RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 C8orf87E5RJ46 101 aa11.63□□□□□ -0.55
SSPN-204ENST00000535504 C20orf166-AS1Q96NR2 134 aa11.63□□□□□ -0.55
SSPN-204ENST00000535504 A0A1B0GVX0 72 aa11.61□□□□□ -0.55
SSPN-204ENST00000535504 NREPQ16612 68 aa11.61□□□□□ -0.55
SSPN-204ENST00000535504 A8MUU9 505 aa11.6□□□□□ -0.55
SSPN-204ENST00000535504 GTF2H5Q6ZYL4 71 aa11.56□□□□□ -0.56
SSPN-204ENST00000535504 K7EP34 96 aa11.55□□□□□ -0.56
SSPN-204ENST00000535504 FAT4Q6V0I7 4981 aa11.53□□□□□ -0.56
SSPN-204ENST00000535504 A8MWP4 228 aa11.52□□□□□ -0.57
SSPN-204ENST00000535504 COX6B2Q6YFQ2 88 aa11.51□□□□□ -0.57
SSPN-204ENST00000535504 NOTCH2NLQ7Z3S9 236 aa11.49□□□□□ -0.57
SSPN-204ENST00000535504 KRTAP16-1A8MUX0 517 aa11.48□□□□□ -0.57
SSPN-204ENST00000535504 LCE2AQ5TA79 106 aaPredicted RBP11.48□□□□□ -0.57
SSPN-204ENST00000535504 SMCPP49901 116 aaPredicted RBP11.43□□□□□ -0.58
SSPN-204ENST00000535504 C8orf17Q9NRJ1 99 aa11.42□□□□□ -0.58
SSPN-204ENST00000535504 BPY2O14599 106 aa11.41□□□□□ -0.58
SSPN-204ENST00000535504 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.58
SSPN-204ENST00000535504 PRR15Q8IV56 129 aa11.4□□□□□ -0.58
SSPN-204ENST00000535504 PRO0461Q9UI25 63 aa11.4□□□□□ -0.58
SSPN-204ENST00000535504 F8W1H4 67 aa11.39□□□□□ -0.59
SSPN-204ENST00000535504 UBL5Q9BZL1 73 aa11.36□□□□□ -0.59
SSPN-204ENST00000535504 Q6ZVQ6 151 aa11.35□□□□□ -0.59
SSPN-204ENST00000535504 KRTAP19-2Q3LHN2 52 aa11.31□□□□□ -0.6
SSPN-204ENST00000535504 LCE2CQ5TA81 110 aa11.31□□□□□ -0.6
SSPN-204ENST00000535504 Q8N9P0 234 aaPredicted RBP11.31□□□□□ -0.6
SSPN-204ENST00000535504 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
SSPN-204ENST00000535504 K7EQZ3 153 aa11.3□□□□□ -0.6
SSPN-204ENST00000535504 M0R2T5 61 aa11.29□□□□□ -0.6
SSPN-204ENST00000535504 TMEM254Q8TBM7 123 aa11.29□□□□□ -0.6
SSPN-204ENST00000535504 hDV103S1A0JD37 113 aa11.27□□□□□ -0.61
SSPN-204ENST00000535504 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.61
SSPN-204ENST00000535504 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
SSPN-204ENST00000535504 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
SSPN-204ENST00000535504 MMP24-AS1A0A0U1RRL7 71 aa11.25□□□□□ -0.61
SSPN-204ENST00000535504 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
SSPN-204ENST00000535504 NDUFS5O43920 106 aa11.25□□□□□ -0.61
SSPN-204ENST00000535504 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
SSPN-204ENST00000535504 MT1HP80294 61 aa11.25□□□□□ -0.61
SSPN-204ENST00000535504 LINC00846Q9NV44 126 aa11.23□□□□□ -0.61
SSPN-204ENST00000535504 CASC2Q6XLA1 102 aa11.17□□□□□ -0.62
SSPN-204ENST00000535504 WFDC13Q8IUB5 93 aa11.16□□□□□ -0.62
SSPN-204ENST00000535504 Q8N9L7 120 aa11.15□□□□□ -0.62
SSPN-204ENST00000535504 SPINK7P58062 85 aa11.14□□□□□ -0.63
SSPN-204ENST00000535504 ACYP1P07311 99 aa11.09□□□□□ -0.63
SSPN-204ENST00000535504 HRES1P13985 223 aa11.09□□□□□ -0.63
SSPN-204ENST00000535504 HCG22E2RYF7 251 aa11.08□□□□□ -0.64
SSPN-204ENST00000535504 CXCL6P80162 114 aa11.08□□□□□ -0.64
SSPN-204ENST00000535504 MPLKIPQ8TAP9 179 aa11.02□□□□□ -0.65
SSPN-204ENST00000535504 KRTAP10-6P60371 365 aaPredicted RBP11.01□□□□□ -0.65
SSPN-204ENST00000535504 KRTAP9-2Q9BYQ4 174 aa11.01□□□□□ -0.65
SSPN-204ENST00000535504 FAM240AA0A1B0GVK7 77 aa11□□□□□ -0.65
SSPN-204ENST00000535504 FLGP20930 4061 aaPredicted RBP10.97□□□□□ -0.65
SSPN-204ENST00000535504 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.65
SSPN-204ENST00000535504 A0A1B0GV90 55 aa10.96□□□□□ -0.65
SSPN-204ENST00000535504 IGKV2-30P06310 120 aa10.96□□□□□ -0.65
SSPN-204ENST00000535504 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
SSPN-204ENST00000535504 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
SSPN-204ENST00000535504 ATP5EP2Q5VTU8 51 aa10.95□□□□□ -0.66
SSPN-204ENST00000535504 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
SSPN-204ENST00000535504 Q5W150 140 aa10.89□□□□□ -0.67
SSPN-204ENST00000535504 LCE2DQ5TA82 110 aaPredicted RBP10.87□□□□□ -0.67
SSPN-204ENST00000535504 J3QR89 54 aa10.84□□□□□ -0.67
SSPN-204ENST00000535504 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
SSPN-204ENST00000535504 LINC00643Q86TS7 51 aa10.8□□□□□ -0.68
SSPN-204ENST00000535504 H1FX-AS1Q4G0G2 97 aa10.75□□□□□ -0.69
SSPN-204ENST00000535504 C4orf26Q17RF5 130 aa10.68□□□□□ -0.7
SSPN-204ENST00000535504 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
SSPN-204ENST00000535504 UQCRQO14949 82 aa10.63□□□□□ -0.71
SSPN-204ENST00000535504 KRTAP9-8Q9BYQ0 159 aa10.63□□□□□ -0.71
SSPN-204ENST00000535504 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
SSPN-204ENST00000535504 A0A087WVE0 104 aa10.6□□□□□ -0.71
SSPN-204ENST00000535504 ATOX1O00244 68 aa10.6□□□□□ -0.71
SSPN-204ENST00000535504 KRTAP9-6A0A140TA67 174 aa10.58□□□□□ -0.72
SSPN-204ENST00000535504 KRTAP10-10P60014 251 aa10.56□□□□□ -0.72
SSPN-204ENST00000535504 C1orf64Q8NEQ6 169 aa10.56□□□□□ -0.72
SSPN-204ENST00000535504 MT2AP02795 61 aa10.55□□□□□ -0.72
SSPN-204ENST00000535504 H0Y9P7 68 aa10.54□□□□□ -0.72
SSPN-204ENST00000535504 CYP4F30PQ9H0H9 118 aa10.54□□□□□ -0.72
SSPN-204ENST00000535504 K7ERU9 68 aa10.48□□□□□ -0.73
SSPN-204ENST00000535504 MP68P56378 58 aa10.48□□□□□ -0.73
SSPN-204ENST00000535504 CRCT1Q9UGL9 99 aa10.48□□□□□ -0.73
SSPN-204ENST00000535504 S4R3F8 94 aa10.48□□□□□ -0.73
SSPN-204ENST00000535504 SCGB1A1P11684 91 aa10.47□□□□□ -0.73
SSPN-204ENST00000535504 MT1FP04733 61 aa10.46□□□□□ -0.73
SSPN-204ENST00000535504 C5orf47Q569G3 176 aa10.39□□□□□ -0.75
SSPN-204ENST00000535504 LINC00208Q96KT6 92 aa10.39□□□□□ -0.75
SSPN-204ENST00000535504 CSAG1Q6PB30 78 aa10.38□□□□□ -0.75
SSPN-204ENST00000535504 KRTAP3-1Q9BYR8 98 aa10.38□□□□□ -0.75
SSPN-204ENST00000535504 OCR1Q9BZK8 76 aa10.37□□□□□ -0.75
SSPN-204ENST00000535504 FSIP2Q5CZC0 6907 aa10.37□□□□□ -0.75
SSPN-204ENST00000535504 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
SSPN-204ENST00000535504 H3BPC8 53 aa10.32□□□□□ -0.76
SSPN-204ENST00000535504 LCA10Q71F78 164 aa10.32□□□□□ -0.76
SSPN-204ENST00000535504 KRTAP9-3Q9BYQ3 159 aa10.3□□□□□ -0.76
SSPN-204ENST00000535504 FAM236AA0A1B0GUQ0 79 aa10.29□□□□□ -0.76
SSPN-204ENST00000535504 FAM236BA0A1B0GV22 79 aa10.29□□□□□ -0.76
SSPN-204ENST00000535504 A8MUN3 132 aa10.27□□□□□ -0.77
SSPN-204ENST00000535504 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
SSPN-204ENST00000535504 SMIM20Q8N5G0 67 aa10.23□□□□□ -0.77
SSPN-204ENST00000535504 NDUFC1O43677 76 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms