RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 WFDC9Q8NEX5 89 aa1.04□□□□□ -2.24
TRAPPC4-207ENST00000526141 HERC1Q15751 4861 aa1.04□□□□□ -2.24
TRAPPC4-207ENST00000526141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.03□□□□□ -2.246e-8■■□□□ 12.2
TRAPPC4-207ENST00000526141 SONP18583 2426 aaKnown RBP1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 COX7BP24311 80 aa1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 ATXN8Q156A1 80 aa1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 NREPQ16612 68 aa1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 C10orf95Q9H7T3 257 aa1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 TRRAPQ9Y4A5 3859 aa1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 MUC2Q02817 5179 aa1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 DYNC2H1Q8NCM8 4307 aaKnown RBP1.03□□□□□ -2.24
TRAPPC4-207ENST00000526141 MYO7BQ6PIF6 2116 aa1.03□□□□□ -2.25
TRAPPC4-207ENST00000526141 DNAJC13O75165 2243 aa1.03□□□□□ -2.25
TRAPPC4-207ENST00000526141 A0A0D9SG42 100 aa1.02□□□□□ -2.25
TRAPPC4-207ENST00000526141 CNFNQ9BYD5 112 aa1.02□□□□□ -2.25
TRAPPC4-207ENST00000526141 TP53AIP1Q9HCN2 124 aa1.02□□□□□ -2.25
TRAPPC4-207ENST00000526141 TENM2Q9NT68 2774 aa1.02□□□□□ -2.25
TRAPPC4-207ENST00000526141 ZANQ9Y493 2812 aa1.02□□□□□ -2.25
TRAPPC4-207ENST00000526141 KNTC1P50748 2209 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 CMYA5Q8N3K9 4069 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 I3L2K1 104 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 SFTA3P0C7M3 94 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 C3orf79P0CE67 100 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 PIGYQ3MUY2 71 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 GNG13Q9P2W3 67 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 SORL1Q92673 2214 aa1.01□□□□□ -2.25
TRAPPC4-207ENST00000526141 FRAS1Q86XX4 4008 aa1□□□□□ -2.25
TRAPPC4-207ENST00000526141 PKDREJQ9NTG1 2253 aa1□□□□□ -2.25
TRAPPC4-207ENST00000526141 ANK3Q12955 4377 aaKnown RBP1□□□□□ -2.25
TRAPPC4-207ENST00000526141 SACSQ9NZJ4 4579 aa0.99□□□□□ -2.25
TRAPPC4-207ENST00000526141 DNAH1Q9P2D7 4330 aa0.99□□□□□ -2.25
TRAPPC4-207ENST00000526141 FXYD6-FXYD2A0A087WZ82 144 aa0.99□□□□□ -2.25
TRAPPC4-207ENST00000526141 SPTY2D1-AS1A0A0U1RR47 76 aa0.99□□□□□ -2.25
TRAPPC4-207ENST00000526141 RPL38P63173 70 aaKnown RBP0.99□□□□□ -2.25
TRAPPC4-207ENST00000526141 FAT4Q6V0I7 4981 aa0.99□□□□□ -2.25
TRAPPC4-207ENST00000526141 HRNRQ86YZ3 2850 aaPredicted RBP0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 MYH4Q9Y623 1939 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 COX6A2Q02221 97 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 DEFB124Q8NES8 71 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 USMG5Q96IX5 58 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 CRIPTQ9P021 101 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 CSMD3Q7Z407 3707 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 HECTD4Q9Y4D8 3996 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 COL7A1Q02388 2944 aa0.98□□□□□ -2.25
TRAPPC4-207ENST00000526141 AKAP6Q13023 2319 aa0.97□□□□□ -2.25
TRAPPC4-207ENST00000526141 CPSF4LA6NMK7 179 aaKnown RBP0.97□□□□□ -2.25
TRAPPC4-207ENST00000526141 LYSTQ99698 3801 aa0.97□□□□□ -2.25
TRAPPC4-207ENST00000526141 Q8IZM0 81 aa0.96□□□□□ -2.26
TRAPPC4-207ENST00000526141 FAM103A1Q9BTL3 118 aaKnown RBP0.96□□□□□ -2.26
TRAPPC4-207ENST00000526141 PRO0255Q9UI72 69 aa0.96□□□□□ -2.26
TRAPPC4-207ENST00000526141 CACNA1CQ13936 2221 aa0.96□□□□□ -2.26
TRAPPC4-207ENST00000526141 KNL1Q8NG31 2342 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 CADP27708 2225 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 I3L3M4 83 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 K7EQZ3 153 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 NDUFA4O00483 81 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 ENHOQ6UWT2 76 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 RNF213Q63HN8 5207 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 STAB2Q8WWQ8 2551 aa0.95□□□□□ -2.26
TRAPPC4-207ENST00000526141 HMCN2Q8NDA2 5059 aa0.93□□□□□ -2.26
TRAPPC4-207ENST00000526141 KMT2AQ03164 3969 aa0.93□□□□□ -2.26
TRAPPC4-207ENST00000526141 LINC01549A6NIU2 74 aa0.93□□□□□ -2.26
TRAPPC4-207ENST00000526141 UBL5Q9BZL1 73 aa0.93□□□□□ -2.26
TRAPPC4-207ENST00000526141 DNAH7Q8WXX0 4024 aa0.93□□□□□ -2.26
TRAPPC4-207ENST00000526141 DMBT1Q9UGM3 2413 aaPredicted RBP0.92□□□□□ -2.26
TRAPPC4-207ENST00000526141 COX6B1P14854 86 aa0.92□□□□□ -2.26
TRAPPC4-207ENST00000526141 PRB3Q04118 309 aaPredicted RBP0.92□□□□□ -2.26
TRAPPC4-207ENST00000526141 SMR3AQ99954 134 aa0.92□□□□□ -2.26
TRAPPC4-207ENST00000526141 MRPL34Q9BQ48 92 aaKnown RBP0.92□□□□□ -2.26
TRAPPC4-207ENST00000526141 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
TRAPPC4-207ENST00000526141 STARD9Q9P2P6 4700 aa0.91□□□□□ -2.26
TRAPPC4-207ENST00000526141 PKHD1P08F94 4074 aa0.91□□□□□ -2.26
TRAPPC4-207ENST00000526141 FCGBPQ9Y6R7 5405 aaPredicted RBP0.91□□□□□ -2.26
TRAPPC4-207ENST00000526141 DNAH3Q8TD57 4116 aa0.91□□□□□ -2.26
TRAPPC4-207ENST00000526141 ROS1P08922 2347 aa0.91□□□□□ -2.26
TRAPPC4-207ENST00000526141 Q5VSD8 79 aa0.91□□□□□ -2.26
TRAPPC4-207ENST00000526141 CCL22O00626 93 aa0.9□□□□□ -2.27
TRAPPC4-207ENST00000526141 COX6B2Q6YFQ2 88 aa0.9□□□□□ -2.27
TRAPPC4-207ENST00000526141 KCNQ1DNQ9H478 68 aa0.9□□□□□ -2.27
TRAPPC4-207ENST00000526141 USF3Q68DE3 2245 aa0.9□□□□□ -2.27
TRAPPC4-207ENST00000526141 DNAH9Q9NYC9 4486 aa0.89□□□□□ -2.27
TRAPPC4-207ENST00000526141 ALMS1Q8TCU4 4167 aa0.88□□□□□ -2.27
TRAPPC4-207ENST00000526141 HSPG2P98160 4391 aa0.88□□□□□ -2.27
TRAPPC4-207ENST00000526141 MRPL33O75394 65 aaKnown RBP0.88□□□□□ -2.27
TRAPPC4-207ENST00000526141 DEFB114Q30KQ6 69 aa0.88□□□□□ -2.27
TRAPPC4-207ENST00000526141 MYCBP2O75592 4640 aa0.88□□□□□ -2.27
TRAPPC4-207ENST00000526141 PLECQ15149 4684 aaKnown RBP0.87□□□□□ -2.27
TRAPPC4-207ENST00000526141 DNAH10Q8IVF4 4471 aa0.87□□□□□ -2.27
TRAPPC4-207ENST00000526141 HUWE1Q7Z6Z7 4374 aaKnown RBP0.87□□□□□ -2.27
TRAPPC4-207ENST00000526141 DEFB131BA0A096LNP1 70 aa0.87□□□□□ -2.27
TRAPPC4-207ENST00000526141 SPRR1AP35321 89 aa0.87□□□□□ -2.27
TRAPPC4-207ENST00000526141 FAT2Q9NYQ8 4349 aa0.87□□□□□ -2.27
TRAPPC4-207ENST00000526141 SYNE2Q8WXH0 6885 aaKnown RBP0.87□□□□□ -2.27
TRAPPC4-207ENST00000526141 DYNC1H1Q14204 4646 aaKnown RBP0.86□□□□□ -2.27
TRAPPC4-207ENST00000526141 ETDCA0A1B0GVM5 59 aa0.86□□□□□ -2.27
TRAPPC4-207ENST00000526141 NEBP20929 6669 aa0.86□□□□□ -2.27
TRAPPC4-207ENST00000526141 WNK2Q9Y3S1 2297 aa0.86□□□□□ -2.27
TRAPPC4-207ENST00000526141 GPR98Q8WXG9 6306 aa0.85□□□□□ -2.27
TRAPPC4-207ENST00000526141 SPRR1BP22528 89 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms