RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 NSD1Q96L73 2696 aaPredicted RBP1.6□□□□□ -2.15
PCM1-222ENST00000524226 ANK2Q01484 3957 aa1.6□□□□□ -2.15
PCM1-222ENST00000524226 SPINK7P58062 85 aa1.6□□□□□ -2.15
PCM1-222ENST00000524226 ROMO1P60602 79 aa1.6□□□□□ -2.15
PCM1-222ENST00000524226 RPL37P61927 97 aaKnown RBP1.6□□□□□ -2.15
PCM1-222ENST00000524226 TEP1Q99973 2627 aaKnown RBP1.6□□□□□ -2.15
PCM1-222ENST00000524226 KRTAP3-3Q9BYR6 98 aa1.6□□□□□ -2.15
PCM1-222ENST00000524226 KRTAP3-2Q9BYR7 98 aa1.6□□□□□ -2.15
PCM1-222ENST00000524226 A0A1W2PNN7 141 aa1.59□□□□□ -2.15
PCM1-222ENST00000524226 SPRR1BP22528 89 aa1.59□□□□□ -2.15
PCM1-222ENST00000524226 MMP24-AS1A0A0U1RRL7 71 aa1.59□□□□□ -2.15
PCM1-222ENST00000524226 R4GN34 69 aa1.59□□□□□ -2.15
PCM1-222ENST00000524226 HUWE1Q7Z6Z7 4374 aaKnown RBP1.59□□□□□ -2.16
PCM1-222ENST00000524226 SPRR1AP35321 89 aa1.59□□□□□ -2.16
PCM1-222ENST00000524226 JMJD1CQ15652 2540 aa1.59□□□□□ -2.16
PCM1-222ENST00000524226 KMT2AQ03164 3969 aa1.58□□□□□ -2.16
PCM1-222ENST00000524226 Q5VV11 94 aa1.58□□□□□ -2.16
PCM1-222ENST00000524226 FP248Q71RG6 208 aaPredicted RBP1.58□□□□□ -2.16
PCM1-222ENST00000524226 PLAC8Q9NZF1 115 aa1.58□□□□□ -2.16
PCM1-222ENST00000524226 KRTAP10-1P60331 282 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 Q5XG85 94 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 ATRQ13535 2644 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 SETD2Q9BYW2 2564 aaPredicted RBP1.57□□□□□ -2.16
PCM1-222ENST00000524226 Q6ZRN7 208 aaPredicted RBP1.57□□□□□ -2.16
PCM1-222ENST00000524226 KRTAP16-1A8MUX0 517 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 Q5W150 140 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 Q6ZR54 194 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 KRTAP4-16G5E9R7 235 aaPredicted RBP1.57□□□□□ -2.16
PCM1-222ENST00000524226 NOTCH2NLQ7Z3S9 236 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 ANAPC11Q9NYG5 84 aa1.57□□□□□ -2.16
PCM1-222ENST00000524226 TRRAPQ9Y4A5 3859 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 A0A0G2JQZ4 141 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 H1FX-AS1Q4G0G2 97 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 A0A087X002 238 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 KRTAP10-2P60368 255 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 PLAC4Q8WY50 150 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 BAHCC1Q9P281 2608 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 KRTAP7-1Q8IUC3 87 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 NF1P21359 2839 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 PRAC1Q96KF2 57 aa1.56□□□□□ -2.16
PCM1-222ENST00000524226 DYNC2H1Q8NCM8 4307 aaKnown RBP1.55□□□□□ -2.16
PCM1-222ENST00000524226 FBN1P35555 2871 aaKnown RBP1.55□□□□□ -2.16
PCM1-222ENST00000524226 DNAH1Q9P2D7 4330 aa1.55□□□□□ -2.16
PCM1-222ENST00000524226 DNAH9Q9NYC9 4486 aa1.55□□□□□ -2.16
PCM1-222ENST00000524226 ALMS1Q8TCU4 4167 aa1.54□□□□□ -2.16
PCM1-222ENST00000524226 TENM1Q9UKZ4 2725 aa1.54□□□□□ -2.16
PCM1-222ENST00000524226 PANO1I0J062 215 aa1.54□□□□□ -2.16
PCM1-222ENST00000524226 M0QZ58 72 aa1.54□□□□□ -2.16
PCM1-222ENST00000524226 SPATA8Q6RVD6 105 aa1.54□□□□□ -2.16
PCM1-222ENST00000524226 NIPBLQ6KC79 2804 aaeCLIP1.53□□□□□ -2.161e-6■■■□□ 14.6
PCM1-222ENST00000524226 NBEAL2Q6ZNJ1 2754 aa1.53□□□□□ -2.16
PCM1-222ENST00000524226 MAST4O15021 2626 aa1.53□□□□□ -2.16
PCM1-222ENST00000524226 FLNBO75369 2602 aaKnown RBP1.53□□□□□ -2.17
PCM1-222ENST00000524226 RPS29P62273 56 aaKnown RBP1.53□□□□□ -2.17
PCM1-222ENST00000524226 KRTAP11-1Q8IUC1 163 aa1.53□□□□□ -2.17
PCM1-222ENST00000524226 KRTAP13-1Q8IUC0 172 aa1.52□□□□□ -2.17
PCM1-222ENST00000524226 VWFP04275 2813 aa1.52□□□□□ -2.17
PCM1-222ENST00000524226 LCE2BO14633 110 aa1.52□□□□□ -2.17
PCM1-222ENST00000524226 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
PCM1-222ENST00000524226 DNAH7Q8WXX0 4024 aa1.51□□□□□ -2.17
PCM1-222ENST00000524226 STAB1Q9NY15 2570 aa1.51□□□□□ -2.17
PCM1-222ENST00000524226 KRTAP29-1A8MX34 341 aaPredicted RBP1.5□□□□□ -2.17
PCM1-222ENST00000524226 ADM2Q7Z4H4 148 aa1.5□□□□□ -2.17
PCM1-222ENST00000524226 COL6A5A8TX70 2615 aa1.5□□□□□ -2.17
PCM1-222ENST00000524226 PP632Q6XCG6 107 aa1.5□□□□□ -2.17
PCM1-222ENST00000524226 FLG2Q5D862 2391 aaPredicted RBP1.49□□□□□ -2.17
PCM1-222ENST00000524226 A6NN06 94 aa1.49□□□□□ -2.17
PCM1-222ENST00000524226 VPS13DQ5THJ4 4388 aa1.49□□□□□ -2.17
PCM1-222ENST00000524226 C20orf166-AS1Q96NR2 134 aa1.49□□□□□ -2.17
PCM1-222ENST00000524226 PLECQ15149 4684 aaKnown RBP1.49□□□□□ -2.17
PCM1-222ENST00000524226 CYSTM1Q9H1C7 97 aa1.49□□□□□ -2.17
PCM1-222ENST00000524226 TENM3Q9P273 2699 aa1.48□□□□□ -2.17
PCM1-222ENST00000524226 PRKDCP78527 4128 aaKnown RBP1.48□□□□□ -2.17
PCM1-222ENST00000524226 DNAH10Q8IVF4 4471 aa1.48□□□□□ -2.17
PCM1-222ENST00000524226 TNP1P09430 55 aa1.48□□□□□ -2.17
PCM1-222ENST00000524226 HECTD4Q9Y4D8 3996 aa1.47□□□□□ -2.17
PCM1-222ENST00000524226 STARD9Q9P2P6 4700 aa1.47□□□□□ -2.17
PCM1-222ENST00000524226 NOTCH1P46531 2555 aa1.47□□□□□ -2.17
PCM1-222ENST00000524226 LYSTQ99698 3801 aa1.47□□□□□ -2.17
PCM1-222ENST00000524226 MGAM2Q2M2H8 2515 aa1.47□□□□□ -2.17
PCM1-222ENST00000524226 A8MUU9 505 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 DNAH2Q9P225 4427 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 PKD1L1Q8TDX9 2849 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 NBEAL1Q6ZS30 2694 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 NDUFAF8A1L188 74 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 A0A1B0GVY2 172 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 KRTAP13-2Q52LG2 175 aa1.46□□□□□ -2.18
PCM1-222ENST00000524226 LCE2CQ5TA81 110 aa1.45□□□□□ -2.18
PCM1-222ENST00000524226 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
PCM1-222ENST00000524226 FRAS1Q86XX4 4008 aa1.44□□□□□ -2.18
PCM1-222ENST00000524226 KRTAP1-4P0C5Y4 121 aa1.44□□□□□ -2.18
PCM1-222ENST00000524226 CSMD3Q7Z407 3707 aa1.43□□□□□ -2.18
PCM1-222ENST00000524226 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
PCM1-222ENST00000524226 DMBT1Q9UGM3 2413 aaPredicted RBP1.42□□□□□ -2.18
PCM1-222ENST00000524226 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
PCM1-222ENST00000524226 DNHD1Q96M86 4753 aa1.42□□□□□ -2.18
PCM1-222ENST00000524226 MEGF8Q7Z7M0 2845 aa1.42□□□□□ -2.18
PCM1-222ENST00000524226 KRTAP23-1A1A580 65 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms