RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
HDAC4-214ENST00000535493 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
HDAC4-214ENST00000535493 LOC101927531A0A1B0GV80 90 aa7.99□□□□□ -1.13
HDAC4-214ENST00000535493 MDFIQ99750 246 aa7.99□□□□□ -1.13
HDAC4-214ENST00000535493 Q5W150 140 aa7.98□□□□□ -1.13
HDAC4-214ENST00000535493 Q6ZR54 194 aa7.98□□□□□ -1.13
HDAC4-214ENST00000535493 WWC2-AS2Q96NR7 200 aa7.98□□□□□ -1.13
HDAC4-214ENST00000535493 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
HDAC4-214ENST00000535493 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
HDAC4-214ENST00000535493 MRPL34Q9BQ48 92 aaKnown RBP7.98□□□□□ -1.13
HDAC4-214ENST00000535493 DNAH6Q9C0G6 4158 aa7.97□□□□□ -1.13
HDAC4-214ENST00000535493 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
HDAC4-214ENST00000535493 SPACA4Q8TDM5 124 aa7.97□□□□□ -1.13
HDAC4-214ENST00000535493 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.14
HDAC4-214ENST00000535493 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
HDAC4-214ENST00000535493 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
HDAC4-214ENST00000535493 PRKDCP78527 4128 aaKnown RBP7.94□□□□□ -1.14
HDAC4-214ENST00000535493 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
HDAC4-214ENST00000535493 KTN1-AS1Q86SY8 53 aa7.93□□□□□ -1.14
HDAC4-214ENST00000535493 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
HDAC4-214ENST00000535493 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
HDAC4-214ENST00000535493 A6NN06 94 aa7.91□□□□□ -1.14
HDAC4-214ENST00000535493 LINC00483Q53H64 154 aa7.91□□□□□ -1.14
HDAC4-214ENST00000535493 RBM12B-AS1Q9P1G2 102 aa7.9□□□□□ -1.15
HDAC4-214ENST00000535493 IGLV5-52A0A0A0MRZ9 124 aa7.89□□□□□ -1.15
HDAC4-214ENST00000535493 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
HDAC4-214ENST00000535493 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
HDAC4-214ENST00000535493 A0A087WTM6 91 aa7.88□□□□□ -1.15
HDAC4-214ENST00000535493 RTL8CO15255 209 aa7.87□□□□□ -1.15
HDAC4-214ENST00000535493 DNAH11Q96DT5 4516 aa7.87□□□□□ -1.15
HDAC4-214ENST00000535493 ZNF861PO60384 105 aa7.87□□□□□ -1.15
HDAC4-214ENST00000535493 ZNF706Q9Y5V0 76 aaPredicted RBP7.84□□□□□ -1.15
HDAC4-214ENST00000535493 KRTAP13-3Q3SY46 172 aa7.81□□□□□ -1.16
HDAC4-214ENST00000535493 PRAC1Q96KF2 57 aa7.78□□□□□ -1.16
HDAC4-214ENST00000535493 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
HDAC4-214ENST00000535493 ADM2Q7Z4H4 148 aa7.77□□□□□ -1.17
HDAC4-214ENST00000535493 NUPR2A6NF83 97 aa7.76□□□□□ -1.17
HDAC4-214ENST00000535493 ACYP2P14621 99 aa7.76□□□□□ -1.17
HDAC4-214ENST00000535493 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
HDAC4-214ENST00000535493 DNAH5Q8TE73 4624 aa7.76□□□□□ -1.17
HDAC4-214ENST00000535493 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
HDAC4-214ENST00000535493 LINC00313P59037 77 aa7.72□□□□□ -1.17
HDAC4-214ENST00000535493 VPS13BQ7Z7G8 4022 aa7.7□□□□□ -1.18
HDAC4-214ENST00000535493 IGKV2D-30A0A075B6S6 120 aa7.69□□□□□ -1.18
HDAC4-214ENST00000535493 A0A1B0GU69 56 aa7.69□□□□□ -1.18
HDAC4-214ENST00000535493 IGKV2-30P06310 120 aa7.69□□□□□ -1.18
HDAC4-214ENST00000535493 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
HDAC4-214ENST00000535493 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
HDAC4-214ENST00000535493 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.18
HDAC4-214ENST00000535493 DNHD1Q96M86 4753 aa7.65□□□□□ -1.18
HDAC4-214ENST00000535493 KRTAP10-2P60368 255 aa7.65□□□□□ -1.19
HDAC4-214ENST00000535493 HYDINQ4G0P3 5121 aa7.64□□□□□ -1.19
HDAC4-214ENST00000535493 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
HDAC4-214ENST00000535493 C1orf134Q5TEV5 83 aa7.63□□□□□ -1.19
HDAC4-214ENST00000535493 LY6G6CO95867 125 aa7.63□□□□□ -1.19
HDAC4-214ENST00000535493 SPINK1P00995 79 aa7.63□□□□□ -1.19
HDAC4-214ENST00000535493 C8orf87E5RJ46 101 aa7.62□□□□□ -1.19
HDAC4-214ENST00000535493 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
HDAC4-214ENST00000535493 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
HDAC4-214ENST00000535493 MIR22HGQ0VDD5 57 aa7.58□□□□□ -1.2
HDAC4-214ENST00000535493 Q8N1X5 172 aa7.56□□□□□ -1.2
HDAC4-214ENST00000535493 PKD1P98161 4303 aa7.55□□□□□ -1.2
HDAC4-214ENST00000535493 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
HDAC4-214ENST00000535493 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
HDAC4-214ENST00000535493 UQCR11O14957 56 aa7.54□□□□□ -1.2
HDAC4-214ENST00000535493 KRTAP10-1P60331 282 aa7.51□□□□□ -1.21
HDAC4-214ENST00000535493 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
HDAC4-214ENST00000535493 FLG2Q5D862 2391 aaPredicted RBP7.49□□□□□ -1.21
HDAC4-214ENST00000535493 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
HDAC4-214ENST00000535493 C4orf48Q5BLP8 95 aa7.46□□□□□ -1.22
HDAC4-214ENST00000535493 CSAG1Q6PB30 78 aa7.45□□□□□ -1.22
HDAC4-214ENST00000535493 LINC01554Q52M75 96 aa7.42□□□□□ -1.22
HDAC4-214ENST00000535493 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
HDAC4-214ENST00000535493 FAT1Q14517 4588 aa7.4□□□□□ -1.22
HDAC4-214ENST00000535493 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
HDAC4-214ENST00000535493 Q6ZSA8 131 aa7.36□□□□□ -1.23
HDAC4-214ENST00000535493 H0YAA0 97 aa7.33□□□□□ -1.24
HDAC4-214ENST00000535493 SMR3BP02814 79 aaPredicted RBP7.32□□□□□ -1.24
HDAC4-214ENST00000535493 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
HDAC4-214ENST00000535493 H3BS24 57 aa7.28□□□□□ -1.24
HDAC4-214ENST00000535493 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.25
HDAC4-214ENST00000535493 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
HDAC4-214ENST00000535493 CRIPTQ9P021 101 aa7.27□□□□□ -1.25
HDAC4-214ENST00000535493 SACSQ9NZJ4 4579 aa7.24□□□□□ -1.25
HDAC4-214ENST00000535493 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
HDAC4-214ENST00000535493 A0A1B0GU33 70 aa7.21□□□□□ -1.25
HDAC4-214ENST00000535493 A8MUU9 505 aa7.21□□□□□ -1.26
HDAC4-214ENST00000535493 MYCBP2O75592 4640 aa7.19□□□□□ -1.26
HDAC4-214ENST00000535493 H1FX-AS1Q4G0G2 97 aa7.14□□□□□ -1.27
HDAC4-214ENST00000535493 LRP1Q07954 4544 aaKnown RBP7.14□□□□□ -1.27
HDAC4-214ENST00000535493 HSPG2P98160 4391 aa7.13□□□□□ -1.27
HDAC4-214ENST00000535493 PKHD1L1Q86WI1 4243 aa7.11□□□□□ -1.27
HDAC4-214ENST00000535493 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
HDAC4-214ENST00000535493 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
HDAC4-214ENST00000535493 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
HDAC4-214ENST00000535493 COX6B2Q6YFQ2 88 aa7.08□□□□□ -1.28
HDAC4-214ENST00000535493 A0A0D9SG42 100 aa7.03□□□□□ -1.28
HDAC4-214ENST00000535493 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
HDAC4-214ENST00000535493 FAT3Q8TDW7 4589 aa6.99□□□□□ -1.29
HDAC4-214ENST00000535493 ROMO1P60602 79 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 1235.5 ms