RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
CDCA3-204ENST00000535406 SIGMAR1Q99720 223 aa4.98□□□□□ -1.61
CDCA3-204ENST00000535406 CCKP06307 115 aa4.97□□□□□ -1.61
CDCA3-204ENST00000535406 MT1HP80294 61 aa4.97□□□□□ -1.61
CDCA3-204ENST00000535406 M0R143 59 aa4.96□□□□□ -1.62
CDCA3-204ENST00000535406 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
CDCA3-204ENST00000535406 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.62
CDCA3-204ENST00000535406 IGKV4-1P06312 121 aa4.95□□□□□ -1.62
CDCA3-204ENST00000535406 SMIM6P0DI80 62 aa4.95□□□□□ -1.62
CDCA3-204ENST00000535406 VPS25Q9BRG1 176 aa4.95□□□□□ -1.62
CDCA3-204ENST00000535406 A8MUU9 505 aa4.94□□□□□ -1.62
CDCA3-204ENST00000535406 DSCR10P59022 87 aa4.94□□□□□ -1.62
CDCA3-204ENST00000535406 RBM3P98179 157 aaKnown RBP4.94□□□□□ -1.62
CDCA3-204ENST00000535406 DSCR8Q96T75 97 aa4.94□□□□□ -1.62
CDCA3-204ENST00000535406 BAALC-AS2P0C853 105 aa4.92□□□□□ -1.62
CDCA3-204ENST00000535406 ATXN8Q156A1 80 aa4.92□□□□□ -1.62
CDCA3-204ENST00000535406 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
CDCA3-204ENST00000535406 LINC00472Q9H8W2 130 aa4.92□□□□□ -1.62
CDCA3-204ENST00000535406 LINC00313P59037 77 aa4.91□□□□□ -1.62
CDCA3-204ENST00000535406 DEFB116Q30KQ4 102 aa4.91□□□□□ -1.62
CDCA3-204ENST00000535406 C9JAW5 83 aa4.9□□□□□ -1.63
CDCA3-204ENST00000535406 TSTD3H0UI37 97 aa4.9□□□□□ -1.63
CDCA3-204ENST00000535406 M0R2T5 61 aa4.9□□□□□ -1.63
CDCA3-204ENST00000535406 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
CDCA3-204ENST00000535406 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
CDCA3-204ENST00000535406 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
CDCA3-204ENST00000535406 KRTAP16-1A8MUX0 517 aa4.88□□□□□ -1.63
CDCA3-204ENST00000535406 LYRM7Q5U5X0 104 aa4.88□□□□□ -1.63
CDCA3-204ENST00000535406 JMJD7-PLA2G4BH0Y9G9 81 aa4.87□□□□□ -1.63
CDCA3-204ENST00000535406 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
CDCA3-204ENST00000535406 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
CDCA3-204ENST00000535406 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
CDCA3-204ENST00000535406 A0A1B0GVX0 72 aa4.86□□□□□ -1.63
CDCA3-204ENST00000535406 BATFQ16520 125 aa4.86□□□□□ -1.63
CDCA3-204ENST00000535406 LOC110117498A0A087WWA1 95 aa4.85□□□□□ -1.63
CDCA3-204ENST00000535406 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
CDCA3-204ENST00000535406 J3KT08 172 aa4.85□□□□□ -1.63
CDCA3-204ENST00000535406 Q6ZQT0 140 aa4.85□□□□□ -1.63
CDCA3-204ENST00000535406 PDE6GP18545 87 aa4.83□□□□□ -1.64
CDCA3-204ENST00000535406 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
CDCA3-204ENST00000535406 C14orf132Q9NPU4 83 aa4.83□□□□□ -1.64
CDCA3-204ENST00000535406 A0A1B0GW54 56 aa4.82□□□□□ -1.64
CDCA3-204ENST00000535406 NDUFB1O75438 58 aa4.81□□□□□ -1.64
CDCA3-204ENST00000535406 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
CDCA3-204ENST00000535406 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
CDCA3-204ENST00000535406 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CDCA3-204ENST00000535406 A8MWP4 228 aa4.78□□□□□ -1.64
CDCA3-204ENST00000535406 TAX1BP3O14907 124 aa4.78□□□□□ -1.64
CDCA3-204ENST00000535406 A0A1W2PPM0 123 aa4.77□□□□□ -1.65
CDCA3-204ENST00000535406 H3BT86 120 aa4.77□□□□□ -1.65
CDCA3-204ENST00000535406 MTURNQ8N3F0 131 aa4.77□□□□□ -1.65
CDCA3-204ENST00000535406 ZCCHC13Q8WW36 166 aaKnown RBP4.77□□□□□ -1.65
CDCA3-204ENST00000535406 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
CDCA3-204ENST00000535406 C8orf17Q9NRJ1 99 aa4.77□□□□□ -1.65
CDCA3-204ENST00000535406 RBM12B-AS1Q9P1G2 102 aa4.77□□□□□ -1.65
CDCA3-204ENST00000535406 IGKV3D-7A0A0C4DH55 119 aa4.76□□□□□ -1.65
CDCA3-204ENST00000535406 HRES1P13985 223 aa4.76□□□□□ -1.65
CDCA3-204ENST00000535406 NREPQ16612 68 aa4.76□□□□□ -1.65
CDCA3-204ENST00000535406 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
CDCA3-204ENST00000535406 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
CDCA3-204ENST00000535406 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
CDCA3-204ENST00000535406 Q6ZVQ6 151 aa4.73□□□□□ -1.65
CDCA3-204ENST00000535406 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
CDCA3-204ENST00000535406 PCP4L1A6NKN8 68 aa4.72□□□□□ -1.65
CDCA3-204ENST00000535406 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
CDCA3-204ENST00000535406 SPCS1Q9Y6A9 102 aa4.72□□□□□ -1.65
CDCA3-204ENST00000535406 SPINK7P58062 85 aa4.72□□□□□ -1.65
CDCA3-204ENST00000535406 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
CDCA3-204ENST00000535406 K7EQZ3 153 aa4.7□□□□□ -1.66
CDCA3-204ENST00000535406 TMEM254Q8TBM7 123 aa4.7□□□□□ -1.66
CDCA3-204ENST00000535406 MRPL34Q9BQ48 92 aaKnown RBP4.7□□□□□ -1.66
CDCA3-204ENST00000535406 BPY2O14599 106 aa4.69□□□□□ -1.66
CDCA3-204ENST00000535406 COL5A1-AS1Q5SY13 56 aa4.69□□□□□ -1.66
CDCA3-204ENST00000535406 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
CDCA3-204ENST00000535406 NDUFS5O43920 106 aa4.67□□□□□ -1.66
CDCA3-204ENST00000535406 WFDC13Q8IUB5 93 aa4.67□□□□□ -1.66
CDCA3-204ENST00000535406 K7EP34 96 aa4.65□□□□□ -1.67
CDCA3-204ENST00000535406 MT2AP02795 61 aa4.64□□□□□ -1.67
CDCA3-204ENST00000535406 Q8N9L7 120 aa4.63□□□□□ -1.67
CDCA3-204ENST00000535406 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
CDCA3-204ENST00000535406 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CDCA3-204ENST00000535406 CASC2Q6XLA1 102 aa4.61□□□□□ -1.67
CDCA3-204ENST00000535406 UBL5Q9BZL1 73 aa4.61□□□□□ -1.67
CDCA3-204ENST00000535406 MT1FP04733 61 aa4.6□□□□□ -1.67
CDCA3-204ENST00000535406 LINC00846Q9NV44 126 aa4.6□□□□□ -1.67
CDCA3-204ENST00000535406 IGKV2D-30A0A075B6S6 120 aa4.59□□□□□ -1.67
CDCA3-204ENST00000535406 HCG22E2RYF7 251 aa4.59□□□□□ -1.67
CDCA3-204ENST00000535406 C7orf65Q6ZTY9 151 aa4.59□□□□□ -1.67
CDCA3-204ENST00000535406 GTF2H5Q6ZYL4 71 aa4.59□□□□□ -1.67
CDCA3-204ENST00000535406 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
CDCA3-204ENST00000535406 Q5W150 140 aa4.57□□□□□ -1.68
CDCA3-204ENST00000535406 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
CDCA3-204ENST00000535406 USH2AO75445 5202 aa4.56□□□□□ -1.68
CDCA3-204ENST00000535406 CXCL6P80162 114 aa4.56□□□□□ -1.68
CDCA3-204ENST00000535406 F8W1H4 67 aa4.55□□□□□ -1.68
CDCA3-204ENST00000535406 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
CDCA3-204ENST00000535406 ETDBQ3ZM63 59 aa4.53□□□□□ -1.68
CDCA3-204ENST00000535406 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
CDCA3-204ENST00000535406 A0A1B0GV90 55 aa4.5□□□□□ -1.69
CDCA3-204ENST00000535406 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms