RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 FAM229BQ4G0N7 80 aa13.14□□□□□ -0.31
ME3-205ENST00000526504 PKHD1L1Q86WI1 4243 aa13.13□□□□□ -0.31
ME3-205ENST00000526504 CASC2Q6XLA1 102 aa13.12□□□□□ -0.31
ME3-205ENST00000526504 C5orf47Q569G3 176 aa13.09□□□□□ -0.31
ME3-205ENST00000526504 FLG2Q5D862 2391 aaPredicted RBP13.08□□□□□ -0.31
ME3-205ENST00000526504 MMP24-AS1A0A0U1RRL7 71 aa13.08□□□□□ -0.32
ME3-205ENST00000526504 RPS28P62857 69 aaKnown RBP13.06□□□□□ -0.32
ME3-205ENST00000526504 ASB16-AS1Q495Z4 193 aa13.05□□□□□ -0.32
ME3-205ENST00000526504 ABCA13Q86UQ4 5058 aa13.05□□□□□ -0.32
ME3-205ENST00000526504 A0A087X002 238 aa13.04□□□□□ -0.32
ME3-205ENST00000526504 KRTAP13-2Q52LG2 175 aa13.04□□□□□ -0.32
ME3-205ENST00000526504 KRTAP1-4P0C5Y4 121 aa13.04□□□□□ -0.32
ME3-205ENST00000526504 FAM236DA0A1B0GTK5 79 aa13.03□□□□□ -0.32
ME3-205ENST00000526504 FAM236CP0DP71 79 aa13.03□□□□□ -0.32
ME3-205ENST00000526504 A0A1B0GVX0 72 aa13.02□□□□□ -0.32
ME3-205ENST00000526504 hDV103S1A0JD37 113 aa13.01□□□□□ -0.33
ME3-205ENST00000526504 ZCCHC13Q8WW36 166 aaKnown RBP13.01□□□□□ -0.33
ME3-205ENST00000526504 C8orf17Q9NRJ1 99 aa13□□□□□ -0.33
ME3-205ENST00000526504 MYCBP2O75592 4640 aa12.99□□□□□ -0.33
ME3-205ENST00000526504 Q5XG85 94 aa12.99□□□□□ -0.33
ME3-205ENST00000526504 ATP5EP56381 51 aaPredicted RBP12.97□□□□□ -0.33
ME3-205ENST00000526504 LRP1Q07954 4544 aaKnown RBP12.95□□□□□ -0.34
ME3-205ENST00000526504 IGHV6-1A0A0B4J1U7 121 aa12.94□□□□□ -0.34
ME3-205ENST00000526504 MP68P56378 58 aa12.94□□□□□ -0.34
ME3-205ENST00000526504 H3BPC8 53 aa12.92□□□□□ -0.34
ME3-205ENST00000526504 PRR26Q8N8Z3 221 aa12.92□□□□□ -0.34
ME3-205ENST00000526504 OXTP01178 125 aa12.91□□□□□ -0.34
ME3-205ENST00000526504 FAT3Q8TDW7 4589 aa12.91□□□□□ -0.34
ME3-205ENST00000526504 TP53AIP1Q9HCN2 124 aa12.89□□□□□ -0.35
ME3-205ENST00000526504 SERP1Q9Y6X1 66 aa12.87□□□□□ -0.35
ME3-205ENST00000526504 H0Y9P7 68 aa12.86□□□□□ -0.35
ME3-205ENST00000526504 PCLOQ9Y6V0 5065 aa12.85□□□□□ -0.35
ME3-205ENST00000526504 MRPL34Q9BQ48 92 aaKnown RBP12.85□□□□□ -0.35
ME3-205ENST00000526504 LIMD2Q9BT23 127 aa12.84□□□□□ -0.35
ME3-205ENST00000526504 NOTCH2NLQ7Z3S9 236 aa12.83□□□□□ -0.36
ME3-205ENST00000526504 TYMSOSQ8TAI1 123 aa12.83□□□□□ -0.36
ME3-205ENST00000526504 TRAV22A0A0B4J277 110 aa12.82□□□□□ -0.36
ME3-205ENST00000526504 C8orf87E5RJ46 101 aa12.82□□□□□ -0.36
ME3-205ENST00000526504 KRTAP10-8P60410 259 aa12.82□□□□□ -0.36
ME3-205ENST00000526504 C1orf195Q5TG92 126 aa12.82□□□□□ -0.36
ME3-205ENST00000526504 LINC00208Q96KT6 92 aa12.82□□□□□ -0.36
ME3-205ENST00000526504 MT1HL1P0DM35 61 aa12.79□□□□□ -0.36
ME3-205ENST00000526504 SPINK1P00995 79 aa12.77□□□□□ -0.36
ME3-205ENST00000526504 C4orf48Q5BLP8 95 aa12.77□□□□□ -0.36
ME3-205ENST00000526504 TNXBP22105 4242 aa12.77□□□□□ -0.37
ME3-205ENST00000526504 J3QL48 77 aa12.76□□□□□ -0.37
ME3-205ENST00000526504 C1orf64Q8NEQ6 169 aa12.74□□□□□ -0.37
ME3-205ENST00000526504 DMBT1Q9UGM3 2413 aaPredicted RBP12.72□□□□□ -0.37
ME3-205ENST00000526504 NDUFS5O43920 106 aa12.72□□□□□ -0.37
ME3-205ENST00000526504 RPS29P62273 56 aaKnown RBP12.72□□□□□ -0.37
ME3-205ENST00000526504 LINC00313P59037 77 aa12.69□□□□□ -0.38
ME3-205ENST00000526504 SPAG11AQ6PDA7 123 aa12.69□□□□□ -0.38
ME3-205ENST00000526504 LINC00304Q8N9R0 145 aa12.69□□□□□ -0.38
ME3-205ENST00000526504 CYP4F30PQ9H0H9 118 aa12.68□□□□□ -0.38
ME3-205ENST00000526504 SPANXA2-OT1Q8N9U9 137 aa12.67□□□□□ -0.38
ME3-205ENST00000526504 Q8N9P0 234 aaPredicted RBP12.62□□□□□ -0.39
ME3-205ENST00000526504 KRTAP13-3Q3SY46 172 aa12.61□□□□□ -0.39
ME3-205ENST00000526504 SMIM26A0A096LP01 95 aa12.59□□□□□ -0.39
ME3-205ENST00000526504 KRTAP16-1A8MUX0 517 aa12.58□□□□□ -0.4
ME3-205ENST00000526504 Q5W150 140 aa12.56□□□□□ -0.4
ME3-205ENST00000526504 LOC101927531A0A1B0GV80 90 aa12.54□□□□□ -0.4
ME3-205ENST00000526504 IGLV7-46A0A075B6I9 117 aa12.52□□□□□ -0.41
ME3-205ENST00000526504 PRR4Q16378 134 aa12.51□□□□□ -0.41
ME3-205ENST00000526504 FP248Q71RG6 208 aaPredicted RBP12.48□□□□□ -0.41
ME3-205ENST00000526504 PCOTHQ58A44 107 aa12.46□□□□□ -0.41
ME3-205ENST00000526504 HERC1Q15751 4861 aa12.42□□□□□ -0.42
ME3-205ENST00000526504 C4orf26Q17RF5 130 aa12.37□□□□□ -0.43
ME3-205ENST00000526504 RETNLBQ9BQ08 111 aa12.37□□□□□ -0.43
ME3-205ENST00000526504 IGKV2-30P06310 120 aa12.33□□□□□ -0.44
ME3-205ENST00000526504 COA5Q86WW8 74 aa12.27□□□□□ -0.45
ME3-205ENST00000526504 Q1T7F1 81 aa12.26□□□□□ -0.45
ME3-205ENST00000526504 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
ME3-205ENST00000526504 HRES1P13985 223 aa12.23□□□□□ -0.45
ME3-205ENST00000526504 C20orf166-AS1Q96NR2 134 aa12.22□□□□□ -0.45
ME3-205ENST00000526504 A8MUU9 505 aa12.2□□□□□ -0.46
ME3-205ENST00000526504 V9GYY9 64 aa12.17□□□□□ -0.46
ME3-205ENST00000526504 C9orf92A6NGG3 77 aa12.15□□□□□ -0.46
ME3-205ENST00000526504 DMAC1Q96GE9 116 aa12.15□□□□□ -0.46
ME3-205ENST00000526504 HMCN2Q8NDA2 5059 aa12.14□□□□□ -0.47
ME3-205ENST00000526504 IGKV2D-30A0A075B6S6 120 aa12.14□□□□□ -0.47
ME3-205ENST00000526504 ACYP2P14621 99 aa12.13□□□□□ -0.47
ME3-205ENST00000526504 C7orf65Q6ZTY9 151 aa12.1□□□□□ -0.47
ME3-205ENST00000526504 TPRXLQ17RH7 258 aa12.07□□□□□ -0.48
ME3-205ENST00000526504 Q75L30 129 aa12.03□□□□□ -0.48
ME3-205ENST00000526504 LPAP08519 4548 aa12.01□□□□□ -0.49
ME3-205ENST00000526504 PSPHP1O15172 72 aa11.95□□□□□ -0.5
ME3-205ENST00000526504 LRP2P98164 4655 aa11.95□□□□□ -0.5
ME3-205ENST00000526504 LINC01558Q9Y6Z2 57 aa11.95□□□□□ -0.5
ME3-205ENST00000526504 A8MUN3 132 aa11.93□□□□□ -0.5
ME3-205ENST00000526504 CHKB-CPT1BH3BT56 60 aa11.9□□□□□ -0.5
ME3-205ENST00000526504 Q5VV11 94 aa11.9□□□□□ -0.51
ME3-205ENST00000526504 XP32Q5T750 250 aa11.89□□□□□ -0.51
ME3-205ENST00000526504 SVIPQ8NHG7 77 aa11.87□□□□□ -0.51
ME3-205ENST00000526504 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
ME3-205ENST00000526504 SPINK7P58062 85 aa11.84□□□□□ -0.51
ME3-205ENST00000526504 RPL37P61927 97 aaKnown RBP11.81□□□□□ -0.52
ME3-205ENST00000526504 PRO0628Q9UI54 55 aa11.8□□□□□ -0.52
ME3-205ENST00000526504 ATP11AUNQ6ZP68 121 aa11.79□□□□□ -0.52
ME3-205ENST00000526504 BRK1Q8WUW1 75 aa11.79□□□□□ -0.52
ME3-205ENST00000526504 SEC61BP60468 96 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms