RNA–Protein interactions for RNA: ENST00000529006.6

KDM2A-210, Transcript of lysine demethylase 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM2A, Length 6,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-210ENST00000529006 NF1P21359 2839 aa7.17□□□□□ -1.26
KDM2A-210ENST00000529006 FASNP49327 2511 aaKnown RBP7.15□□□□□ -1.26
KDM2A-210ENST00000529006 PANO1I0J062 215 aa7.13□□□□□ -1.27
KDM2A-210ENST00000529006 FLNAP21333 2647 aaKnown RBP7.13□□□□□ -1.27
KDM2A-210ENST00000529006 A0A087X002 238 aa7.11□□□□□ -1.27
KDM2A-210ENST00000529006 A8MUU9 505 aa7.11□□□□□ -1.27
KDM2A-210ENST00000529006 CFAP46Q8IYW2 2715 aa7.09□□□□□ -1.27
KDM2A-210ENST00000529006 ITPR3Q14573 2671 aa7.08□□□□□ -1.28
KDM2A-210ENST00000529006 A8MU10 97 aa7.07□□□□□ -1.28
KDM2A-210ENST00000529006 NIPBLQ6KC79 2804 aaeCLIP7.07□□□□□ -1.284e-7■■■■■ 50.1
KDM2A-210ENST00000529006 MXRA5Q9NR99 2828 aa7.07□□□□□ -1.28
KDM2A-210ENST00000529006 APCP25054 2843 aa7.05□□□□□ -1.28
KDM2A-210ENST00000529006 KRTAP16-1A8MUX0 517 aa7.05□□□□□ -1.28
KDM2A-210ENST00000529006 USP24Q9UPU5 2620 aa7.03□□□□□ -1.28
KDM2A-210ENST00000529006 NOTCH2NLQ7Z3S9 236 aa7.02□□□□□ -1.29
KDM2A-210ENST00000529006 UNC79Q9P2D8 2635 aa7.02□□□□□ -1.29
KDM2A-210ENST00000529006 SETXQ7Z333 2677 aaKnown RBP7□□□□□ -1.29
KDM2A-210ENST00000529006 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
KDM2A-210ENST00000529006 ATRQ13535 2644 aa6.97□□□□□ -1.29
KDM2A-210ENST00000529006 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
KDM2A-210ENST00000529006 NBPF19A0A087WUL8 3843 aa6.96□□□□□ -1.3
KDM2A-210ENST00000529006 AKAP9Q99996 3911 aa6.96□□□□□ -1.3
KDM2A-210ENST00000529006 IGSF10Q6WRI0 2623 aa6.95□□□□□ -1.3
KDM2A-210ENST00000529006 HIVEP1P15822 2718 aa6.94□□□□□ -1.3
KDM2A-210ENST00000529006 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
KDM2A-210ENST00000529006 HECTD1Q9ULT8 2610 aa6.93□□□□□ -1.3
KDM2A-210ENST00000529006 TNP1P09430 55 aa6.92□□□□□ -1.3
KDM2A-210ENST00000529006 KRTAP4-16G5E9R7 235 aaPredicted RBP6.92□□□□□ -1.3
KDM2A-210ENST00000529006 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
KDM2A-210ENST00000529006 BAHCC1Q9P281 2608 aa6.91□□□□□ -1.3
KDM2A-210ENST00000529006 MGAM2Q2M2H8 2515 aa6.9□□□□□ -1.31
KDM2A-210ENST00000529006 KRTAP11-1Q8IUC1 163 aa6.89□□□□□ -1.31
KDM2A-210ENST00000529006 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
KDM2A-210ENST00000529006 UBR5O95071 2799 aaPredicted RBP6.88□□□□□ -1.31
KDM2A-210ENST00000529006 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
KDM2A-210ENST00000529006 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
KDM2A-210ENST00000529006 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
KDM2A-210ENST00000529006 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
KDM2A-210ENST00000529006 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
KDM2A-210ENST00000529006 ZNF469Q96JG9 3925 aaPredicted RBP6.8□□□□□ -1.32
KDM2A-210ENST00000529006 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
KDM2A-210ENST00000529006 A6NN06 94 aa6.78□□□□□ -1.32
KDM2A-210ENST00000529006 ITPR2Q14571 2701 aa6.75□□□□□ -1.33
KDM2A-210ENST00000529006 Q6ZRN7 208 aaPredicted RBP6.75□□□□□ -1.33
KDM2A-210ENST00000529006 PDZD2O15018 2839 aa6.75□□□□□ -1.33
KDM2A-210ENST00000529006 NOTCH1P46531 2555 aa6.73□□□□□ -1.33
KDM2A-210ENST00000529006 FLNBO75369 2602 aaKnown RBP6.72□□□□□ -1.33
KDM2A-210ENST00000529006 COL6A5A8TX70 2615 aa6.7□□□□□ -1.34
KDM2A-210ENST00000529006 MAST4O15021 2626 aa6.7□□□□□ -1.34
KDM2A-210ENST00000529006 KRTAP7-1Q8IUC3 87 aa6.69□□□□□ -1.34
KDM2A-210ENST00000529006 VWFP04275 2813 aa6.68□□□□□ -1.34
KDM2A-210ENST00000529006 PKD1L1Q8TDX9 2849 aa6.67□□□□□ -1.34
KDM2A-210ENST00000529006 NBEAL1Q6ZS30 2694 aa6.67□□□□□ -1.34
KDM2A-210ENST00000529006 CSMD3Q7Z407 3707 aa6.66□□□□□ -1.34
KDM2A-210ENST00000529006 HELZ2Q9BYK8 2649 aaKnown RBP6.65□□□□□ -1.34
KDM2A-210ENST00000529006 TRRAPQ9Y4A5 3859 aa6.65□□□□□ -1.34
KDM2A-210ENST00000529006 NSD1Q96L73 2696 aaPredicted RBP6.64□□□□□ -1.35
KDM2A-210ENST00000529006 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
KDM2A-210ENST00000529006 STAB1Q9NY15 2570 aa6.61□□□□□ -1.35
KDM2A-210ENST00000529006 KRTAP13-1Q8IUC0 172 aa6.61□□□□□ -1.35
KDM2A-210ENST00000529006 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
KDM2A-210ENST00000529006 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
KDM2A-210ENST00000529006 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
KDM2A-210ENST00000529006 XP32Q5T750 250 aa6.54□□□□□ -1.36
KDM2A-210ENST00000529006 FBN1P35555 2871 aaKnown RBP6.54□□□□□ -1.36
KDM2A-210ENST00000529006 P0C880 135 aa6.53□□□□□ -1.36
KDM2A-210ENST00000529006 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
KDM2A-210ENST00000529006 TENM3Q9P273 2699 aa6.49□□□□□ -1.37
KDM2A-210ENST00000529006 SRRM2Q9UQ35 2752 aaKnown RBP6.47□□□□□ -1.37
KDM2A-210ENST00000529006 OTOGQ6ZRI0 2925 aa6.44□□□□□ -1.38
KDM2A-210ENST00000529006 TENM4Q6N022 2769 aa6.41□□□□□ -1.38
KDM2A-210ENST00000529006 H0YAA0 97 aa6.38□□□□□ -1.39
KDM2A-210ENST00000529006 ANK3Q12955 4377 aaKnown RBP6.36□□□□□ -1.39
KDM2A-210ENST00000529006 KRTAP21-3Q3LHN1 58 aa6.36□□□□□ -1.39
KDM2A-210ENST00000529006 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
KDM2A-210ENST00000529006 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
KDM2A-210ENST00000529006 KRTAP1-4P0C5Y4 121 aa6.34□□□□□ -1.39
KDM2A-210ENST00000529006 STAB2Q8WWQ8 2551 aa6.34□□□□□ -1.39
KDM2A-210ENST00000529006 TENM2Q9NT68 2774 aa6.3□□□□□ -1.4
KDM2A-210ENST00000529006 KMT2BQ9UMN6 2715 aaPredicted RBP6.29□□□□□ -1.4
KDM2A-210ENST00000529006 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
KDM2A-210ENST00000529006 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
KDM2A-210ENST00000529006 LYSTQ99698 3801 aa6.12□□□□□ -1.43
KDM2A-210ENST00000529006 DNAH10Q8IVF4 4471 aa6.12□□□□□ -1.43
KDM2A-210ENST00000529006 ANK2Q01484 3957 aa6.11□□□□□ -1.43
KDM2A-210ENST00000529006 TGP01266 2768 aa6.1□□□□□ -1.43
KDM2A-210ENST00000529006 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
KDM2A-210ENST00000529006 FBN3Q75N90 2809 aa5.99□□□□□ -1.45
KDM2A-210ENST00000529006 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
KDM2A-210ENST00000529006 FRAS1Q86XX4 4008 aa5.95□□□□□ -1.46
KDM2A-210ENST00000529006 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
KDM2A-210ENST00000529006 HUWE1Q7Z6Z7 4374 aaKnown RBP5.91□□□□□ -1.46
KDM2A-210ENST00000529006 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
KDM2A-210ENST00000529006 CMYA5Q8N3K9 4069 aa5.84□□□□□ -1.47
KDM2A-210ENST00000529006 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
KDM2A-210ENST00000529006 DNAH9Q9NYC9 4486 aa5.83□□□□□ -1.48
KDM2A-210ENST00000529006 DNAH7Q8WXX0 4024 aa5.82□□□□□ -1.48
KDM2A-210ENST00000529006 KMT2AQ03164 3969 aa5.7□□□□□ -1.5
KDM2A-210ENST00000529006 PLECQ15149 4684 aaKnown RBP5.66□□□□□ -1.5
KDM2A-210ENST00000529006 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms