RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 POLQO75417 2590 aa1.28□□□□□ -2.2
PTPRK-220ENST00000531466 SPRR1BP22528 89 aa1.28□□□□□ -2.2
PTPRK-220ENST00000531466 KLK9Q2XQG4 91 aa1.28□□□□□ -2.2
PTPRK-220ENST00000531466 USP34Q70CQ2 3546 aa1.28□□□□□ -2.21
PTPRK-220ENST00000531466 C5orf42Q9H799 3197 aa1.27□□□□□ -2.21
PTPRK-220ENST00000531466 NBEAL1Q6ZS30 2694 aa1.27□□□□□ -2.21
PTPRK-220ENST00000531466 NCOR2Q9Y618 2525 aa1.27□□□□□ -2.21
PTPRK-220ENST00000531466 CEP250Q9BV73 2442 aa1.27□□□□□ -2.21
PTPRK-220ENST00000531466 DEFB104AQ8WTQ1 72 aa1.27□□□□□ -2.21
PTPRK-220ENST00000531466 FAM186AA6NE01 2351 aa1.27□□□□□ -2.21
PTPRK-220ENST00000531466 FBN2P35556 2912 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 CFAP46Q8IYW2 2715 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 GVINP1Q7Z2Y8 2422 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 CENPFP49454 3210 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 WDFY4Q6ZS81 3184 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 PKD1L1Q8TDX9 2849 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 MTORP42345 2549 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 CCDC168Q8NDH2 2452 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 SPG11Q96JI7 2443 aa1.26□□□□□ -2.21
PTPRK-220ENST00000531466 ASPMQ8IZT6 3477 aa1.25□□□□□ -2.21
PTPRK-220ENST00000531466 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
PTPRK-220ENST00000531466 COL6A5A8TX70 2615 aa1.25□□□□□ -2.21
PTPRK-220ENST00000531466 SPTBN2O15020 2390 aa1.25□□□□□ -2.21
PTPRK-220ENST00000531466 STAB1Q9NY15 2570 aa1.25□□□□□ -2.21
PTPRK-220ENST00000531466 IGSF10Q6WRI0 2623 aa1.24□□□□□ -2.21
PTPRK-220ENST00000531466 ZFYVE26Q68DK2 2539 aa1.24□□□□□ -2.21
PTPRK-220ENST00000531466 ITPR1Q14643 2758 aa1.24□□□□□ -2.21
PTPRK-220ENST00000531466 NBEAL2Q6ZNJ1 2754 aa1.24□□□□□ -2.21
PTPRK-220ENST00000531466 HTTP42858 3142 aa1.23□□□□□ -2.21
PTPRK-220ENST00000531466 LAMA3Q16787 3333 aa1.23□□□□□ -2.21
PTPRK-220ENST00000531466 CELSR3Q9NYQ7 3312 aa1.23□□□□□ -2.21
PTPRK-220ENST00000531466 DCHS1Q96JQ0 3298 aa1.23□□□□□ -2.21
PTPRK-220ENST00000531466 ANKHD1Q8IWZ3 2542 aaKnown RBP1.23□□□□□ -2.21
PTPRK-220ENST00000531466 IGF2RP11717 2491 aa1.23□□□□□ -2.21
PTPRK-220ENST00000531466 WDR87Q6ZQQ6 2873 aa1.22□□□□□ -2.21
PTPRK-220ENST00000531466 H3BUX3 64 aa1.22□□□□□ -2.21
PTPRK-220ENST00000531466 SPINK1P00995 79 aa1.22□□□□□ -2.21
PTPRK-220ENST00000531466 PKDREJQ9NTG1 2253 aa1.22□□□□□ -2.21
PTPRK-220ENST00000531466 PRUNE2Q8WUY3 3088 aa1.21□□□□□ -2.22
PTPRK-220ENST00000531466 TLN1Q9Y490 2541 aaKnown RBP1.21□□□□□ -2.22
PTPRK-220ENST00000531466 CACNA1HO95180 2353 aa1.2□□□□□ -2.22
PTPRK-220ENST00000531466 XIRP2A4UGR9 3374 aa1.2□□□□□ -2.22
PTPRK-220ENST00000531466 KRTAP12-1P59990 96 aa1.2□□□□□ -2.22
PTPRK-220ENST00000531466 EP300Q09472 2414 aaPredicted RBP1.2□□□□□ -2.22
PTPRK-220ENST00000531466 ROS1P08922 2347 aa1.2□□□□□ -2.22
PTPRK-220ENST00000531466 SPEGQ15772 3267 aa1.2□□□□□ -2.22
PTPRK-220ENST00000531466 TENM4Q6N022 2769 aa1.19□□□□□ -2.22
PTPRK-220ENST00000531466 DNAH14Q0VDD8 3507 aa1.19□□□□□ -2.22
PTPRK-220ENST00000531466 FRYQ5TBA9 3013 aa1.19□□□□□ -2.22
PTPRK-220ENST00000531466 WNK1Q9H4A3 2382 aa1.19□□□□□ -2.22
PTPRK-220ENST00000531466 UTP20O75691 2785 aaKnown RBP1.18□□□□□ -2.22
PTPRK-220ENST00000531466 A0A0D9SG42 100 aa1.18□□□□□ -2.22
PTPRK-220ENST00000531466 H0YGG7 62 aa1.18□□□□□ -2.22
PTPRK-220ENST00000531466 M0QZ58 72 aa1.18□□□□□ -2.22
PTPRK-220ENST00000531466 COX14Q96I36 57 aa1.18□□□□□ -2.22
PTPRK-220ENST00000531466 SMG1Q96Q15 3661 aaKnown RBP1.18□□□□□ -2.22
PTPRK-220ENST00000531466 VWFP04275 2813 aa1.18□□□□□ -2.22
PTPRK-220ENST00000531466 TLN2Q9Y4G6 2542 aa1.18□□□□□ -2.22
PTPRK-220ENST00000531466 FLNAP21333 2647 aaKnown RBP1.18□□□□□ -2.22
PTPRK-220ENST00000531466 STATHP02808 62 aa1.17□□□□□ -2.22
PTPRK-220ENST00000531466 APELAP0DMC3 54 aa1.17□□□□□ -2.22
PTPRK-220ENST00000531466 NIPBLQ6KC79 2804 aaeCLIP1.17□□□□□ -2.22
PTPRK-220ENST00000531466 NBASA2RRP1 2371 aa1.16□□□□□ -2.22
PTPRK-220ENST00000531466 CDH23Q9H251 3354 aa1.16□□□□□ -2.22
PTPRK-220ENST00000531466 RELNP78509 3460 aa1.16□□□□□ -2.22
PTPRK-220ENST00000531466 NF1P21359 2839 aa1.15□□□□□ -2.23
PTPRK-220ENST00000531466 RHPN1-AS1Q9BWJ2 59 aa1.15□□□□□ -2.23
PTPRK-220ENST00000531466 USP9YO00507 2555 aaPredicted RBP1.15□□□□□ -2.23
PTPRK-220ENST00000531466 AKAP6Q13023 2319 aa1.15□□□□□ -2.23
PTPRK-220ENST00000531466 CSPG4Q6UVK1 2322 aa1.15□□□□□ -2.23
PTPRK-220ENST00000531466 DSPP15924 2871 aaKnown RBP1.14□□□□□ -2.23
PTPRK-220ENST00000531466 NBEAQ8NFP9 2946 aa1.14□□□□□ -2.23
PTPRK-220ENST00000531466 COL12A1Q99715 3063 aa1.14□□□□□ -2.23
PTPRK-220ENST00000531466 DNHD1Q96M86 4753 aa1.14□□□□□ -2.23
PTPRK-220ENST00000531466 UBR4Q5T4S7 5183 aa1.14□□□□□ -2.23
PTPRK-220ENST00000531466 PDZD2O15018 2839 aa1.14□□□□□ -2.23
PTPRK-220ENST00000531466 ZZEF1O43149 2961 aa1.14□□□□□ -2.23
PTPRK-220ENST00000531466 F8P00451 2351 aa1.13□□□□□ -2.23
PTPRK-220ENST00000531466 MYO15AQ9UKN7 3530 aa1.13□□□□□ -2.23
PTPRK-220ENST00000531466 DMDP11532 3685 aa1.13□□□□□ -2.23
PTPRK-220ENST00000531466 SPTBN1Q01082 2364 aaKnown RBP1.13□□□□□ -2.23
PTPRK-220ENST00000531466 VPS13AQ96RL7 3174 aa1.12□□□□□ -2.23
PTPRK-220ENST00000531466 ITPR2Q14571 2701 aa1.12□□□□□ -2.23
PTPRK-220ENST00000531466 WDFY3Q8IZQ1 3526 aa1.12□□□□□ -2.23
PTPRK-220ENST00000531466 FRYLO94915 3013 aa1.12□□□□□ -2.23
PTPRK-220ENST00000531466 BOD1L1Q8NFC6 3051 aa1.12□□□□□ -2.23
PTPRK-220ENST00000531466 TRIOO75962 3097 aa1.11□□□□□ -2.23
PTPRK-220ENST00000531466 LOC400499M0QZD8 3231 aa1.11□□□□□ -2.23
PTPRK-220ENST00000531466 MGAM2Q2M2H8 2515 aa1.11□□□□□ -2.23
PTPRK-220ENST00000531466 HTN1P15515 57 aa1.11□□□□□ -2.23
PTPRK-220ENST00000531466 CRYBG3Q68DQ2 2970 aa1.11□□□□□ -2.23
PTPRK-220ENST00000531466 CSMD1Q96PZ7 3565 aa1.1□□□□□ -2.23
PTPRK-220ENST00000531466 HIVEP3Q5T1R4 2406 aa1.1□□□□□ -2.23
PTPRK-220ENST00000531466 AKAP13Q12802 2813 aa1.1□□□□□ -2.23
PTPRK-220ENST00000531466 FREM2Q5SZK8 3169 aa1.1□□□□□ -2.23
PTPRK-220ENST00000531466 CELSR1Q9NYQ6 3014 aa1.1□□□□□ -2.23
PTPRK-220ENST00000531466 DMXL1Q9Y485 3027 aa1.1□□□□□ -2.23
PTPRK-220ENST00000531466 OTOGQ6ZRI0 2925 aa1.09□□□□□ -2.23
PTPRK-220ENST00000531466 NBPF19A0A087WUL8 3843 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms