RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 EPG5Q9HCE0 2579 aa0.54□□□□□ -2.32
PCM1-219ENST00000523540 PRKDCP78527 4128 aaKnown RBP0.54□□□□□ -2.32
PCM1-219ENST00000523540 LINC01590Q5TEZ4 76 aa0.54□□□□□ -2.32
PCM1-219ENST00000523540 LEAP2Q969E1 77 aa0.54□□□□□ -2.32
PCM1-219ENST00000523540 NBEAL2Q6ZNJ1 2754 aa0.54□□□□□ -2.32
PCM1-219ENST00000523540 SPTBN4Q9H254 2564 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 WDR87Q6ZQQ6 2873 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 NBEAQ8NFP9 2946 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 FRYQ5TBA9 3013 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 LRRK2Q5S007 2527 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 H3BSH0 61 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 M0QY20 66 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 SPINK1P00995 79 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 CLPSL2Q6UWE3 100 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 CHD8Q9HCK8 2581 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 COL6A5A8TX70 2615 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 FLNBO75369 2602 aaKnown RBP0.53□□□□□ -2.32
PCM1-219ENST00000523540 VPS13BQ7Z7G8 4022 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
PCM1-219ENST00000523540 MXRA5Q9NR99 2828 aa0.53□□□□□ -2.32
PCM1-219ENST00000523540 CELSR1Q9NYQ6 3014 aa0.53□□□□□ -2.33
PCM1-219ENST00000523540 NCOR1O75376 2440 aa0.53□□□□□ -2.33
PCM1-219ENST00000523540 NAV2Q8IVL1 2488 aa0.53□□□□□ -2.33
PCM1-219ENST00000523540 DMXL1Q9Y485 3027 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 NBASA2RRP1 2371 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 A8MTW9 85 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 H0YGG7 62 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 PRCDQ00LT1 54 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 TOMM7Q9P0U1 55 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 WNK1Q9H4A3 2382 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 NCOR2Q9Y618 2525 aa0.52□□□□□ -2.33
PCM1-219ENST00000523540 DCHS2Q6V1P9 2916 aa0.51□□□□□ -2.33
PCM1-219ENST00000523540 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
PCM1-219ENST00000523540 EP300Q09472 2414 aaPredicted RBP0.51□□□□□ -2.33
PCM1-219ENST00000523540 PTPN13Q12923 2485 aa0.51□□□□□ -2.33
PCM1-219ENST00000523540 DEFB135Q30KP9 77 aa0.51□□□□□ -2.33
PCM1-219ENST00000523540 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
PCM1-219ENST00000523540 NIPBLQ6KC79 2804 aaeCLIP0.51□□□□□ -2.33
PCM1-219ENST00000523540 HIVEP3Q5T1R4 2406 aa0.5□□□□□ -2.33
PCM1-219ENST00000523540 TNXBP22105 4242 aa0.5□□□□□ -2.33
PCM1-219ENST00000523540 NBPF19A0A087WUL8 3843 aa0.5□□□□□ -2.33
PCM1-219ENST00000523540 RIF1Q5UIP0 2472 aaKnown RBP0.5□□□□□ -2.33
PCM1-219ENST00000523540 LRBAP50851 2863 aa0.5□□□□□ -2.33
PCM1-219ENST00000523540 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
PCM1-219ENST00000523540 ACACAQ13085 2346 aa0.49□□□□□ -2.33
PCM1-219ENST00000523540 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
PCM1-219ENST00000523540 TEP1Q99973 2627 aaKnown RBP0.48□□□□□ -2.33
PCM1-219ENST00000523540 USP9XQ93008 2570 aaPredicted RBP0.48□□□□□ -2.33
PCM1-219ENST00000523540 M0R2T5 61 aa0.48□□□□□ -2.33
PCM1-219ENST00000523540 SPINK6Q6UWN8 80 aa0.48□□□□□ -2.33
PCM1-219ENST00000523540 KMT2DO14686 5537 aa0.48□□□□□ -2.33
PCM1-219ENST00000523540 CACNA1AO00555 2505 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 BSNQ9UPA5 3926 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 CFAP54Q96N23 3096 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 M0QZ58 72 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 DEFB104AQ8WTQ1 72 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 COL12A1Q99715 3063 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 CEP250Q9BV73 2442 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
PCM1-219ENST00000523540 MTORP42345 2549 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
PCM1-219ENST00000523540 FAT2Q9NYQ8 4349 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 SACSQ9NZJ4 4579 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 DNAH11Q96DT5 4516 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 HRNRQ86YZ3 2850 aaPredicted RBP0.46□□□□□ -2.34
PCM1-219ENST00000523540 MYO18BQ8IUG5 2567 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 TGP01266 2768 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 SPENQ96T58 3664 aaKnown RBP0.46□□□□□ -2.34
PCM1-219ENST00000523540 COL7A1Q02388 2944 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 DMBT1Q9UGM3 2413 aaPredicted RBP0.46□□□□□ -2.34
PCM1-219ENST00000523540 HTTP42858 3142 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 ZANQ9Y493 2812 aa0.46□□□□□ -2.34
PCM1-219ENST00000523540 SPG11Q96JI7 2443 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 FAM186AA6NE01 2351 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 K7EIM0 57 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 TMEM167AQ8TBQ9 72 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 SMR3AQ99954 134 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 ITPR2Q14571 2701 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 ACANP16112 2415 aa0.45□□□□□ -2.34
PCM1-219ENST00000523540 FLNAP21333 2647 aaKnown RBP0.45□□□□□ -2.34
PCM1-219ENST00000523540 TLN2Q9Y4G6 2542 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 ZFHX4Q86UP3 3567 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 MAST4O15021 2626 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 FLGP20930 4061 aaPredicted RBP0.44□□□□□ -2.34
PCM1-219ENST00000523540 C9orf92A6NGG3 77 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 TNP1P09430 55 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 KRTAP2-3P0C7H8 128 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 KRTAP2-4Q9BYR9 128 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 KRTAP2-1Q9BYU5 128 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 U3KQA8 63 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 PKD1P98161 4303 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 PRUNE2Q8WUY3 3088 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 AKAP9Q99996 3911 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 CENPEQ02224 2701 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 CFAP46Q8IYW2 2715 aa0.44□□□□□ -2.34
PCM1-219ENST00000523540 FASNP49327 2511 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 271.7 ms