RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 OCR1Q9BZK8 76 aa10.91□□□□□ -0.66
SMPD1-208ENST00000533123 ATP5EP56381 51 aaPredicted RBP10.9□□□□□ -0.66
SMPD1-208ENST00000533123 LRP1Q07954 4544 aaKnown RBP10.9□□□□□ -0.66
SMPD1-208ENST00000533123 FAM229BQ4G0N7 80 aa10.89□□□□□ -0.67
SMPD1-208ENST00000533123 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
SMPD1-208ENST00000533123 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
SMPD1-208ENST00000533123 A0A0U1RQV1 116 aa10.86□□□□□ -0.67
SMPD1-208ENST00000533123 PRR26Q8N8Z3 221 aa10.86□□□□□ -0.67
SMPD1-208ENST00000533123 DEFB116Q30KQ4 102 aa10.86□□□□□ -0.67
SMPD1-208ENST00000533123 ABCA13Q86UQ4 5058 aa10.81□□□□□ -0.68
SMPD1-208ENST00000533123 DSCR10P59022 87 aa10.81□□□□□ -0.68
SMPD1-208ENST00000533123 FAT3Q8TDW7 4589 aa10.81□□□□□ -0.68
SMPD1-208ENST00000533123 TYMSOSQ8TAI1 123 aa10.8□□□□□ -0.68
SMPD1-208ENST00000533123 PRO0628Q9UI54 55 aa10.8□□□□□ -0.68
SMPD1-208ENST00000533123 SSBP3-AS1Q7Z2R9 100 aa10.78□□□□□ -0.68
SMPD1-208ENST00000533123 K7EQZ3 153 aa10.77□□□□□ -0.68
SMPD1-208ENST00000533123 LINC00472Q9H8W2 130 aa10.77□□□□□ -0.69
SMPD1-208ENST00000533123 TNXBP22105 4242 aa10.74□□□□□ -0.69
SMPD1-208ENST00000533123 Q96NJ1 140 aa10.72□□□□□ -0.69
SMPD1-208ENST00000533123 KRTAP10-8P60410 259 aa10.7□□□□□ -0.7
SMPD1-208ENST00000533123 MPLKIPQ8TAP9 179 aa10.68□□□□□ -0.7
SMPD1-208ENST00000533123 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
SMPD1-208ENST00000533123 CD164Q04900 197 aa10.66□□□□□ -0.7
SMPD1-208ENST00000533123 A8MWP4 228 aa10.65□□□□□ -0.7
SMPD1-208ENST00000533123 MT1HL1P0DM35 61 aa10.65□□□□□ -0.7
SMPD1-208ENST00000533123 C4orf48Q5BLP8 95 aa10.65□□□□□ -0.7
SMPD1-208ENST00000533123 DMBT1Q9UGM3 2413 aaPredicted RBP10.65□□□□□ -0.7
SMPD1-208ENST00000533123 ZCCHC13Q8WW36 166 aaKnown RBP10.65□□□□□ -0.71
SMPD1-208ENST00000533123 PRR15Q8IV56 129 aa10.62□□□□□ -0.71
SMPD1-208ENST00000533123 hDV103S1A0JD37 113 aa10.62□□□□□ -0.71
SMPD1-208ENST00000533123 BRK1Q8WUW1 75 aa10.62□□□□□ -0.71
SMPD1-208ENST00000533123 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
SMPD1-208ENST00000533123 HCG22E2RYF7 251 aa10.61□□□□□ -0.71
SMPD1-208ENST00000533123 SPINK1P00995 79 aa10.6□□□□□ -0.71
SMPD1-208ENST00000533123 SPAG11AQ6PDA7 123 aa10.6□□□□□ -0.71
SMPD1-208ENST00000533123 PCLOQ9Y6V0 5065 aa10.59□□□□□ -0.71
SMPD1-208ENST00000533123 WFDC13Q8IUB5 93 aa10.59□□□□□ -0.71
SMPD1-208ENST00000533123 C1orf64Q8NEQ6 169 aa10.57□□□□□ -0.72
SMPD1-208ENST00000533123 NDUFB1O75438 58 aa10.55□□□□□ -0.72
SMPD1-208ENST00000533123 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
SMPD1-208ENST00000533123 IGHV6-1A0A0B4J1U7 121 aa10.52□□□□□ -0.73
SMPD1-208ENST00000533123 MMP24-AS1A0A0U1RRL7 71 aa10.52□□□□□ -0.73
SMPD1-208ENST00000533123 J3QL48 77 aa10.52□□□□□ -0.73
SMPD1-208ENST00000533123 CASC2Q6XLA1 102 aa10.52□□□□□ -0.73
SMPD1-208ENST00000533123 A0A1B0GVX0 72 aa10.51□□□□□ -0.73
SMPD1-208ENST00000533123 LIMD2Q9BT23 127 aa10.51□□□□□ -0.73
SMPD1-208ENST00000533123 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
SMPD1-208ENST00000533123 Q1T7F1 81 aa10.5□□□□□ -0.73
SMPD1-208ENST00000533123 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
SMPD1-208ENST00000533123 C1orf195Q5TG92 126 aa10.49□□□□□ -0.73
SMPD1-208ENST00000533123 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
SMPD1-208ENST00000533123 C8orf17Q9NRJ1 99 aa10.47□□□□□ -0.73
SMPD1-208ENST00000533123 PRR4Q16378 134 aa10.46□□□□□ -0.74
SMPD1-208ENST00000533123 RETNLBQ9BQ08 111 aa10.44□□□□□ -0.74
SMPD1-208ENST00000533123 TRAV22A0A0B4J277 110 aa10.42□□□□□ -0.74
SMPD1-208ENST00000533123 MP68P56378 58 aa10.42□□□□□ -0.74
SMPD1-208ENST00000533123 LINC00208Q96KT6 92 aa10.39□□□□□ -0.75
SMPD1-208ENST00000533123 PSPHP1O15172 72 aa10.37□□□□□ -0.75
SMPD1-208ENST00000533123 H0Y9P7 68 aa10.34□□□□□ -0.75
SMPD1-208ENST00000533123 MRPL34Q9BQ48 92 aaKnown RBP10.33□□□□□ -0.76
SMPD1-208ENST00000533123 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
SMPD1-208ENST00000533123 H3BPC8 53 aa10.32□□□□□ -0.76
SMPD1-208ENST00000533123 HERC1Q15751 4861 aa10.31□□□□□ -0.76
SMPD1-208ENST00000533123 C8orf87E5RJ46 101 aa10.3□□□□□ -0.76
SMPD1-208ENST00000533123 NDUFS5O43920 106 aa10.3□□□□□ -0.76
SMPD1-208ENST00000533123 LINC00313P59037 77 aa10.3□□□□□ -0.76
SMPD1-208ENST00000533123 V9GYY9 64 aa10.29□□□□□ -0.76
SMPD1-208ENST00000533123 A8MUN3 132 aa10.28□□□□□ -0.76
SMPD1-208ENST00000533123 Q5VV11 94 aa10.23□□□□□ -0.77
SMPD1-208ENST00000533123 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
SMPD1-208ENST00000533123 KRTAP16-1A8MUX0 517 aa10.23□□□□□ -0.77
SMPD1-208ENST00000533123 IGLV7-46A0A075B6I9 117 aa10.22□□□□□ -0.77
SMPD1-208ENST00000533123 Q8N9P0 234 aaPredicted RBP10.22□□□□□ -0.77
SMPD1-208ENST00000533123 C9orf92A6NGG3 77 aa10.17□□□□□ -0.78
SMPD1-208ENST00000533123 A8MU10 97 aa10.16□□□□□ -0.78
SMPD1-208ENST00000533123 Q5W150 140 aa10.16□□□□□ -0.78
SMPD1-208ENST00000533123 PMAIP1Q13794 54 aa10.15□□□□□ -0.78
SMPD1-208ENST00000533123 LPAP08519 4548 aa10.14□□□□□ -0.79
SMPD1-208ENST00000533123 COA5Q86WW8 74 aa10.13□□□□□ -0.79
SMPD1-208ENST00000533123 PRR15LQ9BU68 103 aa10.12□□□□□ -0.79
SMPD1-208ENST00000533123 CHKB-CPT1BH3BT56 60 aa10.11□□□□□ -0.79
SMPD1-208ENST00000533123 KRTAP13-3Q3SY46 172 aa10.11□□□□□ -0.79
SMPD1-208ENST00000533123 PCOTHQ58A44 107 aa10.08□□□□□ -0.8
SMPD1-208ENST00000533123 SEC61GP60059 68 aa10.07□□□□□ -0.8
SMPD1-208ENST00000533123 LOC101927531A0A1B0GV80 90 aa10.06□□□□□ -0.8
SMPD1-208ENST00000533123 TPRXLQ17RH7 258 aa10.06□□□□□ -0.8
SMPD1-208ENST00000533123 Q75L30 129 aa10.06□□□□□ -0.8
SMPD1-208ENST00000533123 HMCN2Q8NDA2 5059 aa10.05□□□□□ -0.8
SMPD1-208ENST00000533123 LRP2P98164 4655 aa10.03□□□□□ -0.8
SMPD1-208ENST00000533123 LCA10Q71F78 164 aa10.01□□□□□ -0.81
SMPD1-208ENST00000533123 XP32Q5T750 250 aa10□□□□□ -0.81
SMPD1-208ENST00000533123 A6NED7 52 aa9.97□□□□□ -0.81
SMPD1-208ENST00000533123 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.82
SMPD1-208ENST00000533123 C20orf166-AS1Q96NR2 134 aa9.95□□□□□ -0.82
SMPD1-208ENST00000533123 A8MUU9 505 aa9.94□□□□□ -0.82
SMPD1-208ENST00000533123 HRES1P13985 223 aa9.94□□□□□ -0.82
SMPD1-208ENST00000533123 ATP11AUNQ6ZP68 121 aa9.94□□□□□ -0.82
SMPD1-208ENST00000533123 SPTSSBQ8NFR3 76 aa9.93□□□□□ -0.82
SMPD1-208ENST00000533123 IGKV2-30P06310 120 aa9.91□□□□□ -0.82
SMPD1-208ENST00000533123 CDC42SE1Q9NRR8 79 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms