RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 PKD1L2Q7Z442 2459 aa-0.83□□□□□ -2.54
BRCA2-205ENST00000533776 IAPPP10997 89 aa-0.83□□□□□ -2.54
BRCA2-205ENST00000533776 NREPQ16612 68 aa-0.83□□□□□ -2.54
BRCA2-205ENST00000533776 ITSN2Q9NZM3 1697 aa-0.84□□□□□ -2.54
BRCA2-205ENST00000533776 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.84□□□□□ -2.54
BRCA2-205ENST00000533776 IFI27P40305 119 aaPredicted RBP-0.84□□□□□ -2.54
BRCA2-205ENST00000533776 KRTAP20-1Q3LI63 56 aa-0.84□□□□□ -2.54
BRCA2-205ENST00000533776 ACACAQ13085 2346 aa-0.84□□□□□ -2.54
BRCA2-205ENST00000533776 ACACBO00763 2458 aa-0.84□□□□□ -2.54
BRCA2-205ENST00000533776 ERVK-7P63135 1459 aa-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 BPTFQ12830 3046 aa-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 KANTRA0A1W2PQU2 76 aa-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 ATP5EP2Q5VTU8 51 aa-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 ST20Q9HBF5 79 aa-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 DCAF1Q9Y4B6 1507 aa-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 ANKRD36CQ5JPF3 1778 aa-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 PARP4Q9UKK3 1724 aaKnown RBP-0.86□□□□□ -2.55
BRCA2-205ENST00000533776 CCDC168Q8NDH2 2452 aa-0.87□□□□□ -2.55
BRCA2-205ENST00000533776 KDM5DQ9BY66 1539 aa-0.87□□□□□ -2.55
BRCA2-205ENST00000533776 DEFB131BA0A096LNP1 70 aa-0.87□□□□□ -2.55
BRCA2-205ENST00000533776 MT1HP80294 61 aa-0.87□□□□□ -2.55
BRCA2-205ENST00000533776 RB1CC1Q8TDY2 1594 aa-0.87□□□□□ -2.55
BRCA2-205ENST00000533776 CFAP74Q9C0B2 1584 aa-0.87□□□□□ -2.55
BRCA2-205ENST00000533776 H3BUT2 72 aa-0.88□□□□□ -2.55
BRCA2-205ENST00000533776 SMIM13P0DJ93 91 aa-0.88□□□□□ -2.55
BRCA2-205ENST00000533776 CRIP1P50238 77 aa-0.88□□□□□ -2.55
BRCA2-205ENST00000533776 GNG2P59768 71 aa-0.88□□□□□ -2.55
BRCA2-205ENST00000533776 DEFB106AQ8N104 65 aa-0.88□□□□□ -2.55
BRCA2-205ENST00000533776 KCNQ1DNQ9H478 68 aa-0.88□□□□□ -2.55
BRCA2-205ENST00000533776 ARHGAP35Q9NRY4 1499 aa-0.88□□□□□ -2.55
BRCA2-205ENST00000533776 RIF1Q5UIP0 2472 aaKnown RBP-0.89□□□□□ -2.55
BRCA2-205ENST00000533776 NRAPQ86VF7 1730 aa-0.89□□□□□ -2.55
BRCA2-205ENST00000533776 BVES-AS1Q5T3Y7 98 aa-0.89□□□□□ -2.55
BRCA2-205ENST00000533776 THOC2Q8NI27 1593 aaKnown RBP-0.89□□□□□ -2.55
BRCA2-205ENST00000533776 INO80Q9ULG1 1556 aaPredicted RBP-0.89□□□□□ -2.55
BRCA2-205ENST00000533776 NHSQ6T4R5 1651 aa-0.89□□□□□ -2.55
BRCA2-205ENST00000533776 TOGARAM1Q9Y4F4 1720 aa-0.89□□□□□ -2.55
BRCA2-205ENST00000533776 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.9□□□□□ -2.55
BRCA2-205ENST00000533776 ABCC1P33527 1531 aa-0.9□□□□□ -2.55
BRCA2-205ENST00000533776 ABCA8O94911 1581 aa-0.91□□□□□ -2.55
BRCA2-205ENST00000533776 SMARCA2P51531 1590 aa-0.91□□□□□ -2.55
BRCA2-205ENST00000533776 DEFB110Q30KQ9 67 aa-0.91□□□□□ -2.56
BRCA2-205ENST00000533776 KIAA0586Q9BVV6 1533 aa-0.91□□□□□ -2.56
BRCA2-205ENST00000533776 FRYQ5TBA9 3013 aa-0.91□□□□□ -2.56
BRCA2-205ENST00000533776 C5orf42Q9H799 3197 aa-0.92□□□□□ -2.56
BRCA2-205ENST00000533776 RPS27P42677 84 aaKnown RBP-0.92□□□□□ -2.56
BRCA2-205ENST00000533776 ADIRFQ15847 76 aa-0.92□□□□□ -2.56
BRCA2-205ENST00000533776 RPS27LQ71UM5 84 aaKnown RBP-0.92□□□□□ -2.56
BRCA2-205ENST00000533776 KIF1AQ12756 1690 aa-0.92□□□□□ -2.56
BRCA2-205ENST00000533776 A0A087WXM4 84 aa-0.93□□□□□ -2.56
BRCA2-205ENST00000533776 SMR3BP02814 79 aaPredicted RBP-0.93□□□□□ -2.56
BRCA2-205ENST00000533776 ITPR1Q14643 2758 aa-0.93□□□□□ -2.56
BRCA2-205ENST00000533776 LMTK2Q8IWU2 1503 aa-0.94□□□□□ -2.56
BRCA2-205ENST00000533776 HFM1A2PYH4 1435 aa-0.94□□□□□ -2.56
BRCA2-205ENST00000533776 WT1-ASQ06250 92 aa-0.94□□□□□ -2.56
BRCA2-205ENST00000533776 C18orf32Q8TCD1 76 aa-0.94□□□□□ -2.56
BRCA2-205ENST00000533776 S100A13Q99584 98 aa-0.94□□□□□ -2.56
BRCA2-205ENST00000533776 LRRIQ1Q96JM4 1722 aa-0.95□□□□□ -2.56
BRCA2-205ENST00000533776 DIP2AQ14689 1571 aa-0.95□□□□□ -2.56
BRCA2-205ENST00000533776 TLN2Q9Y4G6 2542 aa-0.95□□□□□ -2.56
BRCA2-205ENST00000533776 CCDC18Q5T9S5 1454 aa-0.95□□□□□ -2.56
BRCA2-205ENST00000533776 RALGAPBQ86X10 1494 aa-0.95□□□□□ -2.56
BRCA2-205ENST00000533776 CEP295Q9C0D2 2601 aa-0.96□□□□□ -2.56
BRCA2-205ENST00000533776 ENHOQ6UWT2 76 aa-0.96□□□□□ -2.56
BRCA2-205ENST00000533776 UBL5Q9BZL1 73 aa-0.96□□□□□ -2.56
BRCA2-205ENST00000533776 CHD7Q9P2D1 2997 aa-0.96□□□□□ -2.56
BRCA2-205ENST00000533776 SRCAPQ6ZRS2 3230 aa-0.96□□□□□ -2.56
BRCA2-205ENST00000533776 ASXL1Q8IXJ9 1541 aa-0.96□□□□□ -2.56
BRCA2-205ENST00000533776 IGLV5-48A0A075B6I7 105 aa-0.97□□□□□ -2.56
BRCA2-205ENST00000533776 MRPL33O75394 65 aaKnown RBP-0.97□□□□□ -2.56
BRCA2-205ENST00000533776 NCBP2-AS2Q69YL0 99 aa-0.97□□□□□ -2.56
BRCA2-205ENST00000533776 CDC42BPGQ6DT37 1551 aa-0.97□□□□□ -2.56
BRCA2-205ENST00000533776 DNAH17Q9UFH2 4485 aa-0.97□□□□□ -2.56
BRCA2-205ENST00000533776 LY75O60449 1722 aa-0.98□□□□□ -2.57
BRCA2-205ENST00000533776 CSMD1Q96PZ7 3565 aa-0.98□□□□□ -2.57
BRCA2-205ENST00000533776 DEFB1P60022 68 aa-0.98□□□□□ -2.57
BRCA2-205ENST00000533776 KRTAP8-1Q8IUC2 63 aa-0.98□□□□□ -2.57
BRCA2-205ENST00000533776 C3P01024 1663 aa-0.98□□□□□ -2.57
BRCA2-205ENST00000533776 RRBP1Q9P2E9 1410 aaKnown RBP-0.98□□□□□ -2.57
BRCA2-205ENST00000533776 DNAH5Q8TE73 4624 aa-0.99□□□□□ -2.57
BRCA2-205ENST00000533776 ETDCA0A1B0GVM5 59 aa-0.99□□□□□ -2.57
BRCA2-205ENST00000533776 MYO5CQ9NQX4 1742 aa-0.99□□□□□ -2.57
BRCA2-205ENST00000533776 ANKARQ7Z5J8 1434 aa-0.99□□□□□ -2.57
BRCA2-205ENST00000533776 IQGAP3Q86VI3 1631 aa-1□□□□□ -2.57
BRCA2-205ENST00000533776 SMG1Q96Q15 3661 aaKnown RBP-1.01□□□□□ -2.57
BRCA2-205ENST00000533776 MT1XP80297 61 aa-1.01□□□□□ -2.57
BRCA2-205ENST00000533776 MINOS1Q5TGZ0 78 aa-1.01□□□□□ -2.57
BRCA2-205ENST00000533776 ITPR2Q14571 2701 aa-1.01□□□□□ -2.57
BRCA2-205ENST00000533776 CDC42BPAQ5VT25 1732 aa-1.01□□□□□ -2.57
BRCA2-205ENST00000533776 MMP24-AS1A0A0U1RRL7 71 aa-1.02□□□□□ -2.57
BRCA2-205ENST00000533776 TRRAPQ9Y4A5 3859 aa-1.02□□□□□ -2.57
BRCA2-205ENST00000533776 ABCA9Q8IUA7 1624 aa-1.03□□□□□ -2.57
BRCA2-205ENST00000533776 EYSQ5T1H1 3165 aa-1.03□□□□□ -2.57
BRCA2-205ENST00000533776 MAST1Q9Y2H9 1570 aa-1.03□□□□□ -2.57
BRCA2-205ENST00000533776 ABCC6O95255 1503 aa-1.03□□□□□ -2.57
BRCA2-205ENST00000533776 DEFB114Q30KQ6 69 aa-1.03□□□□□ -2.57
BRCA2-205ENST00000533776 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.03□□□□□ -2.57
BRCA2-205ENST00000533776 CFAP46Q8IYW2 2715 aa-1.03□□□□□ -2.57
BRCA2-205ENST00000533776 CLASP1Q7Z460 1538 aa-1.04□□□□□ -2.58
BRCA2-205ENST00000533776 DNAH10Q8IVF4 4471 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms