RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 A8MWP4 228 aa4□□□□□ -1.77
SHPRH-210ENST00000523276 KRTAP10-2P60368 255 aa4□□□□□ -1.77
SHPRH-210ENST00000523276 TGP01266 2768 aa4□□□□□ -1.77
SHPRH-210ENST00000523276 PRR15Q8IV56 129 aa4□□□□□ -1.77
SHPRH-210ENST00000523276 PKD1P98161 4303 aa3.99□□□□□ -1.77
SHPRH-210ENST00000523276 KRTAP29-1A8MX34 341 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-210ENST00000523276 IGLV7-43P04211 117 aa3.99□□□□□ -1.77
SHPRH-210ENST00000523276 FAT2Q9NYQ8 4349 aa3.99□□□□□ -1.77
SHPRH-210ENST00000523276 MOBPQ13875 183 aa3.99□□□□□ -1.77
SHPRH-210ENST00000523276 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
SHPRH-210ENST00000523276 KRTAP9-3Q9BYQ3 159 aa3.99□□□□□ -1.77
SHPRH-210ENST00000523276 ANAPC11Q9NYG5 84 aa3.99□□□□□ -1.77
SHPRH-210ENST00000523276 OXTP01178 125 aa3.98□□□□□ -1.77
SHPRH-210ENST00000523276 CIRBP-AS1Q8TBR5 109 aa3.98□□□□□ -1.77
SHPRH-210ENST00000523276 Q96NJ1 140 aa3.98□□□□□ -1.77
SHPRH-210ENST00000523276 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-210ENST00000523276 CASC2Q6XLA1 102 aa3.97□□□□□ -1.77
SHPRH-210ENST00000523276 HYDINQ4G0P3 5121 aa3.97□□□□□ -1.77
SHPRH-210ENST00000523276 C5orf47Q569G3 176 aa3.97□□□□□ -1.77
SHPRH-210ENST00000523276 HRCT1Q6UXD1 115 aa3.97□□□□□ -1.77
SHPRH-210ENST00000523276 Q6ZSA8 131 aa3.97□□□□□ -1.77
SHPRH-210ENST00000523276 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
SHPRH-210ENST00000523276 KRTAP10-1P60331 282 aa3.96□□□□□ -1.78
SHPRH-210ENST00000523276 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.78
SHPRH-210ENST00000523276 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
SHPRH-210ENST00000523276 MMP24-AS1A0A0U1RRL7 71 aa3.95□□□□□ -1.78
SHPRH-210ENST00000523276 NDUFB1O75438 58 aa3.95□□□□□ -1.78
SHPRH-210ENST00000523276 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
SHPRH-210ENST00000523276 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
SHPRH-210ENST00000523276 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
SHPRH-210ENST00000523276 hDV103S1A0JD37 113 aa3.93□□□□□ -1.78
SHPRH-210ENST00000523276 MP68P56378 58 aa3.93□□□□□ -1.78
SHPRH-210ENST00000523276 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
SHPRH-210ENST00000523276 A0A1B0GVX0 72 aa3.92□□□□□ -1.78
SHPRH-210ENST00000523276 CD164Q04900 197 aa3.92□□□□□ -1.78
SHPRH-210ENST00000523276 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
SHPRH-210ENST00000523276 C8orf17Q9NRJ1 99 aa3.92□□□□□ -1.78
SHPRH-210ENST00000523276 H0Y9P7 68 aa3.91□□□□□ -1.78
SHPRH-210ENST00000523276 H3BPC8 53 aa3.91□□□□□ -1.78
SHPRH-210ENST00000523276 IGHV6-1A0A0B4J1U7 121 aa3.9□□□□□ -1.78
SHPRH-210ENST00000523276 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.78
SHPRH-210ENST00000523276 LINC00208Q96KT6 92 aa3.9□□□□□ -1.78
SHPRH-210ENST00000523276 TRAV22A0A0B4J277 110 aa3.9□□□□□ -1.79
SHPRH-210ENST00000523276 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
SHPRH-210ENST00000523276 Q5XG85 94 aa3.9□□□□□ -1.79
SHPRH-210ENST00000523276 A0A087X002 238 aa3.89□□□□□ -1.79
SHPRH-210ENST00000523276 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
SHPRH-210ENST00000523276 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
SHPRH-210ENST00000523276 TP53AIP1Q9HCN2 124 aa3.88□□□□□ -1.79
SHPRH-210ENST00000523276 V9GYY9 64 aa3.88□□□□□ -1.79
SHPRH-210ENST00000523276 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
SHPRH-210ENST00000523276 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
SHPRH-210ENST00000523276 SPINK6Q6UWN8 80 aa3.87□□□□□ -1.79
SHPRH-210ENST00000523276 NOTCH2NLQ7Z3S9 236 aa3.87□□□□□ -1.79
SHPRH-210ENST00000523276 C1orf64Q8NEQ6 169 aa3.87□□□□□ -1.79
SHPRH-210ENST00000523276 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
SHPRH-210ENST00000523276 MRPL34Q9BQ48 92 aaKnown RBP3.87□□□□□ -1.79
SHPRH-210ENST00000523276 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
SHPRH-210ENST00000523276 LINC00336Q6ZUF6 198 aa3.87□□□□□ -1.79
SHPRH-210ENST00000523276 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
SHPRH-210ENST00000523276 C4orf26Q17RF5 130 aa3.86□□□□□ -1.79
SHPRH-210ENST00000523276 FP248Q71RG6 208 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-210ENST00000523276 SPANXA2-OT1Q8N9U9 137 aa3.85□□□□□ -1.79
SHPRH-210ENST00000523276 NDUFS5O43920 106 aa3.85□□□□□ -1.79
SHPRH-210ENST00000523276 C8orf87E5RJ46 101 aa3.84□□□□□ -1.79
SHPRH-210ENST00000523276 PRR4Q16378 134 aa3.84□□□□□ -1.79
SHPRH-210ENST00000523276 PKHD1P08F94 4074 aa3.84□□□□□ -1.8
SHPRH-210ENST00000523276 C1orf195Q5TG92 126 aa3.83□□□□□ -1.8
SHPRH-210ENST00000523276 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
SHPRH-210ENST00000523276 LIMD2Q9BT23 127 aa3.82□□□□□ -1.8
SHPRH-210ENST00000523276 RYR2Q92736 4967 aa3.82□□□□□ -1.8
SHPRH-210ENST00000523276 APOBP04114 4563 aaKnown RBP3.82□□□□□ -1.8
SHPRH-210ENST00000523276 TYMSOSQ8TAI1 123 aa3.81□□□□□ -1.8
SHPRH-210ENST00000523276 IGLV7-46A0A075B6I9 117 aa3.8□□□□□ -1.8
SHPRH-210ENST00000523276 LINC00313P59037 77 aa3.8□□□□□ -1.8
SHPRH-210ENST00000523276 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
SHPRH-210ENST00000523276 PCOTHQ58A44 107 aa3.8□□□□□ -1.8
SHPRH-210ENST00000523276 Q5W150 140 aa3.8□□□□□ -1.8
SHPRH-210ENST00000523276 LOC101927531A0A1B0GV80 90 aa3.78□□□□□ -1.8
SHPRH-210ENST00000523276 SPINK1P00995 79 aa3.78□□□□□ -1.8
SHPRH-210ENST00000523276 Q8N9P0 234 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-210ENST00000523276 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
SHPRH-210ENST00000523276 SMR3BP02814 79 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-210ENST00000523276 FAT1Q14517 4588 aa3.77□□□□□ -1.81
SHPRH-210ENST00000523276 Q1T7F1 81 aa3.77□□□□□ -1.81
SHPRH-210ENST00000523276 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-210ENST00000523276 RPS29P62273 56 aaKnown RBP3.77□□□□□ -1.81
SHPRH-210ENST00000523276 LINC00304Q8N9R0 145 aa3.77□□□□□ -1.81
SHPRH-210ENST00000523276 SPAG11AQ6PDA7 123 aa3.75□□□□□ -1.81
SHPRH-210ENST00000523276 COA5Q86WW8 74 aa3.75□□□□□ -1.81
SHPRH-210ENST00000523276 KMT2CQ8NEZ4 4911 aaKnown RBP3.75□□□□□ -1.81
SHPRH-210ENST00000523276 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
SHPRH-210ENST00000523276 RETNLBQ9BQ08 111 aa3.73□□□□□ -1.81
SHPRH-210ENST00000523276 IGKV2-30P06310 120 aa3.72□□□□□ -1.81
SHPRH-210ENST00000523276 HRES1P13985 223 aa3.71□□□□□ -1.81
SHPRH-210ENST00000523276 Q8N1X5 172 aa3.71□□□□□ -1.82
SHPRH-210ENST00000523276 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SHPRH-210ENST00000523276 A8MUN3 132 aa3.68□□□□□ -1.82
SHPRH-210ENST00000523276 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
SHPRH-210ENST00000523276 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms