RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
KNL1-203ENST00000526913 FAM223BA6NKX1 122 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 G3V318 75 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 KRTAP21-2Q3LI59 83 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 BET1LQ9NYM9 111 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 CSPG4Q6UVK1 2322 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 ATOX1O00244 68 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 HMGN3Q15651 99 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 V9GYH0 126 aa0.43□□□□□ -2.34
KNL1-203ENST00000526913 H3BUA1 57 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 SPINK4O60575 86 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 PSMG4Q5JS54 123 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 RHPN1-AS1Q9BWJ2 59 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 CDC42SE2Q9NRR3 84 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 ARL2-SNX15V9GYD0 113 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 TRBV7-1A0A0A6YYK4 115 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 APOC3P02656 99 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 SPINT3P49223 89 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 SMIM11AP58511 58 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 USMG5Q96IX5 58 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 H7BZZ5 65 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 CAV3P56539 151 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 ALKAL2Q6UX46 152 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 WFDC9Q8NEX5 89 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 TMEM167AQ8TBQ9 72 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 WFDC6Q9BQY6 131 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 VAMP8Q9BV40 100 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 PROK2Q9HC23 129 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 LENEPQ9Y5L5 61 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 SFTA3P0C7M3 94 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 FAUP35544 74 aaKnown RBP0.42□□□□□ -2.34
KNL1-203ENST00000526913 S100A13Q99584 98 aa0.42□□□□□ -2.34
KNL1-203ENST00000526913 COX6CP09669 75 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 SPAG11BQ08648 103 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 DEFB110Q30KQ9 67 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 FAM167A-AS1Q96KT0 104 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 ABRACLQ9P1F3 81 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 LINC01556Q5JQF7 62 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 LINC01600Q96MT4 127 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 UQCR10Q9UDW1 63 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 CACFD1Q9UGQ2 172 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 HILPDAQ9Y5L2 63 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 PRCDQ00LT1 54 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 DEFA5Q01523 94 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 V9GYV3 84 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 IGLC7A0M8Q6 106 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 RPS29P62273 56 aaKnown RBP0.41□□□□□ -2.34
KNL1-203ENST00000526913 SPINK13Q1W4C9 94 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 SMIM4Q8WVI0 70 aa0.41□□□□□ -2.34
KNL1-203ENST00000526913 DEFB130BP0DP73 79 aa0.4□□□□□ -2.34
KNL1-203ENST00000526913 DEFB130AP0DP74 79 aa0.4□□□□□ -2.34
KNL1-203ENST00000526913 LINC00575Q6W349 94 aa0.4□□□□□ -2.34
KNL1-203ENST00000526913 TRBV7-7A0A0K0K1E9 115 aa0.4□□□□□ -2.34
KNL1-203ENST00000526913 TRGV9Q99603 122 aa0.4□□□□□ -2.34
KNL1-203ENST00000526913 PRO1854Q9UHT4 67 aa0.4□□□□□ -2.34
KNL1-203ENST00000526913 USF3Q68DE3 2245 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 A0A087WVE0 104 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 GVQW2A0A096LPI5 108 aaPredicted RBP0.4□□□□□ -2.35
KNL1-203ENST00000526913 F2Z2F3 143 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 SFT2D2O95562 160 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 ACYP1P07311 99 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 ACYP2P14621 99 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 KLKP1Q107X0 134 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 SERP2Q8N6R1 65 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 DEFB108BQ8NET1 73 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 PRR15LQ9BU68 103 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 CRIPTQ9P021 101 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 U3KQA8 63 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 COX17Q14061 63 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 C10orf99Q6UWK7 81 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 PSENENQ9NZ42 101 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 R4GMQ9 66 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 A0A0D9SG42 100 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 IQCF6A8MYZ5 107 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 RPL37P61927 97 aaKnown RBP0.4□□□□□ -2.35
KNL1-203ENST00000526913 PMCHL1Q16048 86 aa0.4□□□□□ -2.35
KNL1-203ENST00000526913 SAA2P0DJI9 122 aaPredicted RBP0.39□□□□□ -2.35
KNL1-203ENST00000526913 BAGE3Q86Y29 109 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 A0A087WWC5 75 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 SPINK7P58062 85 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 SNRPFP62306 86 aaKnown RBP0.39□□□□□ -2.35
KNL1-203ENST00000526913 ZNF720Q7Z2F6 126 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 KRTAP8-1Q8IUC2 63 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 LINC01558Q9Y6Z2 57 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 MYH4Q9Y623 1939 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 SMIM31A0A1B0GVY4 71 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 KANTRA0A1W2PQU2 76 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 DEFB4AO15263 64 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 C3orf79P0CE67 100 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 S100A3P33764 101 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 ADIRFQ15847 76 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 DEFB136Q30KP8 78 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 Q6ZRX8 168 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 C6orf201Q7Z4U5 140 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 FAM103A1Q9BTL3 118 aaKnown RBP0.39□□□□□ -2.35
KNL1-203ENST00000526913 NXT2Q9NPJ8 142 aaKnown RBP0.39□□□□□ -2.35
KNL1-203ENST00000526913 F8VRH5 84 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 SYS1-DBNDD2H3BUS1 97 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 MGPP08493 103 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms