RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.86
VPS33A-203ENST00000536212 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
VPS33A-203ENST00000536212 LOC101927531A0A1B0GV80 90 aa3.46□□□□□ -1.86
VPS33A-203ENST00000536212 PANO1I0J062 215 aa3.46□□□□□ -1.86
VPS33A-203ENST00000536212 Q5VV11 94 aa3.46□□□□□ -1.86
VPS33A-203ENST00000536212 SPACA4Q8TDM5 124 aa3.46□□□□□ -1.86
VPS33A-203ENST00000536212 Q96NJ1 140 aa3.46□□□□□ -1.86
VPS33A-203ENST00000536212 GCN1Q92616 2671 aaKnown RBP3.45□□□□□ -1.86
VPS33A-203ENST00000536212 ITPR2Q14571 2701 aa3.44□□□□□ -1.86
VPS33A-203ENST00000536212 NIPBLQ6KC79 2804 aaeCLIP3.44□□□□□ -1.86
VPS33A-203ENST00000536212 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
VPS33A-203ENST00000536212 A6NED7 52 aa3.44□□□□□ -1.86
VPS33A-203ENST00000536212 NUPR2A6NF83 97 aa3.44□□□□□ -1.86
VPS33A-203ENST00000536212 MOBPQ13875 183 aa3.44□□□□□ -1.86
VPS33A-203ENST00000536212 TP53AIP1Q9HCN2 124 aa3.44□□□□□ -1.86
VPS33A-203ENST00000536212 NSD1Q96L73 2696 aaPredicted RBP3.43□□□□□ -1.86
VPS33A-203ENST00000536212 VWFP04275 2813 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 PRR4Q16378 134 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 Q6ZR54 194 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 C8orf17Q9NRJ1 99 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 ZNF706Q9Y5V0 76 aaPredicted RBP3.43□□□□□ -1.86
VPS33A-203ENST00000536212 HIVEP1P15822 2718 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 OTOGQ6ZRI0 2925 aa3.43□□□□□ -1.86
VPS33A-203ENST00000536212 DNAH3Q8TD57 4116 aa3.42□□□□□ -1.86
VPS33A-203ENST00000536212 A0A087WTM6 91 aa3.42□□□□□ -1.86
VPS33A-203ENST00000536212 RETNLBQ9BQ08 111 aa3.41□□□□□ -1.86
VPS33A-203ENST00000536212 PLAC8Q9NZF1 115 aa3.41□□□□□ -1.86
VPS33A-203ENST00000536212 TEP1Q99973 2627 aaKnown RBP3.41□□□□□ -1.86
VPS33A-203ENST00000536212 A0A1B0GVX0 72 aa3.4□□□□□ -1.87
VPS33A-203ENST00000536212 ZNF861PO60384 105 aa3.4□□□□□ -1.87
VPS33A-203ENST00000536212 HUWE1Q7Z6Z7 4374 aaKnown RBP3.4□□□□□ -1.87
VPS33A-203ENST00000536212 HELZ2Q9BYK8 2649 aaKnown RBP3.4□□□□□ -1.87
VPS33A-203ENST00000536212 RTL8CO15255 209 aa3.39□□□□□ -1.87
VPS33A-203ENST00000536212 COA5Q86WW8 74 aa3.39□□□□□ -1.87
VPS33A-203ENST00000536212 MRPL34Q9BQ48 92 aaKnown RBP3.39□□□□□ -1.87
VPS33A-203ENST00000536212 PSORS1C2Q9UIG4 136 aa3.39□□□□□ -1.87
VPS33A-203ENST00000536212 ATRQ13535 2644 aa3.39□□□□□ -1.87
VPS33A-203ENST00000536212 TENM1Q9UKZ4 2725 aa3.38□□□□□ -1.87
VPS33A-203ENST00000536212 TRRAPQ9Y4A5 3859 aa3.38□□□□□ -1.87
VPS33A-203ENST00000536212 PRR15LQ9BU68 103 aa3.38□□□□□ -1.87
VPS33A-203ENST00000536212 TENM3Q9P273 2699 aa3.38□□□□□ -1.87
VPS33A-203ENST00000536212 F8P00451 2351 aa3.37□□□□□ -1.87
VPS33A-203ENST00000536212 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
VPS33A-203ENST00000536212 ANK2Q01484 3957 aa3.36□□□□□ -1.87
VPS33A-203ENST00000536212 CMYA5Q8N3K9 4069 aa3.35□□□□□ -1.87
VPS33A-203ENST00000536212 IGLV7-43P04211 117 aa3.35□□□□□ -1.87
VPS33A-203ENST00000536212 PCOTHQ58A44 107 aa3.35□□□□□ -1.87
VPS33A-203ENST00000536212 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
VPS33A-203ENST00000536212 SSBP3-AS1Q7Z2R9 100 aa3.35□□□□□ -1.87
VPS33A-203ENST00000536212 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
VPS33A-203ENST00000536212 HECTD1Q9ULT8 2610 aa3.35□□□□□ -1.87
VPS33A-203ENST00000536212 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.87
VPS33A-203ENST00000536212 HRES1P13985 223 aa3.33□□□□□ -1.88
VPS33A-203ENST00000536212 FBN1P35555 2871 aaKnown RBP3.33□□□□□ -1.88
VPS33A-203ENST00000536212 C1orf134Q5TEV5 83 aa3.32□□□□□ -1.88
VPS33A-203ENST00000536212 Q5W150 140 aa3.32□□□□□ -1.88
VPS33A-203ENST00000536212 DYNC2H1Q8NCM8 4307 aaKnown RBP3.3□□□□□ -1.88
VPS33A-203ENST00000536212 A8MU10 97 aa3.3□□□□□ -1.88
VPS33A-203ENST00000536212 PKD1L1Q8TDX9 2849 aa3.29□□□□□ -1.88
VPS33A-203ENST00000536212 CIRBP-AS1Q8TBR5 109 aa3.29□□□□□ -1.88
VPS33A-203ENST00000536212 ACYP2P14621 99 aa3.28□□□□□ -1.88
VPS33A-203ENST00000536212 SPAG11AQ6PDA7 123 aa3.28□□□□□ -1.88
VPS33A-203ENST00000536212 SPINK6Q6UWN8 80 aa3.28□□□□□ -1.88
VPS33A-203ENST00000536212 Q6ZSA8 131 aa3.28□□□□□ -1.88
VPS33A-203ENST00000536212 DMAC1Q96GE9 116 aa3.28□□□□□ -1.88
VPS33A-203ENST00000536212 MAST4O15021 2626 aa3.28□□□□□ -1.88
VPS33A-203ENST00000536212 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
VPS33A-203ENST00000536212 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
VPS33A-203ENST00000536212 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
VPS33A-203ENST00000536212 ROMO1P60602 79 aa3.27□□□□□ -1.89
VPS33A-203ENST00000536212 KRTAP13-2Q52LG2 175 aa3.27□□□□□ -1.89
VPS33A-203ENST00000536212 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
VPS33A-203ENST00000536212 FLNBO75369 2602 aaKnown RBP3.27□□□□□ -1.89
VPS33A-203ENST00000536212 BAHCC1Q9P281 2608 aa3.24□□□□□ -1.89
VPS33A-203ENST00000536212 DNAH10Q8IVF4 4471 aa3.24□□□□□ -1.89
VPS33A-203ENST00000536212 K7ERS5 55 aa3.24□□□□□ -1.89
VPS33A-203ENST00000536212 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
VPS33A-203ENST00000536212 SPINK7P58062 85 aa3.24□□□□□ -1.89
VPS33A-203ENST00000536212 STAB1Q9NY15 2570 aa3.24□□□□□ -1.89
VPS33A-203ENST00000536212 LY6G6CO95867 125 aa3.23□□□□□ -1.89
VPS33A-203ENST00000536212 KRTAP10-1P60331 282 aa3.23□□□□□ -1.89
VPS33A-203ENST00000536212 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
VPS33A-203ENST00000536212 VPS13DQ5THJ4 4388 aa3.22□□□□□ -1.89
VPS33A-203ENST00000536212 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
VPS33A-203ENST00000536212 DNAH17Q9UFH2 4485 aa3.21□□□□□ -1.9
VPS33A-203ENST00000536212 SPATA8Q6RVD6 105 aa3.2□□□□□ -1.9
VPS33A-203ENST00000536212 UQCR11O14957 56 aa3.19□□□□□ -1.9
VPS33A-203ENST00000536212 SPINK1P00995 79 aa3.19□□□□□ -1.9
VPS33A-203ENST00000536212 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
VPS33A-203ENST00000536212 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
VPS33A-203ENST00000536212 NOTCH1P46531 2555 aa3.19□□□□□ -1.9
VPS33A-203ENST00000536212 PLECQ15149 4684 aaKnown RBP3.17□□□□□ -1.9
VPS33A-203ENST00000536212 A0A1B0GU69 56 aa3.17□□□□□ -1.9
VPS33A-203ENST00000536212 TYMSOSQ8TAI1 123 aa3.17□□□□□ -1.9
VPS33A-203ENST00000536212 DNAH8Q96JB1 4490 aa3.17□□□□□ -1.9
VPS33A-203ENST00000536212 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
VPS33A-203ENST00000536212 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
VPS33A-203ENST00000536212 STAB2Q8WWQ8 2551 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms