RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 H3BUX3 64 aa2.71□□□□□ -1.98
ECHDC1-221ENST00000531582 PRO2289Q9P1D8 64 aa2.71□□□□□ -1.98
ECHDC1-221ENST00000531582 DOPEY1Q5JWR5 2465 aa2.71□□□□□ -1.98
ECHDC1-221ENST00000531582 PCNX1Q96RV3 2341 aa2.71□□□□□ -1.98
ECHDC1-221ENST00000531582 ABCA12Q86UK0 2595 aa2.71□□□□□ -1.98
ECHDC1-221ENST00000531582 CUBNO60494 3623 aa2.7□□□□□ -1.98
ECHDC1-221ENST00000531582 ITPR3Q14573 2671 aa2.7□□□□□ -1.98
ECHDC1-221ENST00000531582 G3V318 75 aa2.7□□□□□ -1.98
ECHDC1-221ENST00000531582 J3QKU1 62 aa2.7□□□□□ -1.98
ECHDC1-221ENST00000531582 MAP1AP78559 2803 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-221ENST00000531582 FBN2P35556 2912 aa2.7□□□□□ -1.98
ECHDC1-221ENST00000531582 SVEP1Q4LDE5 3571 aa2.7□□□□□ -1.98
ECHDC1-221ENST00000531582 HTN1P15515 57 aa2.69□□□□□ -1.98
ECHDC1-221ENST00000531582 APCP25054 2843 aa2.69□□□□□ -1.98
ECHDC1-221ENST00000531582 OTOGQ6ZRI0 2925 aa2.69□□□□□ -1.98
ECHDC1-221ENST00000531582 SETD2Q9BYW2 2564 aaPredicted RBP2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 NOTCH3Q9UM47 2321 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 ANKHD1Q8IWZ3 2542 aaKnown RBP2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 ANKRD17O75179 2603 aaKnown RBP2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 PDZD2O15018 2839 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 H0YAA0 97 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 KRTAP13-3Q3SY46 172 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 C2CD3Q4AC94 2353 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 WNK1Q9H4A3 2382 aa2.68□□□□□ -1.98
ECHDC1-221ENST00000531582 SPRR1BP22528 89 aa2.67□□□□□ -1.98
ECHDC1-221ENST00000531582 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
ECHDC1-221ENST00000531582 PKDREJQ9NTG1 2253 aa2.66□□□□□ -1.98
ECHDC1-221ENST00000531582 ANK3Q12955 4377 aaKnown RBP2.66□□□□□ -1.98
ECHDC1-221ENST00000531582 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
ECHDC1-221ENST00000531582 LY6EQ16553 131 aa2.66□□□□□ -1.98
ECHDC1-221ENST00000531582 Q6ZSA8 131 aa2.66□□□□□ -1.98
ECHDC1-221ENST00000531582 NIPBLQ6KC79 2804 aaeCLIP2.66□□□□□ -1.98
ECHDC1-221ENST00000531582 F8P00451 2351 aa2.66□□□□□ -1.98
ECHDC1-221ENST00000531582 HIVEP1P15822 2718 aa2.65□□□□□ -1.98
ECHDC1-221ENST00000531582 HRNRQ86YZ3 2850 aaPredicted RBP2.65□□□□□ -1.98
ECHDC1-221ENST00000531582 NF1P21359 2839 aa2.64□□□□□ -1.99
ECHDC1-221ENST00000531582 CCDC168Q8NDH2 2452 aa2.64□□□□□ -1.99
ECHDC1-221ENST00000531582 MTORP42345 2549 aa2.64□□□□□ -1.99
ECHDC1-221ENST00000531582 TPRXLQ17RH7 258 aa2.64□□□□□ -1.99
ECHDC1-221ENST00000531582 H1FX-AS1Q4G0G2 97 aa2.64□□□□□ -1.99
ECHDC1-221ENST00000531582 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.63□□□□□ -1.992e-8■■■■□ 24.3
ECHDC1-221ENST00000531582 AKAP6Q13023 2319 aa2.63□□□□□ -1.99
ECHDC1-221ENST00000531582 GIG44P09565 113 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-221ENST00000531582 PLAC4Q8WY50 150 aa2.62□□□□□ -1.99
ECHDC1-221ENST00000531582 ACANP16112 2415 aa2.61□□□□□ -1.99
ECHDC1-221ENST00000531582 SPG11Q96JI7 2443 aa2.61□□□□□ -1.99
ECHDC1-221ENST00000531582 NOP10Q9NPE3 64 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-221ENST00000531582 PRO0255Q9UI72 69 aa2.61□□□□□ -1.99
ECHDC1-221ENST00000531582 CMYA5Q8N3K9 4069 aa2.61□□□□□ -1.99
ECHDC1-221ENST00000531582 ANK2Q01484 3957 aa2.61□□□□□ -1.99
ECHDC1-221ENST00000531582 ROS1P08922 2347 aa2.6□□□□□ -1.99
ECHDC1-221ENST00000531582 RPL37P61927 97 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-221ENST00000531582 ABCA2Q9BZC7 2435 aa2.59□□□□□ -1.99
ECHDC1-221ENST00000531582 INE1O15225 51 aa2.59□□□□□ -1.99
ECHDC1-221ENST00000531582 KRTAP10-5P60370 271 aa2.59□□□□□ -1.99
ECHDC1-221ENST00000531582 LELP1Q5T871 98 aa2.59□□□□□ -1.99
ECHDC1-221ENST00000531582 ZANQ9Y493 2812 aa2.58□□□□□ -2
ECHDC1-221ENST00000531582 A0A1B0GVY2 172 aa2.58□□□□□ -2
ECHDC1-221ENST00000531582 FLNAP21333 2647 aaKnown RBP2.57□□□□□ -2
ECHDC1-221ENST00000531582 LYNX1P0DP58 116 aa2.57□□□□□ -2
ECHDC1-221ENST00000531582 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
ECHDC1-221ENST00000531582 C10orf99Q6UWK7 81 aa2.57□□□□□ -2
ECHDC1-221ENST00000531582 TYMSOSQ8TAI1 123 aa2.57□□□□□ -2
ECHDC1-221ENST00000531582 DEFB130BP0DP73 79 aa2.56□□□□□ -2
ECHDC1-221ENST00000531582 DEFB130AP0DP74 79 aa2.56□□□□□ -2
ECHDC1-221ENST00000531582 R4GN34 69 aa2.56□□□□□ -2
ECHDC1-221ENST00000531582 TLN2Q9Y4G6 2542 aa2.56□□□□□ -2
ECHDC1-221ENST00000531582 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
ECHDC1-221ENST00000531582 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
ECHDC1-221ENST00000531582 JMJD1CQ15652 2540 aa2.55□□□□□ -2
ECHDC1-221ENST00000531582 NSD1Q96L73 2696 aaPredicted RBP2.54□□□□□ -2
ECHDC1-221ENST00000531582 BRD3OSQ6XYD6 125 aa2.54□□□□□ -2
ECHDC1-221ENST00000531582 Q6ZRN7 208 aaPredicted RBP2.54□□□□□ -2
ECHDC1-221ENST00000531582 SPACA4Q8TDM5 124 aa2.53□□□□□ -2
ECHDC1-221ENST00000531582 FN1P02751 2386 aaKnown RBP2.53□□□□□ -2
ECHDC1-221ENST00000531582 CSPG4Q6UVK1 2322 aa2.53□□□□□ -2
ECHDC1-221ENST00000531582 FBN3Q75N90 2809 aa2.53□□□□□ -2
ECHDC1-221ENST00000531582 COL6A5A8TX70 2615 aa2.53□□□□□ -2.01
ECHDC1-221ENST00000531582 K7EIL1 84 aa2.52□□□□□ -2.01
ECHDC1-221ENST00000531582 NBEAL1Q6ZS30 2694 aa2.52□□□□□ -2.01
ECHDC1-221ENST00000531582 SONP18583 2426 aaKnown RBP2.51□□□□□ -2.01
ECHDC1-221ENST00000531582 PRKDCP78527 4128 aaKnown RBP2.51□□□□□ -2.01
ECHDC1-221ENST00000531582 ATRQ13535 2644 aa2.51□□□□□ -2.01
ECHDC1-221ENST00000531582 MXRA5Q9NR99 2828 aa2.51□□□□□ -2.01
ECHDC1-221ENST00000531582 TENM2Q9NT68 2774 aa2.51□□□□□ -2.01
ECHDC1-221ENST00000531582 DEFB136Q30KP8 78 aa2.5□□□□□ -2.01
ECHDC1-221ENST00000531582 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
ECHDC1-221ENST00000531582 STAB1Q9NY15 2570 aa2.5□□□□□ -2.01
ECHDC1-221ENST00000531582 FLG2Q5D862 2391 aaPredicted RBP2.49□□□□□ -2.01
ECHDC1-221ENST00000531582 KRTAP10-3P60369 221 aa2.49□□□□□ -2.01
ECHDC1-221ENST00000531582 UBE2DNLQ8IWF7 75 aa2.49□□□□□ -2.01
ECHDC1-221ENST00000531582 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
ECHDC1-221ENST00000531582 H3BNG1 76 aa2.48□□□□□ -2.01
ECHDC1-221ENST00000531582 KRTAP1-4P0C5Y4 121 aa2.48□□□□□ -2.01
ECHDC1-221ENST00000531582 PRLHP81277 87 aa2.48□□□□□ -2.01
ECHDC1-221ENST00000531582 C10orf95Q9H7T3 257 aa2.48□□□□□ -2.01
ECHDC1-221ENST00000531582 KRTAP21-3Q3LHN1 58 aa2.47□□□□□ -2.01
ECHDC1-221ENST00000531582 SMR3AQ99954 134 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms