RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 C6orf48Q9UBA6 75 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 USP9YO00507 2555 aaPredicted RBP1.55□□□□□ -2.16
CASP4-208ENST00000530309 MXRA5Q9NR99 2828 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 TLN2Q9Y4G6 2542 aa1.55□□□□□ -2.16
CASP4-208ENST00000530309 CEP295Q9C0D2 2601 aa1.54□□□□□ -2.16
CASP4-208ENST00000530309 B4DSR2 109 aa1.54□□□□□ -2.16
CASP4-208ENST00000530309 WFDC10AQ9H1F0 79 aa1.54□□□□□ -2.16
CASP4-208ENST00000530309 ZNF292O60281 2723 aa1.54□□□□□ -2.16
CASP4-208ENST00000530309 OTOGQ6ZRI0 2925 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 ATMQ13315 3056 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 H3BUX3 64 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 UTP20O75691 2785 aaKnown RBP1.53□□□□□ -2.16
CASP4-208ENST00000530309 SPRR1BP22528 89 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 APCP25054 2843 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 LRBAP50851 2863 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 C1orf137Q5JT78 98 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 CASC2Q6XLA1 102 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 USP9XQ93008 2570 aaPredicted RBP1.53□□□□□ -2.16
CASP4-208ENST00000530309 DNAH8Q96JB1 4490 aa1.53□□□□□ -2.16
CASP4-208ENST00000530309 NOP10Q9NPE3 64 aaKnown RBP1.53□□□□□ -2.16
CASP4-208ENST00000530309 EYSQ5T1H1 3165 aa1.53□□□□□ -2.17
CASP4-208ENST00000530309 CSPG4Q6UVK1 2322 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 DYNC2H1Q8NCM8 4307 aaKnown RBP1.52□□□□□ -2.17
CASP4-208ENST00000530309 COL12A1Q99715 3063 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 MMP24-AS1A0A0U1RRL7 71 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 H0Y9P7 68 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 SPAG11BQ08648 103 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 Q6ZRX8 168 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 C4orf3Q8WVX3 66 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 EPG5Q9HCE0 2579 aa1.52□□□□□ -2.17
CASP4-208ENST00000530309 ACACAQ13085 2346 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 NBEAL2Q6ZNJ1 2754 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 CFAP46Q8IYW2 2715 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 HTN1P15515 57 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 ROMO1P60602 79 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 Q96NJ1 140 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 PRO0255Q9UI72 69 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 HIVEP3Q5T1R4 2406 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 ZANQ9Y493 2812 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
CASP4-208ENST00000530309 VPS13CQ709C8 3753 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 LELP1Q5T871 98 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 SPAG11AQ6PDA7 123 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 DMAC1Q96GE9 116 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 TP53AIP1Q9HCN2 124 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 NCOR2Q9Y618 2525 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 CELSR2Q9HCU4 2923 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 TTC28Q96AY4 2481 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 DNAH10Q8IVF4 4471 aa1.5□□□□□ -2.17
CASP4-208ENST00000530309 DOPEY1Q5JWR5 2465 aa1.49□□□□□ -2.17
CASP4-208ENST00000530309 SONP18583 2426 aaKnown RBP1.49□□□□□ -2.17
CASP4-208ENST00000530309 A0A087WSZ3 146 aa1.49□□□□□ -2.17
CASP4-208ENST00000530309 CSAG1Q6PB30 78 aa1.49□□□□□ -2.17
CASP4-208ENST00000530309 DNAH2Q9P225 4427 aa1.49□□□□□ -2.17
CASP4-208ENST00000530309 DNAH11Q96DT5 4516 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 DNAH6Q9C0G6 4158 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 MUC3AQ02505 3323 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 CRYBG3Q68DQ2 2970 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 GCN1Q92616 2671 aaKnown RBP1.48□□□□□ -2.17
CASP4-208ENST00000530309 SPTBN4Q9H254 2564 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 C1orf134Q5TEV5 83 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 WFDC13Q8IUB5 93 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 VPS13DQ5THJ4 4388 aa1.48□□□□□ -2.17
CASP4-208ENST00000530309 SRRM2Q9UQ35 2752 aaKnown RBP1.47□□□□□ -2.17
CASP4-208ENST00000530309 IGF2RP11717 2491 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 UNC79Q9P2D8 2635 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 F8P00451 2351 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 H3BNG1 76 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 RPL37AP61513 92 aaKnown RBP1.47□□□□□ -2.17
CASP4-208ENST00000530309 DEFB136Q30KP8 78 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 FBN2P35556 2912 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 NAV2Q8IVL1 2488 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 ITPR3Q14573 2671 aa1.47□□□□□ -2.17
CASP4-208ENST00000530309 FLNCQ14315 2725 aa1.46□□□□□ -2.17
CASP4-208ENST00000530309 LYSTQ99698 3801 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 PTPN13Q12923 2485 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 PKD1L2Q7Z442 2459 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 TEX15Q9BXT5 2789 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 A0A096LPF7 62 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 MIR22HGQ0VDD5 57 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 MTORP42345 2549 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 VWFP04275 2813 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 SETD2Q9BYW2 2564 aaPredicted RBP1.46□□□□□ -2.18
CASP4-208ENST00000530309 CHD8Q9HCK8 2581 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 HIVEP1P15822 2718 aa1.46□□□□□ -2.18
CASP4-208ENST00000530309 POLQO75417 2590 aa1.45□□□□□ -2.18
CASP4-208ENST00000530309 UQCR11O14957 56 aa1.45□□□□□ -2.18
CASP4-208ENST00000530309 WFDC10BQ8IUB3 73 aa1.45□□□□□ -2.18
CASP4-208ENST00000530309 DEFB124Q8NES8 71 aa1.45□□□□□ -2.18
CASP4-208ENST00000530309 DEFB105AQ8NG35 78 aa1.45□□□□□ -2.18
CASP4-208ENST00000530309 SACSQ9NZJ4 4579 aa1.45□□□□□ -2.18
CASP4-208ENST00000530309 CCDC168Q8NDH2 2452 aa1.45□□□□□ -2.18
CASP4-208ENST00000530309 TEP1Q99973 2627 aaKnown RBP1.45□□□□□ -2.18
CASP4-208ENST00000530309 TENM2Q9NT68 2774 aa1.44□□□□□ -2.18
CASP4-208ENST00000530309 HUWE1Q7Z6Z7 4374 aaKnown RBP1.44□□□□□ -2.18
CASP4-208ENST00000530309 CMYA5Q8N3K9 4069 aa1.44□□□□□ -2.18
CASP4-208ENST00000530309 K7EIL1 84 aa1.44□□□□□ -2.18
CASP4-208ENST00000530309 DEFB130BP0DP73 79 aa1.44□□□□□ -2.18
CASP4-208ENST00000530309 DEFB130AP0DP74 79 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms