RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 VPS13DQ5THJ4 4388 aa8.92□□□□□ -0.98
CAPN1-224ENST00000533129 WWC2-AS2Q96NR7 200 aa8.91□□□□□ -0.98
CAPN1-224ENST00000533129 FBN3Q75N90 2809 aa8.91□□□□□ -0.98
CAPN1-224ENST00000533129 A0A1B0GVX0 72 aa8.91□□□□□ -0.98
CAPN1-224ENST00000533129 HRES1P13985 223 aa8.9□□□□□ -0.98
CAPN1-224ENST00000533129 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
CAPN1-224ENST00000533129 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
CAPN1-224ENST00000533129 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
CAPN1-224ENST00000533129 LINC00483Q53H64 154 aa8.88□□□□□ -0.99
CAPN1-224ENST00000533129 MRPL34Q9BQ48 92 aaKnown RBP8.88□□□□□ -0.99
CAPN1-224ENST00000533129 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
CAPN1-224ENST00000533129 PANO1I0J062 215 aa8.84□□□□□ -0.99
CAPN1-224ENST00000533129 SPINK7P58062 85 aa8.84□□□□□ -0.99
CAPN1-224ENST00000533129 LY6G6CO95867 125 aa8.84□□□□□ -1
CAPN1-224ENST00000533129 C7orf65Q6ZTY9 151 aa8.84□□□□□ -1
CAPN1-224ENST00000533129 A0A087WTM6 91 aa8.83□□□□□ -1
CAPN1-224ENST00000533129 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
CAPN1-224ENST00000533129 C1orf134Q5TEV5 83 aa8.81□□□□□ -1
CAPN1-224ENST00000533129 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
CAPN1-224ENST00000533129 A0A087X002 238 aa8.78□□□□□ -1
CAPN1-224ENST00000533129 NOTCH2NLQ7Z3S9 236 aa8.78□□□□□ -1
CAPN1-224ENST00000533129 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
CAPN1-224ENST00000533129 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
CAPN1-224ENST00000533129 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
CAPN1-224ENST00000533129 RTL8CO15255 209 aa8.73□□□□□ -1.01
CAPN1-224ENST00000533129 ALMS1Q8TCU4 4167 aa8.73□□□□□ -1.01
CAPN1-224ENST00000533129 Q5W150 140 aa8.73□□□□□ -1.01
CAPN1-224ENST00000533129 KMT2AQ03164 3969 aa8.72□□□□□ -1.01
CAPN1-224ENST00000533129 ACYP2P14621 99 aa8.72□□□□□ -1.01
CAPN1-224ENST00000533129 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
CAPN1-224ENST00000533129 TGP01266 2768 aa8.7□□□□□ -1.02
CAPN1-224ENST00000533129 IGLV5-52A0A0A0MRZ9 124 aa8.7□□□□□ -1.02
CAPN1-224ENST00000533129 PSORS1C2Q9UIG4 136 aa8.69□□□□□ -1.02
CAPN1-224ENST00000533129 ZNF861PO60384 105 aa8.67□□□□□ -1.02
CAPN1-224ENST00000533129 ANAPC11Q9NYG5 84 aa8.67□□□□□ -1.02
CAPN1-224ENST00000533129 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
CAPN1-224ENST00000533129 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
CAPN1-224ENST00000533129 DNAH17Q9UFH2 4485 aa8.65□□□□□ -1.02
CAPN1-224ENST00000533129 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
CAPN1-224ENST00000533129 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
CAPN1-224ENST00000533129 HECTD4Q9Y4D8 3996 aa8.61□□□□□ -1.03
CAPN1-224ENST00000533129 LINC00313P59037 77 aa8.61□□□□□ -1.03
CAPN1-224ENST00000533129 A0A1B0GU69 56 aa8.58□□□□□ -1.04
CAPN1-224ENST00000533129 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
CAPN1-224ENST00000533129 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
CAPN1-224ENST00000533129 FRAS1Q86XX4 4008 aa8.56□□□□□ -1.04
CAPN1-224ENST00000533129 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
CAPN1-224ENST00000533129 CIRBP-AS1Q8TBR5 109 aa8.56□□□□□ -1.04
CAPN1-224ENST00000533129 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
CAPN1-224ENST00000533129 HYDINQ4G0P3 5121 aa8.54□□□□□ -1.04
CAPN1-224ENST00000533129 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
CAPN1-224ENST00000533129 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
CAPN1-224ENST00000533129 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
CAPN1-224ENST00000533129 PRAC1Q96KF2 57 aa8.51□□□□□ -1.05
CAPN1-224ENST00000533129 DNAH11Q96DT5 4516 aa8.51□□□□□ -1.05
CAPN1-224ENST00000533129 Q6ZSA8 131 aa8.49□□□□□ -1.05
CAPN1-224ENST00000533129 UQCR11O14957 56 aa8.48□□□□□ -1.05
CAPN1-224ENST00000533129 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
CAPN1-224ENST00000533129 FAT2Q9NYQ8 4349 aa8.47□□□□□ -1.05
CAPN1-224ENST00000533129 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
CAPN1-224ENST00000533129 KRTAP10-1P60331 282 aa8.47□□□□□ -1.05
CAPN1-224ENST00000533129 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
CAPN1-224ENST00000533129 SACSQ9NZJ4 4579 aa8.46□□□□□ -1.05
CAPN1-224ENST00000533129 RETNLBQ9BQ08 111 aa8.45□□□□□ -1.06
CAPN1-224ENST00000533129 PKD1P98161 4303 aa8.43□□□□□ -1.06
CAPN1-224ENST00000533129 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
CAPN1-224ENST00000533129 LINC01554Q52M75 96 aa8.4□□□□□ -1.06
CAPN1-224ENST00000533129 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
CAPN1-224ENST00000533129 KRTAP13-2Q52LG2 175 aa8.34□□□□□ -1.07
CAPN1-224ENST00000533129 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
CAPN1-224ENST00000533129 RYR2Q92736 4967 aa8.32□□□□□ -1.08
CAPN1-224ENST00000533129 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
CAPN1-224ENST00000533129 CSAG1Q6PB30 78 aa8.25□□□□□ -1.09
CAPN1-224ENST00000533129 KMT2CQ8NEZ4 4911 aaKnown RBP8.23□□□□□ -1.09
CAPN1-224ENST00000533129 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
CAPN1-224ENST00000533129 DYNC1H1Q14204 4646 aaKnown RBP8.21□□□□□ -1.1
CAPN1-224ENST00000533129 SPINK1P00995 79 aa8.19□□□□□ -1.1
CAPN1-224ENST00000533129 KRTAP1-4P0C5Y4 121 aa8.19□□□□□ -1.1
CAPN1-224ENST00000533129 Q8N1X5 172 aa8.16□□□□□ -1.1
CAPN1-224ENST00000533129 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
CAPN1-224ENST00000533129 SMR3BP02814 79 aaPredicted RBP8.13□□□□□ -1.11
CAPN1-224ENST00000533129 H0YAA0 97 aa8.11□□□□□ -1.11
CAPN1-224ENST00000533129 APOBP04114 4563 aaKnown RBP8.11□□□□□ -1.11
CAPN1-224ENST00000533129 A8MUU9 505 aa8.11□□□□□ -1.11
CAPN1-224ENST00000533129 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
CAPN1-224ENST00000533129 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
CAPN1-224ENST00000533129 RYR3Q15413 4870 aa8.05□□□□□ -1.12
CAPN1-224ENST00000533129 A0A1B0GU33 70 aa8.03□□□□□ -1.12
CAPN1-224ENST00000533129 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
CAPN1-224ENST00000533129 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
CAPN1-224ENST00000533129 KRTAP25-1Q3LHN0 102 aa8.02□□□□□ -1.13
CAPN1-224ENST00000533129 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
CAPN1-224ENST00000533129 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
CAPN1-224ENST00000533129 FAT1Q14517 4588 aa7.97□□□□□ -1.13
CAPN1-224ENST00000533129 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
CAPN1-224ENST00000533129 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.14
CAPN1-224ENST00000533129 Q5VSD8 79 aa7.92□□□□□ -1.14
CAPN1-224ENST00000533129 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
CAPN1-224ENST00000533129 ROMO1P60602 79 aa7.88□□□□□ -1.15
CAPN1-224ENST00000533129 K7ERS5 55 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms