RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 LOC110117498A0A087WWA1 95 aa9.06□□□□□ -0.96
GPN3-202ENST00000537466 A0A1W2PPM0 123 aa9.06□□□□□ -0.96
GPN3-202ENST00000537466 KRTAP16-1A8MUX0 517 aa9.05□□□□□ -0.96
GPN3-202ENST00000537466 C14orf132Q9NPU4 83 aa9.05□□□□□ -0.96
GPN3-202ENST00000537466 IGHV6-1A0A0B4J1U7 121 aa9.03□□□□□ -0.96
GPN3-202ENST00000537466 MTURNQ8N3F0 131 aa9.02□□□□□ -0.96
GPN3-202ENST00000537466 MT1HP80294 61 aa9.02□□□□□ -0.97
GPN3-202ENST00000537466 C21orf62-AS1Q17RA5 79 aa9.02□□□□□ -0.97
GPN3-202ENST00000537466 A0A1B0GVX0 72 aa9□□□□□ -0.97
GPN3-202ENST00000537466 PDE6GP18545 87 aa9□□□□□ -0.97
GPN3-202ENST00000537466 H3BT86 120 aa8.99□□□□□ -0.97
GPN3-202ENST00000537466 A0A1B0GW54 56 aa8.97□□□□□ -0.97
GPN3-202ENST00000537466 J3KT08 172 aa8.97□□□□□ -0.97
GPN3-202ENST00000537466 A0A1B0GV90 55 aa8.95□□□□□ -0.98
GPN3-202ENST00000537466 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
GPN3-202ENST00000537466 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
GPN3-202ENST00000537466 SPCS1Q9Y6A9 102 aa8.95□□□□□ -0.98
GPN3-202ENST00000537466 KRTAP9-2Q9BYQ4 174 aa8.93□□□□□ -0.98
GPN3-202ENST00000537466 FLGP20930 4061 aaPredicted RBP8.91□□□□□ -0.98
GPN3-202ENST00000537466 A8MWP4 228 aa8.89□□□□□ -0.99
GPN3-202ENST00000537466 NDUFB1O75438 58 aa8.89□□□□□ -0.99
GPN3-202ENST00000537466 NREPQ16612 68 aa8.89□□□□□ -0.99
GPN3-202ENST00000537466 IGKV3D-7A0A0C4DH55 119 aa8.88□□□□□ -0.99
GPN3-202ENST00000537466 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
GPN3-202ENST00000537466 GTF2H5Q6ZYL4 71 aa8.87□□□□□ -0.99
GPN3-202ENST00000537466 C8orf17Q9NRJ1 99 aa8.85□□□□□ -0.99
GPN3-202ENST00000537466 K7EP34 96 aa8.83□□□□□ -1
GPN3-202ENST00000537466 M0R2T5 61 aa8.83□□□□□ -1
GPN3-202ENST00000537466 PRO0461Q9UI25 63 aa8.83□□□□□ -1
GPN3-202ENST00000537466 PRR15Q8IV56 129 aa8.82□□□□□ -1
GPN3-202ENST00000537466 KRTAP10-6P60371 365 aaPredicted RBP8.81□□□□□ -1
GPN3-202ENST00000537466 Q8N9P0 234 aaPredicted RBP8.81□□□□□ -1
GPN3-202ENST00000537466 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
GPN3-202ENST00000537466 ZCCHC13Q8WW36 166 aaKnown RBP8.79□□□□□ -1
GPN3-202ENST00000537466 Q6ZVQ6 151 aa8.77□□□□□ -1
GPN3-202ENST00000537466 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
GPN3-202ENST00000537466 K7EQZ3 153 aa8.77□□□□□ -1.01
GPN3-202ENST00000537466 HRES1P13985 223 aa8.77□□□□□ -1.01
GPN3-202ENST00000537466 BPY2O14599 106 aa8.74□□□□□ -1.01
GPN3-202ENST00000537466 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
GPN3-202ENST00000537466 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.01
GPN3-202ENST00000537466 MRPL34Q9BQ48 92 aaKnown RBP8.7□□□□□ -1.02
GPN3-202ENST00000537466 FAM236DA0A1B0GTK5 79 aa8.69□□□□□ -1.02
GPN3-202ENST00000537466 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
GPN3-202ENST00000537466 FAM236CP0DP71 79 aa8.69□□□□□ -1.02
GPN3-202ENST00000537466 SPINK7P58062 85 aa8.69□□□□□ -1.02
GPN3-202ENST00000537466 RBM12B-AS1Q9P1G2 102 aa8.69□□□□□ -1.02
GPN3-202ENST00000537466 Q8N9L7 120 aa8.68□□□□□ -1.02
GPN3-202ENST00000537466 LINC00846Q9NV44 126 aa8.68□□□□□ -1.02
GPN3-202ENST00000537466 F8W1H4 67 aa8.67□□□□□ -1.02
GPN3-202ENST00000537466 LCE2BO14633 110 aa8.63□□□□□ -1.03
GPN3-202ENST00000537466 NDUFS5O43920 106 aa8.63□□□□□ -1.03
GPN3-202ENST00000537466 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
GPN3-202ENST00000537466 ETDBQ3ZM63 59 aa8.62□□□□□ -1.03
GPN3-202ENST00000537466 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
GPN3-202ENST00000537466 CASC2Q6XLA1 102 aa8.58□□□□□ -1.04
GPN3-202ENST00000537466 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
GPN3-202ENST00000537466 Q5W150 140 aa8.55□□□□□ -1.04
GPN3-202ENST00000537466 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
GPN3-202ENST00000537466 FSIP2Q5CZC0 6907 aa8.54□□□□□ -1.04
GPN3-202ENST00000537466 J3QR89 54 aa8.54□□□□□ -1.04
GPN3-202ENST00000537466 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
GPN3-202ENST00000537466 K7ERU9 68 aa8.51□□□□□ -1.05
GPN3-202ENST00000537466 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
GPN3-202ENST00000537466 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
GPN3-202ENST00000537466 CXCL6P80162 114 aa8.46□□□□□ -1.05
GPN3-202ENST00000537466 CRCT1Q9UGL9 99 aa8.45□□□□□ -1.06
GPN3-202ENST00000537466 MT2AP02795 61 aa8.45□□□□□ -1.06
GPN3-202ENST00000537466 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
GPN3-202ENST00000537466 MT1FP04733 61 aa8.39□□□□□ -1.07
GPN3-202ENST00000537466 ACYP1P07311 99 aa8.38□□□□□ -1.07
GPN3-202ENST00000537466 FAM240AA0A1B0GVK7 77 aa8.36□□□□□ -1.07
GPN3-202ENST00000537466 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
GPN3-202ENST00000537466 KRTAP10-10P60014 251 aa8.32□□□□□ -1.08
GPN3-202ENST00000537466 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
GPN3-202ENST00000537466 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
GPN3-202ENST00000537466 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
GPN3-202ENST00000537466 KRTAP9-3Q9BYQ3 159 aa8.27□□□□□ -1.09
GPN3-202ENST00000537466 USH2AO75445 5202 aa8.27□□□□□ -1.09
GPN3-202ENST00000537466 HIST1H4AP62805 103 aaKnown RBP8.25□□□□□ -1.09
GPN3-202ENST00000537466 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
GPN3-202ENST00000537466 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
GPN3-202ENST00000537466 A0A087WVE0 104 aa8.18□□□□□ -1.1
GPN3-202ENST00000537466 TRAV22A0A0B4J277 110 aa8.18□□□□□ -1.1
GPN3-202ENST00000537466 C1orf64Q8NEQ6 169 aa8.18□□□□□ -1.1
GPN3-202ENST00000537466 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
GPN3-202ENST00000537466 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
GPN3-202ENST00000537466 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
GPN3-202ENST00000537466 LOC101927531A0A1B0GV80 90 aa8.11□□□□□ -1.11
GPN3-202ENST00000537466 UQCRQO14949 82 aa8.11□□□□□ -1.11
GPN3-202ENST00000537466 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
GPN3-202ENST00000537466 S4R3F8 94 aa8.11□□□□□ -1.11
GPN3-202ENST00000537466 H0Y9P7 68 aa8.07□□□□□ -1.12
GPN3-202ENST00000537466 LCA10Q71F78 164 aa8.07□□□□□ -1.12
GPN3-202ENST00000537466 MT-ATP8P03928 68 aa8.05□□□□□ -1.12
GPN3-202ENST00000537466 SCGB1A1P11684 91 aa8.05□□□□□ -1.12
GPN3-202ENST00000537466 IMUPQ9GZP8 106 aa8.04□□□□□ -1.12
GPN3-202ENST00000537466 ATOX1O00244 68 aa8.03□□□□□ -1.12
GPN3-202ENST00000537466 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.01□□□□□ -1.13
GPN3-202ENST00000537466 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms