RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 LINC00472Q9H8W2 130 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 ANK3Q12955 4377 aaKnown RBP0.21□□□□□ -2.38
CLK4-213ENST00000523013 MYO15AQ9UKN7 3530 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 RANBP2P49792 3224 aaKnown RBP0.21□□□□□ -2.38
CLK4-213ENST00000523013 ASPMQ8IZT6 3477 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 BRCA2P51587 3418 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 PTPRZ1P23471 2315 aaPredicted RBP0.21□□□□□ -2.38
CLK4-213ENST00000523013 POLQO75417 2590 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 CDH23Q9H251 3354 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 A0A0C4DFX4 3053 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 CELSR3Q9NYQ7 3312 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 MKI67P46013 3256 aaKnown RBP0.21□□□□□ -2.38
CLK4-213ENST00000523013 TNRC18O15417 2968 aaPredicted RBP0.21□□□□□ -2.38
CLK4-213ENST00000523013 CHD7Q9P2D1 2997 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 CHD9Q3L8U1 2897 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 CEP350Q5VT06 3117 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
CLK4-213ENST00000523013 NIPBLQ6KC79 2804 aaeCLIP0.2□□□□□ -2.38
CLK4-213ENST00000523013 MEGF8Q7Z7M0 2845 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 DNAH14Q0VDD8 3507 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 AKAP9Q99996 3911 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 TRANK1O15050 2925 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 C9orf92A6NGG3 77 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 SPRR1BP22528 89 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 RPL37P61927 97 aaKnown RBP0.2□□□□□ -2.38
CLK4-213ENST00000523013 KLK9Q2XQG4 91 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 COX6B2Q6YFQ2 88 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 S4R3F8 94 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 FRYLO94915 3013 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 FRYQ5TBA9 3013 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 MYO7BQ6PIF6 2116 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 SMG1Q96Q15 3661 aaKnown RBP0.2□□□□□ -2.38
CLK4-213ENST00000523013 ITPR1Q14643 2758 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 DNAH1Q9P2D7 4330 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 ZFYVE26Q68DK2 2539 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 NBPF19A0A087WUL8 3843 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 VCANP13611 3396 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 LAMA2P24043 3122 aaKnown RBP0.2□□□□□ -2.38
CLK4-213ENST00000523013 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
CLK4-213ENST00000523013 COL6A5A8TX70 2615 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 MAP1AP78559 2803 aaPredicted RBP0.19□□□□□ -2.38
CLK4-213ENST00000523013 AKAP13Q12802 2813 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 CELSR1Q9NYQ6 3014 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 CUBNO60494 3623 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 UTP20O75691 2785 aaKnown RBP0.19□□□□□ -2.38
CLK4-213ENST00000523013 ZZEF1O43149 2961 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 CRYBG3Q68DQ2 2970 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 WDFY4Q6ZS81 3184 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 VPS13DQ5THJ4 4388 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 PTPRQQ9UMZ3 2332 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 DCHS2Q6V1P9 2916 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 DCHS1Q96JQ0 3298 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 DNAH12Q6ZR08 3092 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 BOD1L1Q8NFC6 3051 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
CLK4-213ENST00000523013 H3BNG1 76 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 M0QZ58 72 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 HUWE1Q7Z6Z7 4374 aaKnown RBP0.19□□□□□ -2.38
CLK4-213ENST00000523013 FAM208BQ5VWN6 2430 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 TNCP24821 2201 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 VPS13AQ96RL7 3174 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 SPTBN1Q01082 2364 aaKnown RBP0.19□□□□□ -2.38
CLK4-213ENST00000523013 REV3LO60673 3130 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 NBEAQ8NFP9 2946 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 NCOR2Q9Y618 2525 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 ATMQ13315 3056 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 PRUNE2Q8WUY3 3088 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 AKAP6Q13023 2319 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 LRBAP50851 2863 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 MAP1BP46821 2468 aaKnown RBP0.19□□□□□ -2.38
CLK4-213ENST00000523013 DMXL2Q8TDJ6 3036 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 CSMD1Q96PZ7 3565 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 DMXL1Q9Y485 3027 aa0.19□□□□□ -2.38
CLK4-213ENST00000523013 EYSQ5T1H1 3165 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 ALMS1Q8TCU4 4167 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 ZNF292O60281 2723 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 CFAP46Q8IYW2 2715 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 ADGRG4Q8IZF6 3080 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 COL12A1Q99715 3063 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 PRRC2CQ9Y520 2896 aaKnown RBP0.18□□□□□ -2.38
CLK4-213ENST00000523013 CSMD3Q7Z407 3707 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 MGAQ8IWI9 3026 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 GCN1Q92616 2671 aaKnown RBP0.18□□□□□ -2.38
CLK4-213ENST00000523013 NF1P21359 2839 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 ZANQ9Y493 2812 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 LAMA5O15230 3695 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 DEFB123Q8N688 67 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 HECTD1Q9ULT8 2610 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 URB1O60287 2271 aaKnown RBP0.18□□□□□ -2.38
CLK4-213ENST00000523013 DOPEY2Q9Y3R5 2298 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
CLK4-213ENST00000523013 VPS13CQ709C8 3753 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 GVINP1Q7Z2Y8 2422 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 HIVEP1P15822 2718 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 TRRAPQ9Y4A5 3859 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 NEBP20929 6669 aa0.18□□□□□ -2.38
CLK4-213ENST00000523013 DSPP15924 2871 aaKnown RBP0.18□□□□□ -2.38
CLK4-213ENST00000523013 DNAH7Q8WXX0 4024 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms