000538454 ATP7AQ04656 1500 aa-0.03□□□□□ -2.41
MDM1-208ENST00000538454 TGP01266 2768 aa-0.04□□□□□ -2.42
MDM1-208ENST00000538454 SRRM2Q9UQ35 2752 aaKnown RBP-0.04□□□□□ -2.42
MDM1-208ENST00000538454 TACC2O95359 2948 aa-0.05□□□□□ -2.42
MDM1-208ENST00000538454 FAM186AA6NE01 2351 aa-0.05□□□□□ -2.42
MDM1-208ENST00000538454 ACACAQ13085 2346 aa-0.05□□□□□ -2.42
MDM1-208ENST00000538454 AKAP9Q99996 3911 aa-0.06□□□□□ -2.42
MDM1-208ENST00000538454 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
MDM1-208ENST00000538454 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.06□□□□□ -2.42
MDM1-208ENST00000538454 ACACBO00763 2458 aa-0.06□□□□□ -2.42
MDM1-208ENST00000538454 DNAH9Q9NYC9 4486 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 COL6A5A8TX70 2615 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 FAT3Q8TDW7 4589 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 KRTAP19-5Q3LI72 72 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 KRTAP19-7Q3SYF9 63 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 MXRA5Q9NR99 2828 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 SAMD9LQ8IVG5 1584 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 HIVEP1P15822 2718 aa-0.07□□□□□ -2.42
MDM1-208ENST00000538454 LRRK2Q5S007 2527 aa-0.08□□□□□ -2.42
MDM1-208ENST00000538454 POLR2KP53803 58 aaKnown RBP-0.08□□□□□ -2.42
MDM1-208ENST00000538454 CLPSL2Q6UWE3 100 aa-0.08□□□□□ -2.42
MDM1-208ENST00000538454 KRTAP8-1Q8IUC2 63 aa-0.08□□□□□ -2.42
MDM1-208ENST00000538454 HTTP42858 3142 aa-0.08□□□□□ -2.42
MDM1-208ENST00000538454 NBEAL2Q6ZNJ1 2754 aa-0.08□□□□□ -2.42
MDM1-208ENST00000538454 DNAH2Q9P225 4427 aa-0.08□□□□□ -2.42
MDM1-208ENST00000538454 TOP2AP11388 1531 aaKnown RBP-0.08□□□□□ -2.42
MDM1-208ENST00000538454 ANKRD11Q6UB99 2663 aaPredicted RBP-0.09□□□□□ -2.42
MDM1-208ENST00000538454 FASNP49327 2511 aaKnown RBP-0.09□□□□□ -2.42
MDM1-208ENST00000538454 APOBP04114 4563 aaKnown RBP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms