RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 IGKV2-30P06310 120 aa2.59□□□□□ -2
PCM1-215ENST00000522275 C4orf3Q8WVX3 66 aa2.59□□□□□ -2
PCM1-215ENST00000522275 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
PCM1-215ENST00000522275 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
PCM1-215ENST00000522275 CENPEQ02224 2701 aa2.58□□□□□ -2
PCM1-215ENST00000522275 TYMSOSQ8TAI1 123 aa2.58□□□□□ -2
PCM1-215ENST00000522275 MEGF8Q7Z7M0 2845 aa2.58□□□□□ -2
PCM1-215ENST00000522275 DEFB4AO15263 64 aa2.57□□□□□ -2
PCM1-215ENST00000522275 FBN2P35556 2912 aa2.57□□□□□ -2
PCM1-215ENST00000522275 HECTD1Q9ULT8 2610 aa2.57□□□□□ -2
PCM1-215ENST00000522275 PDZD2O15018 2839 aa2.57□□□□□ -2
PCM1-215ENST00000522275 A0A1W2PPR1 153 aa2.57□□□□□ -2
PCM1-215ENST00000522275 LCE4AQ5TA78 99 aa2.57□□□□□ -2
PCM1-215ENST00000522275 BAHCC1Q9P281 2608 aa2.56□□□□□ -2
PCM1-215ENST00000522275 MYO9AB2RTY4 2548 aa2.56□□□□□ -2
PCM1-215ENST00000522275 TRRAPQ9Y4A5 3859 aa2.56□□□□□ -2
PCM1-215ENST00000522275 HTN3P15516 51 aa2.56□□□□□ -2
PCM1-215ENST00000522275 MXRA5Q9NR99 2828 aa2.55□□□□□ -2
PCM1-215ENST00000522275 CFAP46Q8IYW2 2715 aa2.55□□□□□ -2
PCM1-215ENST00000522275 IGKV2D-30A0A075B6S6 120 aa2.55□□□□□ -2
PCM1-215ENST00000522275 ANKRD11Q6UB99 2663 aaPredicted RBP2.54□□□□□ -2
PCM1-215ENST00000522275 NBEAL1Q6ZS30 2694 aa2.53□□□□□ -2
PCM1-215ENST00000522275 CHD8Q9HCK8 2581 aa2.53□□□□□ -2
PCM1-215ENST00000522275 KRTAP24-1Q3LI83 254 aa2.53□□□□□ -2
PCM1-215ENST00000522275 LCE5AQ5TCM9 118 aa2.53□□□□□ -2
PCM1-215ENST00000522275 SPINK6Q6UWN8 80 aa2.53□□□□□ -2
PCM1-215ENST00000522275 WWC2-AS2Q96NR7 200 aa2.53□□□□□ -2
PCM1-215ENST00000522275 HELZ2Q9BYK8 2649 aaKnown RBP2.52□□□□□ -2.01
PCM1-215ENST00000522275 DMBT1Q9UGM3 2413 aaPredicted RBP2.52□□□□□ -2.01
PCM1-215ENST00000522275 RPL37P61927 97 aaKnown RBP2.52□□□□□ -2.01
PCM1-215ENST00000522275 C14orf177Q52M58 125 aa2.52□□□□□ -2.01
PCM1-215ENST00000522275 COL7A1Q02388 2944 aa2.52□□□□□ -2.01
PCM1-215ENST00000522275 DOPEY1Q5JWR5 2465 aa2.52□□□□□ -2.01
PCM1-215ENST00000522275 COX6B2Q6YFQ2 88 aa2.51□□□□□ -2.01
PCM1-215ENST00000522275 CEP295Q9C0D2 2601 aa2.51□□□□□ -2.01
PCM1-215ENST00000522275 KRTAP9-7A8MTY7 169 aa2.51□□□□□ -2.01
PCM1-215ENST00000522275 Q8N1X5 172 aa2.5□□□□□ -2.01
PCM1-215ENST00000522275 ZANQ9Y493 2812 aa2.5□□□□□ -2.01
PCM1-215ENST00000522275 DEFB135Q30KP9 77 aa2.49□□□□□ -2.01
PCM1-215ENST00000522275 LRRK2Q5S007 2527 aa2.48□□□□□ -2.01
PCM1-215ENST00000522275 SETD2Q9BYW2 2564 aaPredicted RBP2.48□□□□□ -2.01
PCM1-215ENST00000522275 PKD1L1Q8TDX9 2849 aa2.48□□□□□ -2.01
PCM1-215ENST00000522275 KRTAP23-1A1A580 65 aa2.47□□□□□ -2.01
PCM1-215ENST00000522275 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
PCM1-215ENST00000522275 PLAC4Q8WY50 150 aa2.47□□□□□ -2.01
PCM1-215ENST00000522275 LINC01556Q5JQF7 62 aa2.47□□□□□ -2.01
PCM1-215ENST00000522275 HIVEP1P15822 2718 aa2.47□□□□□ -2.01
PCM1-215ENST00000522275 EPG5Q9HCE0 2579 aa2.46□□□□□ -2.01
PCM1-215ENST00000522275 FAM208BQ5VWN6 2430 aa2.46□□□□□ -2.02
PCM1-215ENST00000522275 A0A0D9SG42 100 aa2.45□□□□□ -2.02
PCM1-215ENST00000522275 COL6A5A8TX70 2615 aa2.45□□□□□ -2.02
PCM1-215ENST00000522275 POLQO75417 2590 aa2.45□□□□□ -2.02
PCM1-215ENST00000522275 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
PCM1-215ENST00000522275 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
PCM1-215ENST00000522275 BDP1A6H8Y1 2624 aa2.45□□□□□ -2.02
PCM1-215ENST00000522275 APLNQ9ULZ1 77 aa2.44□□□□□ -2.02
PCM1-215ENST00000522275 ABCA12Q86UK0 2595 aa2.44□□□□□ -2.02
PCM1-215ENST00000522275 KRTAP13-1Q8IUC0 172 aa2.44□□□□□ -2.02
PCM1-215ENST00000522275 SPACA4Q8TDM5 124 aa2.44□□□□□ -2.02
PCM1-215ENST00000522275 KRTAP9-3Q9BYQ3 159 aa2.44□□□□□ -2.02
PCM1-215ENST00000522275 KRTAP3-1Q9BYR8 98 aa2.44□□□□□ -2.02
PCM1-215ENST00000522275 USP9YO00507 2555 aaPredicted RBP2.43□□□□□ -2.02
PCM1-215ENST00000522275 ACACBO00763 2458 aa2.43□□□□□ -2.02
PCM1-215ENST00000522275 KRTAP1-1Q07627 177 aa2.43□□□□□ -2.02
PCM1-215ENST00000522275 ATRQ13535 2644 aa2.42□□□□□ -2.02
PCM1-215ENST00000522275 H3BNG1 76 aa2.42□□□□□ -2.02
PCM1-215ENST00000522275 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
PCM1-215ENST00000522275 R4GN34 69 aa2.42□□□□□ -2.02
PCM1-215ENST00000522275 FRAS1Q86XX4 4008 aa2.41□□□□□ -2.02
PCM1-215ENST00000522275 TGP01266 2768 aa2.41□□□□□ -2.02
PCM1-215ENST00000522275 MAPK1IP1LQ8NDC0 245 aa2.41□□□□□ -2.02
PCM1-215ENST00000522275 ITPR2Q14571 2701 aa2.41□□□□□ -2.02
PCM1-215ENST00000522275 S4R3F8 94 aa2.41□□□□□ -2.02
PCM1-215ENST00000522275 ANK3Q12955 4377 aaKnown RBP2.4□□□□□ -2.02
PCM1-215ENST00000522275 PIEZO1Q92508 2521 aa2.4□□□□□ -2.02
PCM1-215ENST00000522275 DEFB124Q8NES8 71 aa2.4□□□□□ -2.03
PCM1-215ENST00000522275 KRTAP10-8P60410 259 aa2.39□□□□□ -2.03
PCM1-215ENST00000522275 Q6ZRN7 208 aaPredicted RBP2.39□□□□□ -2.03
PCM1-215ENST00000522275 ACANP16112 2415 aa2.39□□□□□ -2.03
PCM1-215ENST00000522275 TENM4Q6N022 2769 aa2.39□□□□□ -2.03
PCM1-215ENST00000522275 LYSTQ99698 3801 aa2.39□□□□□ -2.03
PCM1-215ENST00000522275 KRTAP12-2P59991 146 aa2.38□□□□□ -2.03
PCM1-215ENST00000522275 KRTAP10-6P60371 365 aaPredicted RBP2.37□□□□□ -2.03
PCM1-215ENST00000522275 FASNP49327 2511 aaKnown RBP2.36□□□□□ -2.03
PCM1-215ENST00000522275 UBE2DNLQ8IWF7 75 aa2.36□□□□□ -2.03
PCM1-215ENST00000522275 ITPR3Q14573 2671 aa2.36□□□□□ -2.03
PCM1-215ENST00000522275 DNAH1Q9P2D7 4330 aa2.35□□□□□ -2.03
PCM1-215ENST00000522275 VPS13DQ5THJ4 4388 aa2.35□□□□□ -2.03
PCM1-215ENST00000522275 KRTAP10-2P60368 255 aa2.34□□□□□ -2.03
PCM1-215ENST00000522275 DNAH10Q8IVF4 4471 aa2.34□□□□□ -2.03
PCM1-215ENST00000522275 DEFB123Q8N688 67 aa2.34□□□□□ -2.04
PCM1-215ENST00000522275 ANK2Q01484 3957 aa2.33□□□□□ -2.04
PCM1-215ENST00000522275 NOTCH2Q04721 2471 aa2.33□□□□□ -2.04
PCM1-215ENST00000522275 NOTCH1P46531 2555 aa2.33□□□□□ -2.04
PCM1-215ENST00000522275 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
PCM1-215ENST00000522275 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
PCM1-215ENST00000522275 STAB2Q8WWQ8 2551 aa2.31□□□□□ -2.04
PCM1-215ENST00000522275 DNAH17Q9UFH2 4485 aa2.31□□□□□ -2.04
PCM1-215ENST00000522275 ZNF469Q96JG9 3925 aaPredicted RBP2.3□□□□□ -2.04
PCM1-215ENST00000522275 ZNF292O60281 2723 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms