RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 LAMA5O15230 3695 aa7.22□□□□□ -1.25
AMBRA1-212ENST00000534300 UTP20O75691 2785 aaKnown RBP7.21□□□□□ -1.26
AMBRA1-212ENST00000534300 R4GN34 69 aa7.21□□□□□ -1.26
AMBRA1-212ENST00000534300 KRTAP10-1P60331 282 aa7.2□□□□□ -1.26
AMBRA1-212ENST00000534300 KRTAP4-16G5E9R7 235 aaPredicted RBP7.19□□□□□ -1.26
AMBRA1-212ENST00000534300 KRTAP10-2P60368 255 aa7.18□□□□□ -1.26
AMBRA1-212ENST00000534300 WDFY3Q8IZQ1 3526 aa7.18□□□□□ -1.26
AMBRA1-212ENST00000534300 ZFHX4Q86UP3 3567 aa7.16□□□□□ -1.26
AMBRA1-212ENST00000534300 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.27
AMBRA1-212ENST00000534300 ASH1LQ9NR48 2969 aaKnown RBP7.14□□□□□ -1.27
AMBRA1-212ENST00000534300 TACC2O95359 2948 aa7.12□□□□□ -1.27
AMBRA1-212ENST00000534300 ADGRG4Q8IZF6 3080 aa7.11□□□□□ -1.27
AMBRA1-212ENST00000534300 SEC61BP60468 96 aaKnown RBP7.07□□□□□ -1.28
AMBRA1-212ENST00000534300 A0A087X002 238 aa7.07□□□□□ -1.28
AMBRA1-212ENST00000534300 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
AMBRA1-212ENST00000534300 M0QZ58 72 aa7.04□□□□□ -1.28
AMBRA1-212ENST00000534300 SMG1Q96Q15 3661 aaKnown RBP7.04□□□□□ -1.28
AMBRA1-212ENST00000534300 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
AMBRA1-212ENST00000534300 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
AMBRA1-212ENST00000534300 RELNP78509 3460 aa7.03□□□□□ -1.28
AMBRA1-212ENST00000534300 PANO1I0J062 215 aa7.02□□□□□ -1.29
AMBRA1-212ENST00000534300 A8MU10 97 aa7.02□□□□□ -1.29
AMBRA1-212ENST00000534300 CRYBG3Q68DQ2 2970 aa7.01□□□□□ -1.29
AMBRA1-212ENST00000534300 NDUFAF8A1L188 74 aa7□□□□□ -1.29
AMBRA1-212ENST00000534300 M0R2T5 61 aa7□□□□□ -1.29
AMBRA1-212ENST00000534300 NOTCH2NLQ7Z3S9 236 aa7□□□□□ -1.29
AMBRA1-212ENST00000534300 NBEAL2Q6ZNJ1 2754 aa7□□□□□ -1.29
AMBRA1-212ENST00000534300 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
AMBRA1-212ENST00000534300 HRNRQ86YZ3 2850 aaPredicted RBP6.99□□□□□ -1.29
AMBRA1-212ENST00000534300 LRBAP50851 2863 aa6.97□□□□□ -1.29
AMBRA1-212ENST00000534300 BSNQ9UPA5 3926 aa6.94□□□□□ -1.3
AMBRA1-212ENST00000534300 FBN2P35556 2912 aa6.94□□□□□ -1.3
AMBRA1-212ENST00000534300 DCHS2Q6V1P9 2916 aa6.94□□□□□ -1.3
AMBRA1-212ENST00000534300 PDZD2O15018 2839 aa6.92□□□□□ -1.3
AMBRA1-212ENST00000534300 PLAC4Q8WY50 150 aa6.9□□□□□ -1.3
AMBRA1-212ENST00000534300 ZANQ9Y493 2812 aa6.87□□□□□ -1.31
AMBRA1-212ENST00000534300 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
AMBRA1-212ENST00000534300 A8MUU9 505 aa6.83□□□□□ -1.32
AMBRA1-212ENST00000534300 OTOGQ6ZRI0 2925 aa6.83□□□□□ -1.32
AMBRA1-212ENST00000534300 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
AMBRA1-212ENST00000534300 KRTAP7-1Q8IUC3 87 aa6.81□□□□□ -1.32
AMBRA1-212ENST00000534300 MXRA5Q9NR99 2828 aa6.8□□□□□ -1.32
AMBRA1-212ENST00000534300 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
AMBRA1-212ENST00000534300 NF1P21359 2839 aa6.76□□□□□ -1.33
AMBRA1-212ENST00000534300 KRTAP13-1Q8IUC0 172 aa6.76□□□□□ -1.33
AMBRA1-212ENST00000534300 SPENQ96T58 3664 aaKnown RBP6.75□□□□□ -1.33
AMBRA1-212ENST00000534300 NBPF19A0A087WUL8 3843 aa6.68□□□□□ -1.34
AMBRA1-212ENST00000534300 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
AMBRA1-212ENST00000534300 CELSR1Q9NYQ6 3014 aa6.65□□□□□ -1.34
AMBRA1-212ENST00000534300 TNP1P09430 55 aa6.63□□□□□ -1.35
AMBRA1-212ENST00000534300 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
AMBRA1-212ENST00000534300 TENM3Q9P273 2699 aa6.62□□□□□ -1.35
AMBRA1-212ENST00000534300 TENM2Q9NT68 2774 aa6.62□□□□□ -1.35
AMBRA1-212ENST00000534300 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
AMBRA1-212ENST00000534300 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
AMBRA1-212ENST00000534300 TENM1Q9UKZ4 2725 aa6.6□□□□□ -1.35
AMBRA1-212ENST00000534300 CSMD2Q7Z408 3487 aa6.58□□□□□ -1.36
AMBRA1-212ENST00000534300 P0C880 135 aa6.55□□□□□ -1.36
AMBRA1-212ENST00000534300 H0YAA0 97 aa6.55□□□□□ -1.36
AMBRA1-212ENST00000534300 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
AMBRA1-212ENST00000534300 ZFHX3Q15911 3703 aa6.51□□□□□ -1.37
AMBRA1-212ENST00000534300 ANK3Q12955 4377 aaKnown RBP6.47□□□□□ -1.37
AMBRA1-212ENST00000534300 AKAP9Q99996 3911 aa6.45□□□□□ -1.38
AMBRA1-212ENST00000534300 FBN1P35555 2871 aaKnown RBP6.44□□□□□ -1.38
AMBRA1-212ENST00000534300 PKD1L1Q8TDX9 2849 aa6.43□□□□□ -1.38
AMBRA1-212ENST00000534300 TPRXLQ17RH7 258 aa6.4□□□□□ -1.39
AMBRA1-212ENST00000534300 KRTAP1-4P0C5Y4 121 aa6.4□□□□□ -1.39
AMBRA1-212ENST00000534300 ZNF469Q96JG9 3925 aaPredicted RBP6.39□□□□□ -1.39
AMBRA1-212ENST00000534300 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
AMBRA1-212ENST00000534300 FBN3Q75N90 2809 aa6.31□□□□□ -1.4
AMBRA1-212ENST00000534300 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
AMBRA1-212ENST00000534300 VWFP04275 2813 aa6.28□□□□□ -1.4
AMBRA1-212ENST00000534300 SVEP1Q4LDE5 3571 aa6.28□□□□□ -1.4
AMBRA1-212ENST00000534300 XP32Q5T750 250 aa6.28□□□□□ -1.4
AMBRA1-212ENST00000534300 TGP01266 2768 aa6.27□□□□□ -1.41
AMBRA1-212ENST00000534300 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
AMBRA1-212ENST00000534300 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
AMBRA1-212ENST00000534300 CUBNO60494 3623 aa6.08□□□□□ -1.44
AMBRA1-212ENST00000534300 DNHD1Q96M86 4753 aa6.05□□□□□ -1.44
AMBRA1-212ENST00000534300 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
AMBRA1-212ENST00000534300 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
AMBRA1-212ENST00000534300 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
AMBRA1-212ENST00000534300 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
AMBRA1-212ENST00000534300 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
AMBRA1-212ENST00000534300 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
AMBRA1-212ENST00000534300 ANK2Q01484 3957 aa5.98□□□□□ -1.45
AMBRA1-212ENST00000534300 SRRM2Q9UQ35 2752 aaKnown RBP5.93□□□□□ -1.46
AMBRA1-212ENST00000534300 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
AMBRA1-212ENST00000534300 KRTAP3-1Q9BYR8 98 aa5.86□□□□□ -1.47
AMBRA1-212ENST00000534300 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
AMBRA1-212ENST00000534300 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
AMBRA1-212ENST00000534300 COL7A1Q02388 2944 aa5.79□□□□□ -1.48
AMBRA1-212ENST00000534300 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
AMBRA1-212ENST00000534300 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
AMBRA1-212ENST00000534300 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
AMBRA1-212ENST00000534300 INE1O15225 51 aa5.76□□□□□ -1.49
AMBRA1-212ENST00000534300 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
AMBRA1-212ENST00000534300 KRTAP10-4P60372 401 aaPredicted RBP5.73□□□□□ -1.49
AMBRA1-212ENST00000534300 ALMS1Q8TCU4 4167 aa5.72□□□□□ -1.49
AMBRA1-212ENST00000534300 CMYA5Q8N3K9 4069 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms