RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 LINC00208Q96KT6 92 aa5.42□□□□□ -1.54
UBE3B-207ENST00000537063 IGHV6-1A0A0B4J1U7 121 aa5.42□□□□□ -1.54
UBE3B-207ENST00000537063 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
UBE3B-207ENST00000537063 CDK2AP2O75956 126 aa5.41□□□□□ -1.54
UBE3B-207ENST00000537063 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
UBE3B-207ENST00000537063 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.54
UBE3B-207ENST00000537063 MRPL34Q9BQ48 92 aaKnown RBP5.4□□□□□ -1.54
UBE3B-207ENST00000537063 PKHD1P08F94 4074 aa5.4□□□□□ -1.55
UBE3B-207ENST00000537063 C1orf64Q8NEQ6 169 aa5.39□□□□□ -1.55
UBE3B-207ENST00000537063 LINC00336Q6ZUF6 198 aa5.38□□□□□ -1.55
UBE3B-207ENST00000537063 C4orf26Q17RF5 130 aa5.37□□□□□ -1.55
UBE3B-207ENST00000537063 DYNC1H1Q14204 4646 aaKnown RBP5.37□□□□□ -1.55
UBE3B-207ENST00000537063 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
UBE3B-207ENST00000537063 A0A1B0GVY2 172 aa5.37□□□□□ -1.55
UBE3B-207ENST00000537063 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
UBE3B-207ENST00000537063 KRTAP13-3Q3SY46 172 aa5.36□□□□□ -1.55
UBE3B-207ENST00000537063 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
UBE3B-207ENST00000537063 SPINK6Q6UWN8 80 aa5.35□□□□□ -1.55
UBE3B-207ENST00000537063 RYR2Q92736 4967 aa5.34□□□□□ -1.56
UBE3B-207ENST00000537063 APOBP04114 4563 aaKnown RBP5.34□□□□□ -1.56
UBE3B-207ENST00000537063 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
UBE3B-207ENST00000537063 LIMD2Q9BT23 127 aa5.33□□□□□ -1.56
UBE3B-207ENST00000537063 NDUFS5O43920 106 aa5.32□□□□□ -1.56
UBE3B-207ENST00000537063 PKHD1L1Q86WI1 4243 aa5.31□□□□□ -1.56
UBE3B-207ENST00000537063 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
UBE3B-207ENST00000537063 PRR4Q16378 134 aa5.31□□□□□ -1.56
UBE3B-207ENST00000537063 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
UBE3B-207ENST00000537063 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
UBE3B-207ENST00000537063 KRTAP10-4P60372 401 aaPredicted RBP5.3□□□□□ -1.56
UBE3B-207ENST00000537063 Q5W150 140 aa5.3□□□□□ -1.56
UBE3B-207ENST00000537063 RPS29P62273 56 aaKnown RBP5.3□□□□□ -1.56
UBE3B-207ENST00000537063 LINC00313P59037 77 aa5.29□□□□□ -1.56
UBE3B-207ENST00000537063 LOC101927531A0A1B0GV80 90 aa5.29□□□□□ -1.56
UBE3B-207ENST00000537063 SPINK1P00995 79 aa5.29□□□□□ -1.56
UBE3B-207ENST00000537063 Q1T7F1 81 aa5.29□□□□□ -1.56
UBE3B-207ENST00000537063 TYMSOSQ8TAI1 123 aa5.29□□□□□ -1.56
UBE3B-207ENST00000537063 PCOTHQ58A44 107 aa5.26□□□□□ -1.57
UBE3B-207ENST00000537063 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
UBE3B-207ENST00000537063 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
UBE3B-207ENST00000537063 C4orf48Q5BLP8 95 aa5.24□□□□□ -1.57
UBE3B-207ENST00000537063 PRR26Q8N8Z3 221 aa5.24□□□□□ -1.57
UBE3B-207ENST00000537063 SPAG11AQ6PDA7 123 aa5.24□□□□□ -1.57
UBE3B-207ENST00000537063 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
UBE3B-207ENST00000537063 COA5Q86WW8 74 aa5.23□□□□□ -1.57
UBE3B-207ENST00000537063 FAT1Q14517 4588 aa5.22□□□□□ -1.57
UBE3B-207ENST00000537063 KMT2CQ8NEZ4 4911 aaKnown RBP5.22□□□□□ -1.57
UBE3B-207ENST00000537063 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
UBE3B-207ENST00000537063 IGKV2-30P06310 120 aa5.2□□□□□ -1.58
UBE3B-207ENST00000537063 V9GYY9 64 aa5.2□□□□□ -1.58
UBE3B-207ENST00000537063 HRES1P13985 223 aa5.19□□□□□ -1.58
UBE3B-207ENST00000537063 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
UBE3B-207ENST00000537063 PRO0628Q9UI54 55 aa5.15□□□□□ -1.58
UBE3B-207ENST00000537063 Q5VV11 94 aa5.13□□□□□ -1.59
UBE3B-207ENST00000537063 RETNLBQ9BQ08 111 aa5.13□□□□□ -1.59
UBE3B-207ENST00000537063 HSPG2P98160 4391 aa5.13□□□□□ -1.59
UBE3B-207ENST00000537063 A8MUN3 132 aa5.12□□□□□ -1.59
UBE3B-207ENST00000537063 PSPHP1O15172 72 aa5.12□□□□□ -1.59
UBE3B-207ENST00000537063 TNXBP22105 4242 aa5.12□□□□□ -1.59
UBE3B-207ENST00000537063 ACYP2P14621 99 aa5.11□□□□□ -1.59
UBE3B-207ENST00000537063 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
UBE3B-207ENST00000537063 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
UBE3B-207ENST00000537063 A8MUU9 505 aa5.1□□□□□ -1.59
UBE3B-207ENST00000537063 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
UBE3B-207ENST00000537063 RYR3Q15413 4870 aa5.1□□□□□ -1.59
UBE3B-207ENST00000537063 Q75L30 129 aa5.09□□□□□ -1.59
UBE3B-207ENST00000537063 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
UBE3B-207ENST00000537063 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
UBE3B-207ENST00000537063 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
UBE3B-207ENST00000537063 RYR1P21817 5038 aa5.07□□□□□ -1.6
UBE3B-207ENST00000537063 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
UBE3B-207ENST00000537063 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
UBE3B-207ENST00000537063 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
UBE3B-207ENST00000537063 Q5VSD8 79 aa5.04□□□□□ -1.6
UBE3B-207ENST00000537063 Q8N1X5 172 aa5.04□□□□□ -1.6
UBE3B-207ENST00000537063 C9orf92A6NGG3 77 aa5.03□□□□□ -1.6
UBE3B-207ENST00000537063 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
UBE3B-207ENST00000537063 CHKB-CPT1BH3BT56 60 aa5.02□□□□□ -1.61
UBE3B-207ENST00000537063 KRTAP17-1Q9BYP8 105 aa5.02□□□□□ -1.61
UBE3B-207ENST00000537063 A8MU10 97 aa4.97□□□□□ -1.61
UBE3B-207ENST00000537063 LCA10Q71F78 164 aa4.97□□□□□ -1.61
UBE3B-207ENST00000537063 A6NED7 52 aa4.95□□□□□ -1.62
UBE3B-207ENST00000537063 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
UBE3B-207ENST00000537063 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
UBE3B-207ENST00000537063 SPINK7P58062 85 aa4.94□□□□□ -1.62
UBE3B-207ENST00000537063 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
UBE3B-207ENST00000537063 KIAA1109Q2LD37 5005 aa4.92□□□□□ -1.62
UBE3B-207ENST00000537063 A0A1B0GU69 56 aa4.91□□□□□ -1.62
UBE3B-207ENST00000537063 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.62
UBE3B-207ENST00000537063 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
UBE3B-207ENST00000537063 XP32Q5T750 250 aa4.89□□□□□ -1.63
UBE3B-207ENST00000537063 EPPK1P58107 5090 aaKnown RBP4.89□□□□□ -1.63
UBE3B-207ENST00000537063 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
UBE3B-207ENST00000537063 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
UBE3B-207ENST00000537063 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
UBE3B-207ENST00000537063 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
UBE3B-207ENST00000537063 A6NN06 94 aa4.83□□□□□ -1.64
UBE3B-207ENST00000537063 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
UBE3B-207ENST00000537063 UQCR11O14957 56 aa4.81□□□□□ -1.64
UBE3B-207ENST00000537063 TPRXLQ17RH7 258 aa4.79□□□□□ -1.64
UBE3B-207ENST00000537063 DMBT1Q9UGM3 2413 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms