RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 V9GYY9 64 aa9.26□□□□□ -0.93
USP35-206ENST00000530535 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
USP35-206ENST00000530535 TP53AIP1Q9HCN2 124 aa9.26□□□□□ -0.93
USP35-206ENST00000530535 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
USP35-206ENST00000530535 A0A1B0GVX0 72 aa9.25□□□□□ -0.93
USP35-206ENST00000530535 Q8N9P0 234 aaPredicted RBP9.25□□□□□ -0.93
USP35-206ENST00000530535 RYR2Q92736 4967 aa9.24□□□□□ -0.93
USP35-206ENST00000530535 Q5VV11 94 aa9.23□□□□□ -0.93
USP35-206ENST00000530535 ANAPC11Q9NYG5 84 aa9.23□□□□□ -0.93
USP35-206ENST00000530535 CD164Q04900 197 aa9.23□□□□□ -0.93
USP35-206ENST00000530535 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
USP35-206ENST00000530535 PKHD1P08F94 4074 aa9.22□□□□□ -0.93
USP35-206ENST00000530535 IGHV6-1A0A0B4J1U7 121 aa9.21□□□□□ -0.94
USP35-206ENST00000530535 ZNF861PO60384 105 aa9.21□□□□□ -0.94
USP35-206ENST00000530535 C1orf195Q5TG92 126 aa9.21□□□□□ -0.94
USP35-206ENST00000530535 COA5Q86WW8 74 aa9.21□□□□□ -0.94
USP35-206ENST00000530535 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
USP35-206ENST00000530535 A0A087X002 238 aa9.2□□□□□ -0.94
USP35-206ENST00000530535 NOTCH2NLQ7Z3S9 236 aa9.2□□□□□ -0.94
USP35-206ENST00000530535 KRTAP10-1P60331 282 aa9.19□□□□□ -0.94
USP35-206ENST00000530535 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
USP35-206ENST00000530535 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
USP35-206ENST00000530535 Q6ZSA8 131 aa9.16□□□□□ -0.94
USP35-206ENST00000530535 NDUFS5O43920 106 aa9.14□□□□□ -0.95
USP35-206ENST00000530535 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
USP35-206ENST00000530535 CIRBP-AS1Q8TBR5 109 aa9.14□□□□□ -0.95
USP35-206ENST00000530535 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
USP35-206ENST00000530535 A8MU10 97 aa9.14□□□□□ -0.95
USP35-206ENST00000530535 LRP1BQ9NZR2 4599 aa9.13□□□□□ -0.95
USP35-206ENST00000530535 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
USP35-206ENST00000530535 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
USP35-206ENST00000530535 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
USP35-206ENST00000530535 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
USP35-206ENST00000530535 RYR3Q15413 4870 aa9.1□□□□□ -0.95
USP35-206ENST00000530535 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
USP35-206ENST00000530535 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
USP35-206ENST00000530535 Q75L30 129 aa9.08□□□□□ -0.96
USP35-206ENST00000530535 HRES1P13985 223 aa9.07□□□□□ -0.96
USP35-206ENST00000530535 Q5W150 140 aa9.07□□□□□ -0.96
USP35-206ENST00000530535 SPINK6Q6UWN8 80 aa9.05□□□□□ -0.96
USP35-206ENST00000530535 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
USP35-206ENST00000530535 LCA10Q71F78 164 aa9.01□□□□□ -0.97
USP35-206ENST00000530535 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
USP35-206ENST00000530535 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
USP35-206ENST00000530535 PMAIP1Q13794 54 aa8.99□□□□□ -0.97
USP35-206ENST00000530535 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
USP35-206ENST00000530535 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
USP35-206ENST00000530535 C8orf87E5RJ46 101 aa8.97□□□□□ -0.97
USP35-206ENST00000530535 A6NED7 52 aa8.96□□□□□ -0.98
USP35-206ENST00000530535 FAT1Q14517 4588 aa8.92□□□□□ -0.98
USP35-206ENST00000530535 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
USP35-206ENST00000530535 CDC42SE1Q9NRR8 79 aa8.91□□□□□ -0.98
USP35-206ENST00000530535 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.99
USP35-206ENST00000530535 PRR26Q8N8Z3 221 aa8.9□□□□□ -0.99
USP35-206ENST00000530535 SMR3BP02814 79 aaPredicted RBP8.89□□□□□ -0.99
USP35-206ENST00000530535 LINC00313P59037 77 aa8.88□□□□□ -0.99
USP35-206ENST00000530535 SPINK7P58062 85 aa8.87□□□□□ -0.99
USP35-206ENST00000530535 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
USP35-206ENST00000530535 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
USP35-206ENST00000530535 KRTAP16-1A8MUX0 517 aa8.86□□□□□ -0.99
USP35-206ENST00000530535 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
USP35-206ENST00000530535 ACYP2P14621 99 aa8.85□□□□□ -0.99
USP35-206ENST00000530535 A6NN06 94 aa8.83□□□□□ -1
USP35-206ENST00000530535 IGKV2-30P06310 120 aa8.83□□□□□ -1
USP35-206ENST00000530535 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
USP35-206ENST00000530535 RETNLBQ9BQ08 111 aa8.81□□□□□ -1
USP35-206ENST00000530535 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
USP35-206ENST00000530535 KTN1-AS1Q86SY8 53 aa8.78□□□□□ -1
USP35-206ENST00000530535 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1.01
USP35-206ENST00000530535 EPPK1P58107 5090 aaKnown RBP8.76□□□□□ -1.01
USP35-206ENST00000530535 HSPG2P98160 4391 aa8.76□□□□□ -1.01
USP35-206ENST00000530535 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.01
USP35-206ENST00000530535 RYR1P21817 5038 aa8.68□□□□□ -1.02
USP35-206ENST00000530535 Q5VSD8 79 aa8.66□□□□□ -1.02
USP35-206ENST00000530535 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
USP35-206ENST00000530535 IGKV2D-30A0A075B6S6 120 aa8.66□□□□□ -1.02
USP35-206ENST00000530535 A0A1B0GU69 56 aa8.64□□□□□ -1.03
USP35-206ENST00000530535 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
USP35-206ENST00000530535 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
USP35-206ENST00000530535 SPINK1P00995 79 aa8.62□□□□□ -1.03
USP35-206ENST00000530535 C7orf65Q6ZTY9 151 aa8.62□□□□□ -1.03
USP35-206ENST00000530535 PKHD1L1Q86WI1 4243 aa8.61□□□□□ -1.03
USP35-206ENST00000530535 LRP1Q07954 4544 aaKnown RBP8.59□□□□□ -1.03
USP35-206ENST00000530535 RBM12B-AS1Q9P1G2 102 aa8.59□□□□□ -1.03
USP35-206ENST00000530535 Q8N1X5 172 aa8.58□□□□□ -1.04
USP35-206ENST00000530535 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
USP35-206ENST00000530535 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
USP35-206ENST00000530535 LINC00304Q8N9R0 145 aa8.51□□□□□ -1.05
USP35-206ENST00000530535 UQCR11O14957 56 aa8.49□□□□□ -1.05
USP35-206ENST00000530535 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
USP35-206ENST00000530535 TNXBP22105 4242 aa8.47□□□□□ -1.05
USP35-206ENST00000530535 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
USP35-206ENST00000530535 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
USP35-206ENST00000530535 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
USP35-206ENST00000530535 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
USP35-206ENST00000530535 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
USP35-206ENST00000530535 A8MUU9 505 aa8.4□□□□□ -1.06
USP35-206ENST00000530535 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
USP35-206ENST00000530535 PRAC1Q96KF2 57 aa8.4□□□□□ -1.06
USP35-206ENST00000530535 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms