RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
CAPN1-206ENST00000526966 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-206ENST00000526966 ORMDL1Q9P0S3 153 aa9.81□□□□□ -0.84
CAPN1-206ENST00000526966 JMJD7-PLA2G4BH0Y9G9 81 aa9.79□□□□□ -0.84
CAPN1-206ENST00000526966 Q6ZQY7 126 aa9.79□□□□□ -0.84
CAPN1-206ENST00000526966 TMEM256-PLSCR3K7ERE1 68 aa9.77□□□□□ -0.85
CAPN1-206ENST00000526966 GHRHP01286 108 aa9.75□□□□□ -0.85
CAPN1-206ENST00000526966 F8WEM9 126 aa9.72□□□□□ -0.85
CAPN1-206ENST00000526966 Q75L30 129 aa9.72□□□□□ -0.85
CAPN1-206ENST00000526966 USH2AO75445 5202 aa9.71□□□□□ -0.86
CAPN1-206ENST00000526966 SSPOA2VEC9 5147 aa9.71□□□□□ -0.86
CAPN1-206ENST00000526966 ATP5EP2Q5VTU8 51 aa9.7□□□□□ -0.86
CAPN1-206ENST00000526966 Q6JHZ5 121 aa9.7□□□□□ -0.86
CAPN1-206ENST00000526966 ATP11AUNQ6ZP68 121 aa9.7□□□□□ -0.86
CAPN1-206ENST00000526966 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.69□□□□□ -0.86
CAPN1-206ENST00000526966 CCKP06307 115 aa9.69□□□□□ -0.86
CAPN1-206ENST00000526966 KRTAP9-7A8MTY7 169 aa9.68□□□□□ -0.86
CAPN1-206ENST00000526966 PDE6GP18545 87 aa9.67□□□□□ -0.86
CAPN1-206ENST00000526966 IGFL1Q6UW32 110 aa9.67□□□□□ -0.86
CAPN1-206ENST00000526966 C14orf132Q9NPU4 83 aa9.66□□□□□ -0.86
CAPN1-206ENST00000526966 KRTAP9-8Q9BYQ0 159 aa9.65□□□□□ -0.86
CAPN1-206ENST00000526966 LOC110117498A0A087WWA1 95 aa9.63□□□□□ -0.87
CAPN1-206ENST00000526966 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
CAPN1-206ENST00000526966 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
CAPN1-206ENST00000526966 ATOX1O00244 68 aa9.61□□□□□ -0.87
CAPN1-206ENST00000526966 HIST1H4AP62805 103 aaKnown RBP9.61□□□□□ -0.87
CAPN1-206ENST00000526966 LINC00846Q9NV44 126 aa9.59□□□□□ -0.87
CAPN1-206ENST00000526966 RBM3P98179 157 aaKnown RBP9.58□□□□□ -0.88
CAPN1-206ENST00000526966 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
CAPN1-206ENST00000526966 UBL5Q9BZL1 73 aa9.57□□□□□ -0.88
CAPN1-206ENST00000526966 UQCRQO14949 82 aa9.56□□□□□ -0.88
CAPN1-206ENST00000526966 Q96NJ1 140 aa9.56□□□□□ -0.88
CAPN1-206ENST00000526966 CCDC179H3BU77 68 aa9.54□□□□□ -0.88
CAPN1-206ENST00000526966 Q6ZQT0 140 aa9.54□□□□□ -0.88
CAPN1-206ENST00000526966 DSCR8Q96T75 97 aa9.54□□□□□ -0.88
CAPN1-206ENST00000526966 FCGBPQ9Y6R7 5405 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-206ENST00000526966 A8MUU9 505 aa9.53□□□□□ -0.88
CAPN1-206ENST00000526966 COX7CP15954 63 aa9.51□□□□□ -0.89
CAPN1-206ENST00000526966 SS18L2Q9UHA2 77 aa9.49□□□□□ -0.89
CAPN1-206ENST00000526966 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
CAPN1-206ENST00000526966 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
CAPN1-206ENST00000526966 A0A1B0GW54 56 aa9.46□□□□□ -0.9
CAPN1-206ENST00000526966 MT2AP02795 61 aa9.46□□□□□ -0.9
CAPN1-206ENST00000526966 CXCL6P80162 114 aa9.46□□□□□ -0.9
CAPN1-206ENST00000526966 SERP2Q8N6R1 65 aa9.46□□□□□ -0.9
CAPN1-206ENST00000526966 SMIM20Q8N5G0 67 aa9.44□□□□□ -0.9
CAPN1-206ENST00000526966 A0A1W2PNM2 257 aa9.42□□□□□ -0.9
CAPN1-206ENST00000526966 LCE2BO14633 110 aa9.4□□□□□ -0.9
CAPN1-206ENST00000526966 MT1FP04733 61 aa9.39□□□□□ -0.91
CAPN1-206ENST00000526966 Q6ZVQ6 151 aa9.39□□□□□ -0.91
CAPN1-206ENST00000526966 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
CAPN1-206ENST00000526966 A0A087WSZ3 146 aa9.38□□□□□ -0.91
CAPN1-206ENST00000526966 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
CAPN1-206ENST00000526966 DSCR10P59022 87 aa9.37□□□□□ -0.91
CAPN1-206ENST00000526966 KRTAP9-3Q9BYQ3 159 aa9.36□□□□□ -0.91
CAPN1-206ENST00000526966 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
CAPN1-206ENST00000526966 A0A087WVE0 104 aa9.34□□□□□ -0.91
CAPN1-206ENST00000526966 FAM236DA0A1B0GTK5 79 aa9.34□□□□□ -0.91
CAPN1-206ENST00000526966 FAM236CP0DP71 79 aa9.34□□□□□ -0.91
CAPN1-206ENST00000526966 TMEM258P61165 79 aa9.33□□□□□ -0.92
CAPN1-206ENST00000526966 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
CAPN1-206ENST00000526966 HRES1P13985 223 aa9.31□□□□□ -0.92
CAPN1-206ENST00000526966 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
CAPN1-206ENST00000526966 LINC00313P59037 77 aa9.28□□□□□ -0.92
CAPN1-206ENST00000526966 KRTAP10-10P60014 251 aa9.28□□□□□ -0.92
CAPN1-206ENST00000526966 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
CAPN1-206ENST00000526966 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
CAPN1-206ENST00000526966 NREPQ16612 68 aa9.25□□□□□ -0.93
CAPN1-206ENST00000526966 SYNE2Q8WXH0 6885 aaKnown RBP9.24□□□□□ -0.93
CAPN1-206ENST00000526966 J3KT08 172 aa9.23□□□□□ -0.93
CAPN1-206ENST00000526966 NOTCH2NLQ7Z3S9 236 aa9.23□□□□□ -0.93
CAPN1-206ENST00000526966 IGKV4-1P06312 121 aa9.22□□□□□ -0.93
CAPN1-206ENST00000526966 LINC00472Q9H8W2 130 aa9.21□□□□□ -0.94
CAPN1-206ENST00000526966 BPY2O14599 106 aa9.19□□□□□ -0.94
CAPN1-206ENST00000526966 NDUFC1O43677 76 aa9.19□□□□□ -0.94
CAPN1-206ENST00000526966 KLKP1Q107X0 134 aa9.19□□□□□ -0.94
CAPN1-206ENST00000526966 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
CAPN1-206ENST00000526966 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
CAPN1-206ENST00000526966 DEFB116Q30KQ4 102 aa9.13□□□□□ -0.95
CAPN1-206ENST00000526966 C20orf197Q8N268 126 aa9.13□□□□□ -0.95
CAPN1-206ENST00000526966 IGHV6-1A0A0B4J1U7 121 aa9.12□□□□□ -0.95
CAPN1-206ENST00000526966 SVIPQ8NHG7 77 aa9.09□□□□□ -0.95
CAPN1-206ENST00000526966 CYSTM1Q9H1C7 97 aa9.09□□□□□ -0.95
CAPN1-206ENST00000526966 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
CAPN1-206ENST00000526966 H7BZZ5 65 aa9.06□□□□□ -0.96
CAPN1-206ENST00000526966 OCR1Q9BZK8 76 aa9.06□□□□□ -0.96
CAPN1-206ENST00000526966 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
CAPN1-206ENST00000526966 ZCCHC13Q8WW36 166 aaKnown RBP9.05□□□□□ -0.96
CAPN1-206ENST00000526966 SPINK7P58062 85 aa9.03□□□□□ -0.96
CAPN1-206ENST00000526966 TMEM254Q8TBM7 123 aa9.03□□□□□ -0.96
CAPN1-206ENST00000526966 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
CAPN1-206ENST00000526966 A8MWP4 228 aa9.02□□□□□ -0.97
CAPN1-206ENST00000526966 NDUFB1O75438 58 aa9.01□□□□□ -0.97
CAPN1-206ENST00000526966 Q8N9L7 120 aa8.98□□□□□ -0.97
CAPN1-206ENST00000526966 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
CAPN1-206ENST00000526966 HCG22E2RYF7 251 aa8.94□□□□□ -0.98
CAPN1-206ENST00000526966 KRTAP6-3Q3LI67 103 aa8.94□□□□□ -0.98
CAPN1-206ENST00000526966 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
CAPN1-206ENST00000526966 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
CAPN1-206ENST00000526966 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms