RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 FAM240AA0A1B0GVK7 77 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 NREPQ16612 68 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 Q6JHZ5 121 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 LINC00643Q86TS7 51 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 SPRR4Q96PI1 79 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 ANAPC13Q9BS18 74 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 UBL5Q9BZL1 73 aa1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 DYNC1H1Q14204 4646 aaKnown RBP1.54□□□□□ -2.16
CKS1BP7-201ENST00000522230 CCDC179H3BU77 68 aa1.53□□□□□ -2.16
CKS1BP7-201ENST00000522230 ACYP1P07311 99 aa1.53□□□□□ -2.16
CKS1BP7-201ENST00000522230 C5orf47Q569G3 176 aa1.53□□□□□ -2.16
CKS1BP7-201ENST00000522230 FLG2Q5D862 2391 aaPredicted RBP1.53□□□□□ -2.16
CKS1BP7-201ENST00000522230 SPINK6Q6UWN8 80 aa1.53□□□□□ -2.16
CKS1BP7-201ENST00000522230 WFDC13Q8IUB5 93 aa1.53□□□□□ -2.16
CKS1BP7-201ENST00000522230 CSMD3Q7Z407 3707 aa1.53□□□□□ -2.17
CKS1BP7-201ENST00000522230 KMT2AQ03164 3969 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 TRBV7-7A0A0K0K1E9 115 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 H3BQ85 93 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 K7EQZ3 153 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 SCGB1A1P11684 91 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 Q5W150 140 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 Q6ZSA8 131 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 LYSTQ99698 3801 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 ZNF706Q9Y5V0 76 aaPredicted RBP1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 SRRM2Q9UQ35 2752 aaKnown RBP1.52□□□□□ -2.17
CKS1BP7-201ENST00000522230 DNAH8Q96JB1 4490 aa1.51□□□□□ -2.17
CKS1BP7-201ENST00000522230 A0A0U1RQV1 116 aa1.51□□□□□ -2.17
CKS1BP7-201ENST00000522230 IGKV4-1P06312 121 aa1.51□□□□□ -2.17
CKS1BP7-201ENST00000522230 PDE6GP18545 87 aa1.51□□□□□ -2.17
CKS1BP7-201ENST00000522230 SPRR1BP22528 89 aa1.51□□□□□ -2.17
CKS1BP7-201ENST00000522230 KRTAP13-2Q52LG2 175 aa1.51□□□□□ -2.17
CKS1BP7-201ENST00000522230 RETNLBQ9BQ08 111 aa1.51□□□□□ -2.17
CKS1BP7-201ENST00000522230 IGHV6-1A0A0B4J1U7 121 aa1.5□□□□□ -2.17
CKS1BP7-201ENST00000522230 NDUFS5O43920 106 aa1.5□□□□□ -2.17
CKS1BP7-201ENST00000522230 CRYGAP11844 174 aa1.5□□□□□ -2.17
CKS1BP7-201ENST00000522230 ATP5EP2Q5VTU8 51 aa1.5□□□□□ -2.17
CKS1BP7-201ENST00000522230 LCE3DQ9BYE3 92 aa1.5□□□□□ -2.17
CKS1BP7-201ENST00000522230 CYSTM1Q9H1C7 97 aa1.5□□□□□ -2.17
CKS1BP7-201ENST00000522230 FAT2Q9NYQ8 4349 aa1.5□□□□□ -2.17
CKS1BP7-201ENST00000522230 LRP1BQ9NZR2 4599 aa1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 RYR3Q15413 4870 aa1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 Q5VSD8 79 aa1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 Q6Q795 121 aa1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 C8orf17Q9NRJ1 99 aa1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 SS18L2Q9UHA2 77 aa1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 SNURFQ9Y675 71 aa1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 KMT2CQ8NEZ4 4911 aaKnown RBP1.49□□□□□ -2.17
CKS1BP7-201ENST00000522230 HCG22E2RYF7 251 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 ATOX1O00244 68 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 PSPHP1O15172 72 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 CD164Q04900 197 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 CASC2Q6XLA1 102 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 C20orf197Q8N268 126 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 Q96NJ1 140 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 APOBP04114 4563 aaKnown RBP1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 FRAS1Q86XX4 4008 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 KIAA1109Q2LD37 5005 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 FAT1Q14517 4588 aa1.48□□□□□ -2.17
CKS1BP7-201ENST00000522230 RYR1P21817 5038 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 PKHD1P08F94 4074 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 C9orf92A6NGG3 77 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 A8MWP4 228 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 COX7CP15954 63 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 KRTAP10-8P60410 259 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 PRR15Q8IV56 129 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 SERP2Q8N6R1 65 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 LINC00304Q8N9R0 145 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 IMUPQ9GZP8 106 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 LINC00472Q9H8W2 130 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 PRO0628Q9UI54 55 aa1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 DMBT1Q9UGM3 2413 aaPredicted RBP1.47□□□□□ -2.17
CKS1BP7-201ENST00000522230 TRAV7A0A075B6U4 112 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 MMP24-AS1A0A0U1RRL7 71 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 NDUFB1O75438 58 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 KRTAP13-3Q3SY46 172 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 FAM229BQ4G0N7 80 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 C1orf195Q5TG92 126 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 SSBP3-AS1Q7Z2R9 100 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 PKD1P98161 4303 aa1.46□□□□□ -2.18
CKS1BP7-201ENST00000522230 EPPK1P58107 5090 aaKnown RBP1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 hDV103S1A0JD37 113 aa1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 H0Y9P7 68 aa1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 J3KT08 172 aa1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 UQCRQO14949 82 aa1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 RBM12B-AS1Q9P1G2 102 aa1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 HECTD4Q9Y4D8 3996 aa1.45□□□□□ -2.18
CKS1BP7-201ENST00000522230 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
CKS1BP7-201ENST00000522230 TMEM254Q8TBM7 123 aa1.44□□□□□ -2.18
CKS1BP7-201ENST00000522230 LINC00208Q96KT6 92 aa1.44□□□□□ -2.18
CKS1BP7-201ENST00000522230 LIMD2Q9BT23 127 aa1.44□□□□□ -2.18
CKS1BP7-201ENST00000522230 HSPG2P98160 4391 aa1.44□□□□□ -2.18
CKS1BP7-201ENST00000522230 BIRC6Q9NR09 4857 aa1.44□□□□□ -2.18
CKS1BP7-201ENST00000522230 PCLOQ9Y6V0 5065 aa1.43□□□□□ -2.18
CKS1BP7-201ENST00000522230 A0A1B0GW54 56 aa1.43□□□□□ -2.18
CKS1BP7-201ENST00000522230 A8MUU9 505 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms