RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 GIG44P09565 113 aaPredicted RBP4.89□□□□□ -1.63
CSRP1-218ENST00000533402 NBEAL1Q6ZS30 2694 aa4.89□□□□□ -1.63
CSRP1-218ENST00000533402 NSD1Q96L73 2696 aaPredicted RBP4.88□□□□□ -1.63
CSRP1-218ENST00000533402 ADM2Q7Z4H4 148 aa4.88□□□□□ -1.63
CSRP1-218ENST00000533402 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
CSRP1-218ENST00000533402 MXRA5Q9NR99 2828 aa4.87□□□□□ -1.63
CSRP1-218ENST00000533402 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
CSRP1-218ENST00000533402 LCE6AA0A183 80 aa4.86□□□□□ -1.63
CSRP1-218ENST00000533402 FBN2P35556 2912 aa4.85□□□□□ -1.63
CSRP1-218ENST00000533402 ZCCHC13Q8WW36 166 aaKnown RBP4.84□□□□□ -1.63
CSRP1-218ENST00000533402 A8MU10 97 aa4.84□□□□□ -1.63
CSRP1-218ENST00000533402 Q5W150 140 aa4.84□□□□□ -1.64
CSRP1-218ENST00000533402 PLAC4Q8WY50 150 aa4.83□□□□□ -1.64
CSRP1-218ENST00000533402 CSMD2Q7Z408 3487 aa4.83□□□□□ -1.64
CSRP1-218ENST00000533402 NOTCH1P46531 2555 aa4.83□□□□□ -1.64
CSRP1-218ENST00000533402 CELSR2Q9HCU4 2923 aa4.83□□□□□ -1.64
CSRP1-218ENST00000533402 KRTAP21-3Q3LHN1 58 aa4.83□□□□□ -1.64
CSRP1-218ENST00000533402 LINC00472Q9H8W2 130 aa4.83□□□□□ -1.64
CSRP1-218ENST00000533402 Q5VSD8 79 aa4.82□□□□□ -1.64
CSRP1-218ENST00000533402 Q8NDZ9 215 aa4.82□□□□□ -1.64
CSRP1-218ENST00000533402 H1FX-AS1Q4G0G2 97 aa4.81□□□□□ -1.64
CSRP1-218ENST00000533402 TNP2Q05952 138 aa4.8□□□□□ -1.64
CSRP1-218ENST00000533402 KRTAP10-3P60369 221 aa4.79□□□□□ -1.64
CSRP1-218ENST00000533402 Q6ZR54 194 aa4.78□□□□□ -1.64
CSRP1-218ENST00000533402 S4R3F8 94 aa4.77□□□□□ -1.65
CSRP1-218ENST00000533402 ZNF469Q96JG9 3925 aaPredicted RBP4.76□□□□□ -1.65
CSRP1-218ENST00000533402 NBEAL2Q6ZNJ1 2754 aa4.76□□□□□ -1.65
CSRP1-218ENST00000533402 SPRR1AP35321 89 aa4.75□□□□□ -1.65
CSRP1-218ENST00000533402 A0A087X002 238 aa4.75□□□□□ -1.65
CSRP1-218ENST00000533402 R4GN34 69 aa4.75□□□□□ -1.65
CSRP1-218ENST00000533402 PLAC8Q9NZF1 115 aa4.74□□□□□ -1.65
CSRP1-218ENST00000533402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.74□□□□□ -1.65
CSRP1-218ENST00000533402 UBR5O95071 2799 aaPredicted RBP4.74□□□□□ -1.65
CSRP1-218ENST00000533402 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
CSRP1-218ENST00000533402 KRTAP26-1Q6PEX3 210 aa4.72□□□□□ -1.65
CSRP1-218ENST00000533402 A8MUU9 505 aa4.7□□□□□ -1.66
CSRP1-218ENST00000533402 NIPBLQ6KC79 2804 aaeCLIP4.7□□□□□ -1.66
CSRP1-218ENST00000533402 SPRR1BP22528 89 aa4.69□□□□□ -1.66
CSRP1-218ENST00000533402 C20orf166-AS1Q96NR2 134 aa4.69□□□□□ -1.66
CSRP1-218ENST00000533402 CUBNO60494 3623 aa4.68□□□□□ -1.66
CSRP1-218ENST00000533402 STAB2Q8WWQ8 2551 aa4.68□□□□□ -1.66
CSRP1-218ENST00000533402 PANO1I0J062 215 aa4.68□□□□□ -1.66
CSRP1-218ENST00000533402 HIVEP1P15822 2718 aa4.67□□□□□ -1.66
CSRP1-218ENST00000533402 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
CSRP1-218ENST00000533402 M0QZ58 72 aa4.6□□□□□ -1.67
CSRP1-218ENST00000533402 KRTAP4-16G5E9R7 235 aaPredicted RBP4.57□□□□□ -1.68
CSRP1-218ENST00000533402 RPS29P62273 56 aaKnown RBP4.56□□□□□ -1.68
CSRP1-218ENST00000533402 TRRAPQ9Y4A5 3859 aa4.56□□□□□ -1.68
CSRP1-218ENST00000533402 VWFP04275 2813 aa4.54□□□□□ -1.68
CSRP1-218ENST00000533402 NOTCH2NLQ7Z3S9 236 aa4.53□□□□□ -1.68
CSRP1-218ENST00000533402 TGP01266 2768 aa4.5□□□□□ -1.69
CSRP1-218ENST00000533402 KRTAP10-1P60331 282 aa4.5□□□□□ -1.69
CSRP1-218ENST00000533402 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
CSRP1-218ENST00000533402 ANK2Q01484 3957 aa4.48□□□□□ -1.69
CSRP1-218ENST00000533402 PDZD2O15018 2839 aa4.47□□□□□ -1.69
CSRP1-218ENST00000533402 PKD1L1Q8TDX9 2849 aa4.47□□□□□ -1.69
CSRP1-218ENST00000533402 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
CSRP1-218ENST00000533402 TENM4Q6N022 2769 aa4.43□□□□□ -1.7
CSRP1-218ENST00000533402 P0C880 135 aa4.42□□□□□ -1.7
CSRP1-218ENST00000533402 H0YAA0 97 aa4.39□□□□□ -1.71
CSRP1-218ENST00000533402 KRTAP1-5Q9BYS1 174 aa4.39□□□□□ -1.71
CSRP1-218ENST00000533402 CMYA5Q8N3K9 4069 aa4.38□□□□□ -1.71
CSRP1-218ENST00000533402 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
CSRP1-218ENST00000533402 TENM1Q9UKZ4 2725 aa4.37□□□□□ -1.71
CSRP1-218ENST00000533402 Q6ZRN7 208 aaPredicted RBP4.37□□□□□ -1.71
CSRP1-218ENST00000533402 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
CSRP1-218ENST00000533402 FBN1P35555 2871 aaKnown RBP4.36□□□□□ -1.71
CSRP1-218ENST00000533402 TNP1P09430 55 aa4.33□□□□□ -1.72
CSRP1-218ENST00000533402 COL7A1Q02388 2944 aa4.32□□□□□ -1.72
CSRP1-218ENST00000533402 TENM3Q9P273 2699 aa4.3□□□□□ -1.72
CSRP1-218ENST00000533402 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
CSRP1-218ENST00000533402 LYSTQ99698 3801 aa4.29□□□□□ -1.72
CSRP1-218ENST00000533402 TENM2Q9NT68 2774 aa4.28□□□□□ -1.72
CSRP1-218ENST00000533402 OTOGQ6ZRI0 2925 aa4.28□□□□□ -1.72
CSRP1-218ENST00000533402 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
CSRP1-218ENST00000533402 CSMD3Q7Z407 3707 aa4.27□□□□□ -1.73
CSRP1-218ENST00000533402 KRTAP13-1Q8IUC0 172 aa4.26□□□□□ -1.73
CSRP1-218ENST00000533402 HECTD4Q9Y4D8 3996 aa4.23□□□□□ -1.73
CSRP1-218ENST00000533402 TPRXLQ17RH7 258 aa4.2□□□□□ -1.74
CSRP1-218ENST00000533402 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
CSRP1-218ENST00000533402 DNAH7Q8WXX0 4024 aa4.15□□□□□ -1.74
CSRP1-218ENST00000533402 KRTAP10-10P60014 251 aa4.13□□□□□ -1.75
CSRP1-218ENST00000533402 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
CSRP1-218ENST00000533402 FRAS1Q86XX4 4008 aa4.1□□□□□ -1.75
CSRP1-218ENST00000533402 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
CSRP1-218ENST00000533402 XP32Q5T750 250 aa4.05□□□□□ -1.76
CSRP1-218ENST00000533402 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
CSRP1-218ENST00000533402 SRRM2Q9UQ35 2752 aaKnown RBP4.03□□□□□ -1.76
CSRP1-218ENST00000533402 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
CSRP1-218ENST00000533402 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
CSRP1-218ENST00000533402 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
CSRP1-218ENST00000533402 KRTAP1-4P0C5Y4 121 aa4□□□□□ -1.77
CSRP1-218ENST00000533402 MEGF8Q7Z7M0 2845 aa3.99□□□□□ -1.77
CSRP1-218ENST00000533402 FBN3Q75N90 2809 aa3.98□□□□□ -1.77
CSRP1-218ENST00000533402 INE1O15225 51 aa3.98□□□□□ -1.77
CSRP1-218ENST00000533402 ANK3Q12955 4377 aaKnown RBP3.97□□□□□ -1.77
CSRP1-218ENST00000533402 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
CSRP1-218ENST00000533402 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
CSRP1-218ENST00000533402 VPS13BQ7Z7G8 4022 aa3.9□□□□□ -1.78
CSRP1-218ENST00000533402 DNAH6Q9C0G6 4158 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms