RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-219ENST00000527498 IGKV3-7A0A075B6H7 116 aa2.37□□□□□ -2.03
PUM1-219ENST00000527498 A8MU10 97 aa2.37□□□□□ -2.03
PUM1-219ENST00000527498 HTN3P15516 51 aa2.37□□□□□ -2.03
PUM1-219ENST00000527498 POLR2KP53803 58 aaKnown RBP2.37□□□□□ -2.03
PUM1-219ENST00000527498 CMC4P56277 68 aaPredicted RBP2.37□□□□□ -2.03
PUM1-219ENST00000527498 KRTAP1-5Q9BYS1 174 aa2.37□□□□□ -2.03
PUM1-219ENST00000527498 TNXBP22105 4242 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 DNAH8Q96JB1 4490 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 IGLV10-54A0A075B6I4 117 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.36□□□□□ -2.03
PUM1-219ENST00000527498 IGKV1D-37A0A075B6S9 117 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 ETDCA0A1B0GVM5 59 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 DEFB131AP59861 70 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 C10orf55Q5SWW7 151 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 LINC00612Q8N6U2 182 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 DEFB104AQ8WTQ1 72 aa2.36□□□□□ -2.03
PUM1-219ENST00000527498 LECT2O14960 151 aa2.35□□□□□ -2.03
PUM1-219ENST00000527498 GAS8-AS1O95177 125 aa2.35□□□□□ -2.03
PUM1-219ENST00000527498 SPART-AS1P0CW21 52 aa2.35□□□□□ -2.03
PUM1-219ENST00000527498 DEFB116Q30KQ4 102 aa2.35□□□□□ -2.03
PUM1-219ENST00000527498 TRGV2A0A075B6R0 118 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 A0A1W2PNM2 257 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 IGKV2-29A2NJV5 120 aaPredicted RBP2.34□□□□□ -2.03
PUM1-219ENST00000527498 H0Y9P7 68 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 NDUFA4O00483 81 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 ZNF861PO60384 105 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 IGHV3-53P01767 116 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 CCL18P55774 89 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 DSCR10P59022 87 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.03
PUM1-219ENST00000527498 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
PUM1-219ENST00000527498 SMIM11BQ8TCY0 68 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 RHPN1-AS1Q9BWJ2 59 aa2.34□□□□□ -2.03
PUM1-219ENST00000527498 H3BRN7 92 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 DNAH10OSP0CZ25 163 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 LINC00315P59091 139 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 KLK9Q2XQG4 91 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 C1orf137Q5JT78 98 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 CSAG1Q6PB30 78 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 SPATA8Q6RVD6 105 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 KCNQ1DNQ9H478 68 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
PUM1-219ENST00000527498 A0A087WTM6 91 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 TRGV4A0A0C4DH28 118 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 UQCR11O14957 56 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 IGKV4-1P06312 121 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 MGPP08493 103 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 Q6ZTI0 123 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 TMEM167AQ8TBQ9 72 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 CIRBP-AS1Q8TBR5 109 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 DMAC1Q96GE9 116 aa2.32□□□□□ -2.04
PUM1-219ENST00000527498 IGHV3-64A0A075B6Q5 118 aa2.3□□□□□ -2.04
PUM1-219ENST00000527498 A8MWP4 228 aa2.3□□□□□ -2.04
PUM1-219ENST00000527498 MT1HL1P0DM35 61 aa2.3□□□□□ -2.04
PUM1-219ENST00000527498 COX7BP24311 80 aa2.3□□□□□ -2.04
PUM1-219ENST00000527498 KRTAP10-4P60372 401 aaPredicted RBP2.3□□□□□ -2.04
PUM1-219ENST00000527498 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
PUM1-219ENST00000527498 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
PUM1-219ENST00000527498 COA5Q86WW8 74 aa2.3□□□□□ -2.04
PUM1-219ENST00000527498 RPL39LQ96EH5 51 aaKnown RBP2.3□□□□□ -2.04
PUM1-219ENST00000527498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.29□□□□□ -2.04
PUM1-219ENST00000527498 TRBV6-4A0A1B0GX49 114 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 K7EIM0 57 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 IGKV1-17P01599 117 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 DEFB130BP0DP73 79 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 DEFB130AP0DP74 79 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 SPINK7P58062 85 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 RPL39P62891 51 aaKnown RBP2.29□□□□□ -2.04
PUM1-219ENST00000527498 LELP1Q5T871 98 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 Q5W150 140 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 C20orf166-AS1Q96NR2 134 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 SPRR4Q96PI1 79 aa2.29□□□□□ -2.04
PUM1-219ENST00000527498 MUC2Q02817 5179 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 IGLV4-60A0A075B6I1 120 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 IGKV2-28A0A075B6P5 120 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 IGKV2-40A0A087WW87 121 aaPredicted RBP2.28□□□□□ -2.04
PUM1-219ENST00000527498 IGKV2D-40P01614 121 aaPredicted RBP2.28□□□□□ -2.04
PUM1-219ENST00000527498 IGKV2D-28P01615 120 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 LINC00158P58513 81 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 DEFB1P60022 68 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 WT1-ASQ06250 92 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 LINC00575Q6W349 94 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 Q8TAT8 98 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 PRR34Q9NV39 138 aa2.28□□□□□ -2.04
PUM1-219ENST00000527498 PANO1I0J062 215 aa2.27□□□□□ -2.05
PUM1-219ENST00000527498 LPAP08519 4548 aa2.27□□□□□ -2.05
PUM1-219ENST00000527498 I3L2K1 104 aa2.26□□□□□ -2.05
PUM1-219ENST00000527498 M0QY20 66 aa2.26□□□□□ -2.05
PUM1-219ENST00000527498 P0C880 135 aa2.26□□□□□ -2.05
PUM1-219ENST00000527498 RNASE3P12724 160 aaKnown RBP2.26□□□□□ -2.05
PUM1-219ENST00000527498 KRTAP26-1Q6PEX3 210 aa2.26□□□□□ -2.05
PUM1-219ENST00000527498 Q6ZSA8 131 aa2.26□□□□□ -2.05
PUM1-219ENST00000527498 C9orf163Q8N9P6 203 aa2.26□□□□□ -2.05
PUM1-219ENST00000527498 CDKN2A-AS1Q9UH64 79 aa2.26□□□□□ -2.05
PUM1-219ENST00000527498 LINC00959A0A1B0GUT2 108 aa2.25□□□□□ -2.05
PUM1-219ENST00000527498 IGLV7-43P04211 117 aa2.25□□□□□ -2.05
PUM1-219ENST00000527498 A0A096LPF7 62 aa2.24□□□□□ -2.05
PUM1-219ENST00000527498 RPL37AP61513 92 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms