RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 SPANXA2-OT1Q8N9U9 137 aa2.99□□□□□ -1.93
CD44-230ENST00000528922 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
CD44-230ENST00000528922 COL7A1Q02388 2944 aa2.99□□□□□ -1.93
CD44-230ENST00000528922 CMYA5Q8N3K9 4069 aa2.99□□□□□ -1.93
CD44-230ENST00000528922 M0R2N4 97 aa2.98□□□□□ -1.93
CD44-230ENST00000528922 PSCAO43653 123 aa2.98□□□□□ -1.93
CD44-230ENST00000528922 CNBPP62633 177 aaKnown RBP2.98□□□□□ -1.93
CD44-230ENST00000528922 C1orf195Q5TG92 126 aa2.98□□□□□ -1.93
CD44-230ENST00000528922 Q8N9L7 120 aa2.98□□□□□ -1.93
CD44-230ENST00000528922 B9D2Q9BPU9 175 aa2.98□□□□□ -1.93
CD44-230ENST00000528922 TP53AIP1Q9HCN2 124 aa2.98□□□□□ -1.93
CD44-230ENST00000528922 DNAH1Q9P2D7 4330 aa2.98□□□□□ -1.93
CD44-230ENST00000528922 A0A1W2PNM2 257 aa2.97□□□□□ -1.93
CD44-230ENST00000528922 SPRR1BP22528 89 aa2.97□□□□□ -1.93
CD44-230ENST00000528922 Q1T7F1 81 aa2.97□□□□□ -1.93
CD44-230ENST00000528922 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
CD44-230ENST00000528922 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.96□□□□□ -1.93
CD44-230ENST00000528922 OXTP01178 125 aa2.96□□□□□ -1.93
CD44-230ENST00000528922 UBE2AP49459 152 aa2.96□□□□□ -1.93
CD44-230ENST00000528922 Q9BRP9 147 aa2.96□□□□□ -1.93
CD44-230ENST00000528922 LIMD2Q9BT23 127 aa2.96□□□□□ -1.93
CD44-230ENST00000528922 LINC00588Q9Y4M8 146 aa2.96□□□□□ -1.93
CD44-230ENST00000528922 ZNF706Q9Y5V0 76 aaPredicted RBP2.96□□□□□ -1.93
CD44-230ENST00000528922 UBE2DNLQ8IWF7 75 aa2.95□□□□□ -1.94
CD44-230ENST00000528922 ZCCHC13Q8WW36 166 aaKnown RBP2.95□□□□□ -1.94
CD44-230ENST00000528922 HIGD2AQ9BW72 106 aa2.95□□□□□ -1.94
CD44-230ENST00000528922 A8MWP4 228 aa2.94□□□□□ -1.94
CD44-230ENST00000528922 FP248Q71RG6 208 aaPredicted RBP2.94□□□□□ -1.94
CD44-230ENST00000528922 BRK1Q8WUW1 75 aa2.94□□□□□ -1.94
CD44-230ENST00000528922 TRAV22A0A0B4J277 110 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 K7EQZ3 153 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 CHTF8P0CG12 524 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 MOBPQ13875 183 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 IGFL1Q6UW32 110 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 CASC2Q6XLA1 102 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 LINC00336Q6ZUF6 198 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 PRR15Q8IV56 129 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 A0A087WSZ3 146 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 KRTAP10-8P60410 259 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 C1orf64Q8NEQ6 169 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 RETNQ9HD89 108 aa2.93□□□□□ -1.94
CD44-230ENST00000528922 H0Y9P7 68 aa2.92□□□□□ -1.94
CD44-230ENST00000528922 C9orf163Q8N9P6 203 aa2.92□□□□□ -1.94
CD44-230ENST00000528922 ST20-AS1Q8NBB2 130 aa2.92□□□□□ -1.94
CD44-230ENST00000528922 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
CD44-230ENST00000528922 STAB2Q8WWQ8 2551 aa2.91□□□□□ -1.94
CD44-230ENST00000528922 NUPR2A6NF83 97 aa2.91□□□□□ -1.94
CD44-230ENST00000528922 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.95
CD44-230ENST00000528922 A0A096LNI7 61 aa2.9□□□□□ -1.95
CD44-230ENST00000528922 IGKV2-24A0A0C4DH68 120 aa2.9□□□□□ -1.95
CD44-230ENST00000528922 WFDC13Q8IUB5 93 aa2.9□□□□□ -1.95
CD44-230ENST00000528922 LINC00472Q9H8W2 130 aa2.9□□□□□ -1.95
CD44-230ENST00000528922 LYSTQ99698 3801 aa2.89□□□□□ -1.95
CD44-230ENST00000528922 KIAA1109Q2LD37 5005 aa2.88□□□□□ -1.95
CD44-230ENST00000528922 LOC101927531A0A1B0GV80 90 aa2.88□□□□□ -1.95
CD44-230ENST00000528922 PRLHP81277 87 aa2.88□□□□□ -1.95
CD44-230ENST00000528922 CD164Q04900 197 aa2.88□□□□□ -1.95
CD44-230ENST00000528922 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
CD44-230ENST00000528922 CSMD3Q7Z407 3707 aa2.88□□□□□ -1.95
CD44-230ENST00000528922 HERC1Q15751 4861 aa2.87□□□□□ -1.95
CD44-230ENST00000528922 NBDYA0A0U1RRE5 68 aa2.87□□□□□ -1.95
CD44-230ENST00000528922 C8orf87E5RJ46 101 aa2.87□□□□□ -1.95
CD44-230ENST00000528922 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
CD44-230ENST00000528922 LINC00483Q53H64 154 aa2.87□□□□□ -1.95
CD44-230ENST00000528922 APLNQ9ULZ1 77 aa2.87□□□□□ -1.95
CD44-230ENST00000528922 HECTD4Q9Y4D8 3996 aa2.86□□□□□ -1.95
CD44-230ENST00000528922 A0A1W2PNN7 141 aa2.86□□□□□ -1.95
CD44-230ENST00000528922 K7EIL1 84 aa2.86□□□□□ -1.95
CD44-230ENST00000528922 NDUFS5O43920 106 aa2.86□□□□□ -1.95
CD44-230ENST00000528922 ATP11AUNQ6ZP68 121 aa2.86□□□□□ -1.95
CD44-230ENST00000528922 FRAS1Q86XX4 4008 aa2.86□□□□□ -1.95
CD44-230ENST00000528922 DNAH9Q9NYC9 4486 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 MMP24-AS1A0A0U1RRL7 71 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 ASB16-AS1Q495Z4 193 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 FAM229BQ4G0N7 80 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 PHF5AQ7RTV0 110 aaKnown RBP2.85□□□□□ -1.95
CD44-230ENST00000528922 SSBP3-AS1Q7Z2R9 100 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 MRPL34Q9BQ48 92 aaKnown RBP2.85□□□□□ -1.95
CD44-230ENST00000528922 PRR15LQ9BU68 103 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 C8orf17Q9NRJ1 99 aa2.85□□□□□ -1.95
CD44-230ENST00000528922 CHKB-CPT1BH3BT56 60 aa2.84□□□□□ -1.96
CD44-230ENST00000528922 KRTAP13-1Q8IUC0 172 aa2.84□□□□□ -1.96
CD44-230ENST00000528922 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.96
CD44-230ENST00000528922 LRCOL1A6NCL2 159 aa2.83□□□□□ -1.96
CD44-230ENST00000528922 PSPHP1O15172 72 aa2.83□□□□□ -1.96
CD44-230ENST00000528922 ACYP2P14621 99 aa2.83□□□□□ -1.96
CD44-230ENST00000528922 COA5Q86WW8 74 aa2.83□□□□□ -1.96
CD44-230ENST00000528922 SPACA4Q8TDM5 124 aa2.83□□□□□ -1.96
CD44-230ENST00000528922 DEFB116Q30KQ4 102 aa2.82□□□□□ -1.96
CD44-230ENST00000528922 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
CD44-230ENST00000528922 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
CD44-230ENST00000528922 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
CD44-230ENST00000528922 A6NED7 52 aa2.81□□□□□ -1.96
CD44-230ENST00000528922 A8MUN3 132 aa2.81□□□□□ -1.96
CD44-230ENST00000528922 Q5VV11 94 aa2.81□□□□□ -1.96
CD44-230ENST00000528922 PLAC8Q9NZF1 115 aa2.81□□□□□ -1.96
CD44-230ENST00000528922 IGHV6-1A0A0B4J1U7 121 aa2.8□□□□□ -1.96
CD44-230ENST00000528922 SEC61GP60059 68 aa2.8□□□□□ -1.96
CD44-230ENST00000528922 A0A087WTM6 91 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms