RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 ST20-AS1Q8NBB2 130 aa4.49□□□□□ -1.69
GM2A-202ENST00000523004 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
GM2A-202ENST00000523004 ERC2-IT1O76042 136 aa4.48□□□□□ -1.69
GM2A-202ENST00000523004 FP248Q71RG6 208 aaPredicted RBP4.48□□□□□ -1.69
GM2A-202ENST00000523004 SMIM20Q8N5G0 67 aa4.48□□□□□ -1.69
GM2A-202ENST00000523004 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
GM2A-202ENST00000523004 BPY2O14599 106 aa4.47□□□□□ -1.69
GM2A-202ENST00000523004 KRTAP13-3Q3SY46 172 aa4.47□□□□□ -1.69
GM2A-202ENST00000523004 C5orf47Q569G3 176 aa4.47□□□□□ -1.69
GM2A-202ENST00000523004 SPRR4Q96PI1 79 aa4.47□□□□□ -1.69
GM2A-202ENST00000523004 ASB16-AS1Q495Z4 193 aa4.46□□□□□ -1.7
GM2A-202ENST00000523004 XP32Q5T750 250 aa4.46□□□□□ -1.7
GM2A-202ENST00000523004 SMIM29Q86T20 159 aa4.45□□□□□ -1.7
GM2A-202ENST00000523004 UQCRQO14949 82 aa4.44□□□□□ -1.7
GM2A-202ENST00000523004 A0A1W2PNM2 257 aa4.43□□□□□ -1.7
GM2A-202ENST00000523004 SPINK1P00995 79 aa4.43□□□□□ -1.7
GM2A-202ENST00000523004 SEC61GP60059 68 aa4.43□□□□□ -1.7
GM2A-202ENST00000523004 LINC00483Q53H64 154 aa4.43□□□□□ -1.7
GM2A-202ENST00000523004 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
GM2A-202ENST00000523004 SERP2Q8N6R1 65 aa4.43□□□□□ -1.7
GM2A-202ENST00000523004 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
GM2A-202ENST00000523004 C9orf153Q5TBE3 101 aa4.42□□□□□ -1.7
GM2A-202ENST00000523004 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
GM2A-202ENST00000523004 A0A087WVE0 104 aa4.41□□□□□ -1.7
GM2A-202ENST00000523004 COX7CP15954 63 aa4.41□□□□□ -1.7
GM2A-202ENST00000523004 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
GM2A-202ENST00000523004 J3KT08 172 aa4.4□□□□□ -1.71
GM2A-202ENST00000523004 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
GM2A-202ENST00000523004 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
GM2A-202ENST00000523004 TRAV7A0A075B6U4 112 aa4.39□□□□□ -1.71
GM2A-202ENST00000523004 A0A087WSZ3 146 aa4.39□□□□□ -1.71
GM2A-202ENST00000523004 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
GM2A-202ENST00000523004 IGLV9-49A0A0B4J1Y8 123 aa4.38□□□□□ -1.71
GM2A-202ENST00000523004 MOBPQ13875 183 aa4.38□□□□□ -1.71
GM2A-202ENST00000523004 IGKV4-1P06312 121 aa4.37□□□□□ -1.71
GM2A-202ENST00000523004 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
GM2A-202ENST00000523004 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
GM2A-202ENST00000523004 NDUFB1O75438 58 aa4.36□□□□□ -1.71
GM2A-202ENST00000523004 CD164Q04900 197 aa4.35□□□□□ -1.71
GM2A-202ENST00000523004 A8MWP4 228 aa4.34□□□□□ -1.71
GM2A-202ENST00000523004 HCG22E2RYF7 251 aa4.34□□□□□ -1.71
GM2A-202ENST00000523004 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
GM2A-202ENST00000523004 NDUFC1O43677 76 aa4.33□□□□□ -1.72
GM2A-202ENST00000523004 DSCR10P59022 87 aa4.33□□□□□ -1.72
GM2A-202ENST00000523004 Q8N9L7 120 aa4.33□□□□□ -1.72
GM2A-202ENST00000523004 K7EQZ3 153 aa4.32□□□□□ -1.72
GM2A-202ENST00000523004 TMEM258P61165 79 aa4.32□□□□□ -1.72
GM2A-202ENST00000523004 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
GM2A-202ENST00000523004 LINC00472Q9H8W2 130 aa4.31□□□□□ -1.72
GM2A-202ENST00000523004 A0A0G2JQZ4 141 aa4.3□□□□□ -1.72
GM2A-202ENST00000523004 MT1HP80294 61 aa4.3□□□□□ -1.72
GM2A-202ENST00000523004 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
GM2A-202ENST00000523004 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
GM2A-202ENST00000523004 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
GM2A-202ENST00000523004 C20orf197Q8N268 126 aa4.29□□□□□ -1.72
GM2A-202ENST00000523004 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
GM2A-202ENST00000523004 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
GM2A-202ENST00000523004 TMEM254Q8TBM7 123 aa4.28□□□□□ -1.72
GM2A-202ENST00000523004 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
GM2A-202ENST00000523004 MP68P56378 58 aa4.27□□□□□ -1.73
GM2A-202ENST00000523004 DEFB116Q30KQ4 102 aa4.27□□□□□ -1.73
GM2A-202ENST00000523004 HRCT1Q6UXD1 115 aa4.27□□□□□ -1.73
GM2A-202ENST00000523004 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
GM2A-202ENST00000523004 C9orf92A6NGG3 77 aa4.26□□□□□ -1.73
GM2A-202ENST00000523004 H3BPC8 53 aa4.26□□□□□ -1.73
GM2A-202ENST00000523004 Q5XG85 94 aa4.26□□□□□ -1.73
GM2A-202ENST00000523004 TP53AIP1Q9HCN2 124 aa4.26□□□□□ -1.73
GM2A-202ENST00000523004 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
GM2A-202ENST00000523004 KRTAP10-6P60371 365 aaPredicted RBP4.25□□□□□ -1.73
GM2A-202ENST00000523004 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
GM2A-202ENST00000523004 V9GYY9 64 aa4.25□□□□□ -1.73
GM2A-202ENST00000523004 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
GM2A-202ENST00000523004 Q96NJ1 140 aa4.24□□□□□ -1.73
GM2A-202ENST00000523004 FAM236DA0A1B0GTK5 79 aa4.23□□□□□ -1.73
GM2A-202ENST00000523004 FAM236CP0DP71 79 aa4.23□□□□□ -1.73
GM2A-202ENST00000523004 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
GM2A-202ENST00000523004 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
GM2A-202ENST00000523004 MMP24-AS1A0A0U1RRL7 71 aa4.22□□□□□ -1.73
GM2A-202ENST00000523004 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
GM2A-202ENST00000523004 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
GM2A-202ENST00000523004 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
GM2A-202ENST00000523004 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
GM2A-202ENST00000523004 TRAV22A0A0B4J277 110 aa4.2□□□□□ -1.74
GM2A-202ENST00000523004 H7BZZ5 65 aa4.2□□□□□ -1.74
GM2A-202ENST00000523004 C1orf195Q5TG92 126 aa4.2□□□□□ -1.74
GM2A-202ENST00000523004 M0R2T5 61 aa4.19□□□□□ -1.74
GM2A-202ENST00000523004 NDUFS5O43920 106 aa4.19□□□□□ -1.74
GM2A-202ENST00000523004 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
GM2A-202ENST00000523004 MRPL34Q9BQ48 92 aaKnown RBP4.19□□□□□ -1.74
GM2A-202ENST00000523004 H0Y9P7 68 aa4.18□□□□□ -1.74
GM2A-202ENST00000523004 COX6B2Q6YFQ2 88 aa4.17□□□□□ -1.74
GM2A-202ENST00000523004 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
GM2A-202ENST00000523004 SERP1Q9Y6X1 66 aa4.17□□□□□ -1.74
GM2A-202ENST00000523004 LINC00313P59037 77 aa4.16□□□□□ -1.74
GM2A-202ENST00000523004 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.75
GM2A-202ENST00000523004 LINC00208Q96KT6 92 aa4.15□□□□□ -1.75
GM2A-202ENST00000523004 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
GM2A-202ENST00000523004 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
GM2A-202ENST00000523004 SPANXA2-OT1Q8N9U9 137 aa4.14□□□□□ -1.75
GM2A-202ENST00000523004 C1orf64Q8NEQ6 169 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms