RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PRLHP81277 87 aa7.46□□□□□ -1.21
SCARB1-204ENST00000535005 Q9BRP9 147 aa7.44□□□□□ -1.22
SCARB1-204ENST00000535005 MP68P56378 58 aa7.43□□□□□ -1.22
SCARB1-204ENST00000535005 SPINK6Q6UWN8 80 aa7.43□□□□□ -1.22
SCARB1-204ENST00000535005 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
SCARB1-204ENST00000535005 K7EQZ3 153 aa7.42□□□□□ -1.22
SCARB1-204ENST00000535005 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
SCARB1-204ENST00000535005 IGLV8-61A0A075B6I0 122 aa7.41□□□□□ -1.22
SCARB1-204ENST00000535005 SEC61GP60059 68 aa7.41□□□□□ -1.22
SCARB1-204ENST00000535005 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
SCARB1-204ENST00000535005 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
SCARB1-204ENST00000535005 ST20-AS1Q8NBB2 130 aa7.36□□□□□ -1.23
SCARB1-204ENST00000535005 LIMD2Q9BT23 127 aa7.36□□□□□ -1.23
SCARB1-204ENST00000535005 ZNF706Q9Y5V0 76 aaPredicted RBP7.36□□□□□ -1.23
SCARB1-204ENST00000535005 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
SCARB1-204ENST00000535005 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.24
SCARB1-204ENST00000535005 SPRR1BP22528 89 aa7.34□□□□□ -1.24
SCARB1-204ENST00000535005 LINC00483Q53H64 154 aa7.34□□□□□ -1.24
SCARB1-204ENST00000535005 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
SCARB1-204ENST00000535005 IGFL1Q6UW32 110 aa7.32□□□□□ -1.24
SCARB1-204ENST00000535005 PSPHP1O15172 72 aa7.31□□□□□ -1.24
SCARB1-204ENST00000535005 LINC00208Q96KT6 92 aa7.31□□□□□ -1.24
SCARB1-204ENST00000535005 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
SCARB1-204ENST00000535005 H0Y9P7 68 aa7.29□□□□□ -1.24
SCARB1-204ENST00000535005 Q5VV11 94 aa7.29□□□□□ -1.24
SCARB1-204ENST00000535005 FLG2Q5D862 2391 aaPredicted RBP7.28□□□□□ -1.24
SCARB1-204ENST00000535005 A8MUN3 132 aa7.28□□□□□ -1.24
SCARB1-204ENST00000535005 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
SCARB1-204ENST00000535005 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
SCARB1-204ENST00000535005 WFDC13Q8IUB5 93 aa7.27□□□□□ -1.25
SCARB1-204ENST00000535005 A8MWP4 228 aa7.27□□□□□ -1.25
SCARB1-204ENST00000535005 Q8N9P0 234 aaPredicted RBP7.27□□□□□ -1.25
SCARB1-204ENST00000535005 A0A087WSZ3 146 aa7.26□□□□□ -1.25
SCARB1-204ENST00000535005 CD164Q04900 197 aa7.26□□□□□ -1.25
SCARB1-204ENST00000535005 Q75L30 129 aa7.25□□□□□ -1.25
SCARB1-204ENST00000535005 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
SCARB1-204ENST00000535005 A0A087X002 238 aa7.24□□□□□ -1.25
SCARB1-204ENST00000535005 LOC101927531A0A1B0GV80 90 aa7.24□□□□□ -1.25
SCARB1-204ENST00000535005 PRR4Q16378 134 aa7.24□□□□□ -1.25
SCARB1-204ENST00000535005 LRP1Q07954 4544 aaKnown RBP7.23□□□□□ -1.25
SCARB1-204ENST00000535005 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
SCARB1-204ENST00000535005 KRTAP13-2Q52LG2 175 aa7.22□□□□□ -1.25
SCARB1-204ENST00000535005 PRR26Q8N8Z3 221 aa7.22□□□□□ -1.25
SCARB1-204ENST00000535005 IGLV7-46A0A075B6I9 117 aa7.22□□□□□ -1.25
SCARB1-204ENST00000535005 CHKB-CPT1BH3BT56 60 aa7.22□□□□□ -1.25
SCARB1-204ENST00000535005 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
SCARB1-204ENST00000535005 ATP11AUNQ6ZP68 121 aa7.22□□□□□ -1.25
SCARB1-204ENST00000535005 LINC00472Q9H8W2 130 aa7.22□□□□□ -1.25
SCARB1-204ENST00000535005 TP53AIP1Q9HCN2 124 aa7.21□□□□□ -1.26
SCARB1-204ENST00000535005 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
SCARB1-204ENST00000535005 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
SCARB1-204ENST00000535005 IGLV9-49A0A0B4J1Y8 123 aa7.19□□□□□ -1.26
SCARB1-204ENST00000535005 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
SCARB1-204ENST00000535005 TYMSOSQ8TAI1 123 aa7.19□□□□□ -1.26
SCARB1-204ENST00000535005 NDUFS5O43920 106 aa7.18□□□□□ -1.26
SCARB1-204ENST00000535005 MOBPQ13875 183 aa7.18□□□□□ -1.26
SCARB1-204ENST00000535005 COA5Q86WW8 74 aa7.17□□□□□ -1.26
SCARB1-204ENST00000535005 TNXBP22105 4242 aa7.17□□□□□ -1.26
SCARB1-204ENST00000535005 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
SCARB1-204ENST00000535005 DEFB116Q30KQ4 102 aa7.17□□□□□ -1.26
SCARB1-204ENST00000535005 MMP24-AS1A0A0U1RRL7 71 aa7.16□□□□□ -1.26
SCARB1-204ENST00000535005 PCLOQ9Y6V0 5065 aa7.16□□□□□ -1.26
SCARB1-204ENST00000535005 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
SCARB1-204ENST00000535005 CDC42SE1Q9NRR8 79 aa7.15□□□□□ -1.27
SCARB1-204ENST00000535005 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.27
SCARB1-204ENST00000535005 A0A0G2JQZ4 141 aa7.13□□□□□ -1.27
SCARB1-204ENST00000535005 A6NED7 52 aa7.12□□□□□ -1.27
SCARB1-204ENST00000535005 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
SCARB1-204ENST00000535005 LINC00304Q8N9R0 145 aa7.11□□□□□ -1.27
SCARB1-204ENST00000535005 A6NN06 94 aa7.09□□□□□ -1.27
SCARB1-204ENST00000535005 LCA10Q71F78 164 aa7.09□□□□□ -1.27
SCARB1-204ENST00000535005 C4orf48Q5BLP8 95 aa7.08□□□□□ -1.28
SCARB1-204ENST00000535005 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
SCARB1-204ENST00000535005 J3QL48 77 aa7.08□□□□□ -1.28
SCARB1-204ENST00000535005 SPINK1P00995 79 aa7.08□□□□□ -1.28
SCARB1-204ENST00000535005 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
SCARB1-204ENST00000535005 SPTSSBQ8NFR3 76 aa7.06□□□□□ -1.28
SCARB1-204ENST00000535005 A8MU10 97 aa7.05□□□□□ -1.28
SCARB1-204ENST00000535005 C8orf17Q9NRJ1 99 aa7.05□□□□□ -1.28
SCARB1-204ENST00000535005 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
SCARB1-204ENST00000535005 Q96NJ1 140 aa7.04□□□□□ -1.28
SCARB1-204ENST00000535005 A0A1B0GVX0 72 aa7.02□□□□□ -1.29
SCARB1-204ENST00000535005 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
SCARB1-204ENST00000535005 RBM12B-AS1Q9P1G2 102 aa7.02□□□□□ -1.29
SCARB1-204ENST00000535005 PCOTHQ58A44 107 aa7□□□□□ -1.29
SCARB1-204ENST00000535005 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
SCARB1-204ENST00000535005 HRES1P13985 223 aa6.99□□□□□ -1.29
SCARB1-204ENST00000535005 IGHV6-1A0A0B4J1U7 121 aa6.92□□□□□ -1.3
SCARB1-204ENST00000535005 HERC1Q15751 4861 aa6.92□□□□□ -1.3
SCARB1-204ENST00000535005 ACYP2P14621 99 aa6.92□□□□□ -1.3
SCARB1-204ENST00000535005 SPINK7P58062 85 aa6.91□□□□□ -1.3
SCARB1-204ENST00000535005 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
SCARB1-204ENST00000535005 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
SCARB1-204ENST00000535005 RETNLBQ9BQ08 111 aa6.89□□□□□ -1.31
SCARB1-204ENST00000535005 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
SCARB1-204ENST00000535005 HMCN2Q8NDA2 5059 aa6.82□□□□□ -1.32
SCARB1-204ENST00000535005 SPATA8Q6RVD6 105 aa6.79□□□□□ -1.32
SCARB1-204ENST00000535005 Q5W150 140 aa6.78□□□□□ -1.32
SCARB1-204ENST00000535005 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
SCARB1-204ENST00000535005 NOTCH2NLQ7Z3S9 236 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms