RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 LINC00472Q9H8W2 130 aa7.79□□□□□ -1.16
CHMP4A-204ENST00000530996 TMEM256-PLSCR3K7ERE1 68 aa7.78□□□□□ -1.16
CHMP4A-204ENST00000530996 A0A1B0GVX0 72 aa7.77□□□□□ -1.17
CHMP4A-204ENST00000530996 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
CHMP4A-204ENST00000530996 K7ERJ3 54 aa7.76□□□□□ -1.17
CHMP4A-204ENST00000530996 COX6CP09669 75 aa7.75□□□□□ -1.17
CHMP4A-204ENST00000530996 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
CHMP4A-204ENST00000530996 LINC00846Q9NV44 126 aa7.73□□□□□ -1.17
CHMP4A-204ENST00000530996 MACF1Q9UPN3 7388 aaKnown RBP7.72□□□□□ -1.17
CHMP4A-204ENST00000530996 SPINK7P58062 85 aa7.71□□□□□ -1.18
CHMP4A-204ENST00000530996 HSD52Q0P140 79 aa7.7□□□□□ -1.18
CHMP4A-204ENST00000530996 UBE2V1Q13404 147 aa7.7□□□□□ -1.18
CHMP4A-204ENST00000530996 LYRM7Q5U5X0 104 aa7.7□□□□□ -1.18
CHMP4A-204ENST00000530996 DSCR8Q96T75 97 aa7.69□□□□□ -1.18
CHMP4A-204ENST00000530996 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
CHMP4A-204ENST00000530996 SYNE2Q8WXH0 6885 aaKnown RBP7.67□□□□□ -1.18
CHMP4A-204ENST00000530996 J3KT08 172 aa7.67□□□□□ -1.18
CHMP4A-204ENST00000530996 RBM3P98179 157 aaKnown RBP7.67□□□□□ -1.18
CHMP4A-204ENST00000530996 A8MWP4 228 aa7.65□□□□□ -1.18
CHMP4A-204ENST00000530996 NDUFB1O75438 58 aa7.65□□□□□ -1.18
CHMP4A-204ENST00000530996 SCGB1C2P0DMR2 95 aa7.64□□□□□ -1.19
CHMP4A-204ENST00000530996 C21orf62-AS1Q17RA5 79 aa7.63□□□□□ -1.19
CHMP4A-204ENST00000530996 C9JAW5 83 aa7.61□□□□□ -1.19
CHMP4A-204ENST00000530996 KRTAP19-6Q3LI70 58 aa7.61□□□□□ -1.19
CHMP4A-204ENST00000530996 Q8N9P0 234 aaPredicted RBP7.6□□□□□ -1.19
CHMP4A-204ENST00000530996 Q6ZQT0 140 aa7.58□□□□□ -1.2
CHMP4A-204ENST00000530996 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
CHMP4A-204ENST00000530996 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
CHMP4A-204ENST00000530996 PYY3Q5JQD4 70 aa7.53□□□□□ -1.2
CHMP4A-204ENST00000530996 Q6ZVQ6 151 aa7.53□□□□□ -1.2
CHMP4A-204ENST00000530996 UQCR10Q9UDW1 63 aa7.53□□□□□ -1.2
CHMP4A-204ENST00000530996 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
CHMP4A-204ENST00000530996 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
CHMP4A-204ENST00000530996 ATXN8Q156A1 80 aa7.47□□□□□ -1.21
CHMP4A-204ENST00000530996 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
CHMP4A-204ENST00000530996 LOC110117498A0A087WWA1 95 aa7.46□□□□□ -1.22
CHMP4A-204ENST00000530996 NDUFS5O43920 106 aa7.46□□□□□ -1.22
CHMP4A-204ENST00000530996 PRR15Q8IV56 129 aa7.45□□□□□ -1.22
CHMP4A-204ENST00000530996 C14orf132Q9NPU4 83 aa7.45□□□□□ -1.22
CHMP4A-204ENST00000530996 A0A1B0GW54 56 aa7.44□□□□□ -1.22
CHMP4A-204ENST00000530996 MRPL34Q9BQ48 92 aaKnown RBP7.44□□□□□ -1.22
CHMP4A-204ENST00000530996 NREPQ16612 68 aa7.43□□□□□ -1.22
CHMP4A-204ENST00000530996 TMEM254Q8TBM7 123 aa7.43□□□□□ -1.22
CHMP4A-204ENST00000530996 NAA38Q9BRA0 125 aaKnown RBP7.43□□□□□ -1.22
CHMP4A-204ENST00000530996 IGKV2D-30A0A075B6S6 120 aa7.42□□□□□ -1.22
CHMP4A-204ENST00000530996 MMP24-AS1A0A0U1RRL7 71 aa7.42□□□□□ -1.22
CHMP4A-204ENST00000530996 IGKV2-30P06310 120 aa7.42□□□□□ -1.22
CHMP4A-204ENST00000530996 PDE6GP18545 87 aa7.42□□□□□ -1.22
CHMP4A-204ENST00000530996 KRTAP6-3Q3LI67 103 aa7.42□□□□□ -1.22
CHMP4A-204ENST00000530996 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
CHMP4A-204ENST00000530996 K7EQZ3 153 aa7.37□□□□□ -1.23
CHMP4A-204ENST00000530996 C7orf65Q6ZTY9 151 aa7.37□□□□□ -1.23
CHMP4A-204ENST00000530996 TMA7Q9Y2S6 64 aaKnown RBP7.36□□□□□ -1.23
CHMP4A-204ENST00000530996 M0R143 59 aa7.35□□□□□ -1.23
CHMP4A-204ENST00000530996 FAM236AA0A1B0GUQ0 79 aa7.31□□□□□ -1.24
CHMP4A-204ENST00000530996 FAM236BA0A1B0GV22 79 aa7.31□□□□□ -1.24
CHMP4A-204ENST00000530996 BPY2O14599 106 aa7.27□□□□□ -1.25
CHMP4A-204ENST00000530996 C4orf26Q17RF5 130 aa7.27□□□□□ -1.25
CHMP4A-204ENST00000530996 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
CHMP4A-204ENST00000530996 Q5W150 140 aa7.27□□□□□ -1.25
CHMP4A-204ENST00000530996 NEBP20929 6669 aa7.26□□□□□ -1.25
CHMP4A-204ENST00000530996 A6NN06 94 aa7.25□□□□□ -1.25
CHMP4A-204ENST00000530996 HCG22E2RYF7 251 aa7.24□□□□□ -1.25
CHMP4A-204ENST00000530996 CASC2Q6XLA1 102 aa7.24□□□□□ -1.25
CHMP4A-204ENST00000530996 Q8N9L7 120 aa7.23□□□□□ -1.25
CHMP4A-204ENST00000530996 BATFQ16520 125 aa7.21□□□□□ -1.26
CHMP4A-204ENST00000530996 TSTD3H0UI37 97 aa7.2□□□□□ -1.26
CHMP4A-204ENST00000530996 Q5VV11 94 aa7.2□□□□□ -1.26
CHMP4A-204ENST00000530996 S4R3F8 94 aa7.19□□□□□ -1.26
CHMP4A-204ENST00000530996 H3BT86 120 aa7.18□□□□□ -1.26
CHMP4A-204ENST00000530996 CXCL6P80162 114 aa7.17□□□□□ -1.26
CHMP4A-204ENST00000530996 MT1BP07438 61 aa7.14□□□□□ -1.27
CHMP4A-204ENST00000530996 CSAG1Q6PB30 78 aa7.13□□□□□ -1.27
CHMP4A-204ENST00000530996 MUC12Q9UKN1 5478 aa7.13□□□□□ -1.27
CHMP4A-204ENST00000530996 LCA10Q71F78 164 aa7.09□□□□□ -1.27
CHMP4A-204ENST00000530996 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
CHMP4A-204ENST00000530996 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
CHMP4A-204ENST00000530996 A0A1W2PPM0 123 aa7.07□□□□□ -1.28
CHMP4A-204ENST00000530996 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
CHMP4A-204ENST00000530996 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
CHMP4A-204ENST00000530996 SMIM6P0DI80 62 aa7.06□□□□□ -1.28
CHMP4A-204ENST00000530996 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
CHMP4A-204ENST00000530996 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
CHMP4A-204ENST00000530996 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
CHMP4A-204ENST00000530996 IMUPQ9GZP8 106 aa7.05□□□□□ -1.28
CHMP4A-204ENST00000530996 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
CHMP4A-204ENST00000530996 UBL5Q9BZL1 73 aa7.03□□□□□ -1.28
CHMP4A-204ENST00000530996 TAX1BP3O14907 124 aa7□□□□□ -1.29
CHMP4A-204ENST00000530996 SPCS1Q9Y6A9 102 aa6.98□□□□□ -1.29
CHMP4A-204ENST00000530996 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
CHMP4A-204ENST00000530996 KRTAP5-9P26371 169 aa6.94□□□□□ -1.3
CHMP4A-204ENST00000530996 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
CHMP4A-204ENST00000530996 KMT2DO14686 5537 aa6.93□□□□□ -1.3
CHMP4A-204ENST00000530996 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
CHMP4A-204ENST00000530996 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
CHMP4A-204ENST00000530996 A0A087WVE0 104 aa6.84□□□□□ -1.31
CHMP4A-204ENST00000530996 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
CHMP4A-204ENST00000530996 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
CHMP4A-204ENST00000530996 PRO0461Q9UI25 63 aa6.8□□□□□ -1.32
CHMP4A-204ENST00000530996 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms