RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 PKD1L2Q7Z442 2459 aa2.84□□□□□ -1.95
GMDS-207ENST00000530459 CHD8Q9HCK8 2581 aa2.84□□□□□ -1.95
GMDS-207ENST00000530459 KRTAP10-2P60368 255 aa2.84□□□□□ -1.95
GMDS-207ENST00000530459 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
GMDS-207ENST00000530459 LINC00304Q8N9R0 145 aa2.84□□□□□ -1.95
GMDS-207ENST00000530459 PSORS1C2Q9UIG4 136 aa2.84□□□□□ -1.95
GMDS-207ENST00000530459 APLNQ9ULZ1 77 aa2.84□□□□□ -1.95
GMDS-207ENST00000530459 NBEAL2Q6ZNJ1 2754 aa2.84□□□□□ -1.95
GMDS-207ENST00000530459 KRTAP15-1Q3LI76 137 aa2.83□□□□□ -1.96
GMDS-207ENST00000530459 SPINK6Q6UWN8 80 aa2.83□□□□□ -1.96
GMDS-207ENST00000530459 Q6ZSA8 131 aa2.83□□□□□ -1.96
GMDS-207ENST00000530459 ANAPC11Q9NYG5 84 aa2.83□□□□□ -1.96
GMDS-207ENST00000530459 F8P00451 2351 aa2.83□□□□□ -1.96
GMDS-207ENST00000530459 CFAP46Q8IYW2 2715 aa2.83□□□□□ -1.96
GMDS-207ENST00000530459 H0YAA0 97 aa2.82□□□□□ -1.96
GMDS-207ENST00000530459 DNAH1Q9P2D7 4330 aa2.82□□□□□ -1.96
GMDS-207ENST00000530459 CCDC168Q8NDH2 2452 aa2.82□□□□□ -1.96
GMDS-207ENST00000530459 FAM208BQ5VWN6 2430 aa2.81□□□□□ -1.96
GMDS-207ENST00000530459 PIEZO1Q92508 2521 aa2.81□□□□□ -1.96
GMDS-207ENST00000530459 KMT2BQ9UMN6 2715 aaPredicted RBP2.81□□□□□ -1.96
GMDS-207ENST00000530459 NBDYA0A0U1RRE5 68 aa2.81□□□□□ -1.96
GMDS-207ENST00000530459 UBE2DNLQ8IWF7 75 aa2.81□□□□□ -1.96
GMDS-207ENST00000530459 UNC79Q9P2D8 2635 aa2.81□□□□□ -1.96
GMDS-207ENST00000530459 CSMD2Q7Z408 3487 aa2.8□□□□□ -1.96
GMDS-207ENST00000530459 HIVEP1P15822 2718 aa2.8□□□□□ -1.96
GMDS-207ENST00000530459 FLNAP21333 2647 aaKnown RBP2.8□□□□□ -1.96
GMDS-207ENST00000530459 UBR5O95071 2799 aaPredicted RBP2.79□□□□□ -1.96
GMDS-207ENST00000530459 ABCA12Q86UK0 2595 aa2.79□□□□□ -1.96
GMDS-207ENST00000530459 A0A1B0GU33 70 aa2.79□□□□□ -1.96
GMDS-207ENST00000530459 H1FX-AS1Q4G0G2 97 aa2.79□□□□□ -1.96
GMDS-207ENST00000530459 CIRBP-AS1Q8TBR5 109 aa2.79□□□□□ -1.96
GMDS-207ENST00000530459 FLNCQ14315 2725 aa2.78□□□□□ -1.96
GMDS-207ENST00000530459 NF1P21359 2839 aa2.78□□□□□ -1.96
GMDS-207ENST00000530459 K7ERS5 55 aa2.78□□□□□ -1.96
GMDS-207ENST00000530459 P0C880 135 aa2.78□□□□□ -1.96
GMDS-207ENST00000530459 SETD2Q9BYW2 2564 aaPredicted RBP2.78□□□□□ -1.96
GMDS-207ENST00000530459 NOTCH2Q04721 2471 aa2.78□□□□□ -1.96
GMDS-207ENST00000530459 PDZD2O15018 2839 aa2.78□□□□□ -1.97
GMDS-207ENST00000530459 MTORP42345 2549 aa2.77□□□□□ -1.97
GMDS-207ENST00000530459 A0A087WTM6 91 aa2.77□□□□□ -1.97
GMDS-207ENST00000530459 IGSF10Q6WRI0 2623 aa2.77□□□□□ -1.97
GMDS-207ENST00000530459 NIPBLQ6KC79 2804 aaeCLIP2.77□□□□□ -1.97
GMDS-207ENST00000530459 CACNA1AO00555 2505 aa2.76□□□□□ -1.97
GMDS-207ENST00000530459 ZNF462Q96JM2 2506 aa2.75□□□□□ -1.97
GMDS-207ENST00000530459 ZNF469Q96JG9 3925 aaPredicted RBP2.75□□□□□ -1.97
GMDS-207ENST00000530459 J3QKU1 62 aa2.75□□□□□ -1.97
GMDS-207ENST00000530459 ACANP16112 2415 aa2.75□□□□□ -1.97
GMDS-207ENST00000530459 MYO18BQ8IUG5 2567 aa2.74□□□□□ -1.97
GMDS-207ENST00000530459 NUPR2A6NF83 97 aa2.74□□□□□ -1.97
GMDS-207ENST00000530459 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
GMDS-207ENST00000530459 OTOGQ6ZRI0 2925 aa2.73□□□□□ -1.97
GMDS-207ENST00000530459 SPINK1P00995 79 aa2.73□□□□□ -1.97
GMDS-207ENST00000530459 RPS29P62273 56 aaKnown RBP2.73□□□□□ -1.97
GMDS-207ENST00000530459 KRTAP24-1Q3LI83 254 aa2.73□□□□□ -1.97
GMDS-207ENST00000530459 TYMSOSQ8TAI1 123 aa2.73□□□□□ -1.97
GMDS-207ENST00000530459 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
GMDS-207ENST00000530459 COX6B2Q6YFQ2 88 aa2.72□□□□□ -1.97
GMDS-207ENST00000530459 KRTAP4-5Q9BYR2 181 aa2.72□□□□□ -1.97
GMDS-207ENST00000530459 TENM3Q9P273 2699 aa2.72□□□□□ -1.97
GMDS-207ENST00000530459 CUBNO60494 3623 aa2.72□□□□□ -1.97
GMDS-207ENST00000530459 VWFP04275 2813 aa2.71□□□□□ -1.98
GMDS-207ENST00000530459 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
GMDS-207ENST00000530459 RPL37P61927 97 aaKnown RBP2.69□□□□□ -1.98
GMDS-207ENST00000530459 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
GMDS-207ENST00000530459 TENM4Q6N022 2769 aa2.69□□□□□ -1.98
GMDS-207ENST00000530459 PKD1L1Q8TDX9 2849 aa2.69□□□□□ -1.98
GMDS-207ENST00000530459 KRTAP9-7A8MTY7 169 aa2.68□□□□□ -1.98
GMDS-207ENST00000530459 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
GMDS-207ENST00000530459 TEP1Q99973 2627 aaKnown RBP2.67□□□□□ -1.98
GMDS-207ENST00000530459 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
GMDS-207ENST00000530459 DNAH3Q8TD57 4116 aa2.66□□□□□ -1.98
GMDS-207ENST00000530459 CENPEQ02224 2701 aa2.66□□□□□ -1.98
GMDS-207ENST00000530459 USP24Q9UPU5 2620 aa2.66□□□□□ -1.98
GMDS-207ENST00000530459 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
GMDS-207ENST00000530459 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
GMDS-207ENST00000530459 ANK2Q01484 3957 aa2.65□□□□□ -1.98
GMDS-207ENST00000530459 HECTD1Q9ULT8 2610 aa2.65□□□□□ -1.98
GMDS-207ENST00000530459 KRTAP10-6P60371 365 aaPredicted RBP2.64□□□□□ -1.99
GMDS-207ENST00000530459 CRIPTQ9P021 101 aa2.64□□□□□ -1.99
GMDS-207ENST00000530459 HELZ2Q9BYK8 2649 aaKnown RBP2.64□□□□□ -1.99
GMDS-207ENST00000530459 BAHCC1Q9P281 2608 aa2.64□□□□□ -1.99
GMDS-207ENST00000530459 TENM1Q9UKZ4 2725 aa2.63□□□□□ -1.99
GMDS-207ENST00000530459 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
GMDS-207ENST00000530459 ATRQ13535 2644 aa2.63□□□□□ -1.99
GMDS-207ENST00000530459 NSD1Q96L73 2696 aaPredicted RBP2.63□□□□□ -1.99
GMDS-207ENST00000530459 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
GMDS-207ENST00000530459 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
GMDS-207ENST00000530459 MAST4O15021 2626 aa2.62□□□□□ -1.99
GMDS-207ENST00000530459 DNAH8Q96JB1 4490 aa2.62□□□□□ -1.99
GMDS-207ENST00000530459 DYNC2H1Q8NCM8 4307 aaKnown RBP2.61□□□□□ -1.99
GMDS-207ENST00000530459 DNAH9Q9NYC9 4486 aa2.61□□□□□ -1.99
GMDS-207ENST00000530459 DNAH10Q8IVF4 4471 aa2.6□□□□□ -1.99
GMDS-207ENST00000530459 FLNBO75369 2602 aaKnown RBP2.6□□□□□ -1.99
GMDS-207ENST00000530459 TRRAPQ9Y4A5 3859 aa2.6□□□□□ -1.99
GMDS-207ENST00000530459 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
GMDS-207ENST00000530459 KRTAP13-4Q3LI77 160 aa2.59□□□□□ -1.99
GMDS-207ENST00000530459 FASNP49327 2511 aaKnown RBP2.58□□□□□ -2
GMDS-207ENST00000530459 S4R3F8 94 aa2.58□□□□□ -2
GMDS-207ENST00000530459 LYSTQ99698 3801 aa2.57□□□□□ -2
GMDS-207ENST00000530459 DNAH17Q9UFH2 4485 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 8724.3 ms