RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 HIGD2AQ9BW72 106 aa2.88□□□□□ -1.95
CNOT8-220ENST00000522139 LINC00472Q9H8W2 130 aa2.88□□□□□ -1.95
CNOT8-220ENST00000522139 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
CNOT8-220ENST00000522139 DEFB131BA0A096LNP1 70 aa2.87□□□□□ -1.95
CNOT8-220ENST00000522139 A8MWP4 228 aa2.87□□□□□ -1.95
CNOT8-220ENST00000522139 PSPHP1O15172 72 aa2.87□□□□□ -1.95
CNOT8-220ENST00000522139 DEFB4AO15263 64 aa2.87□□□□□ -1.95
CNOT8-220ENST00000522139 PSCAO43653 123 aa2.87□□□□□ -1.95
CNOT8-220ENST00000522139 LINC00474Q9P2X8 69 aa2.87□□□□□ -1.95
CNOT8-220ENST00000522139 PKD1L1Q8TDX9 2849 aa2.87□□□□□ -1.95
CNOT8-220ENST00000522139 C3orf84H3BNL1 204 aa2.86□□□□□ -1.95
CNOT8-220ENST00000522139 K7EQZ3 153 aa2.86□□□□□ -1.95
CNOT8-220ENST00000522139 FAM229BQ4G0N7 80 aa2.86□□□□□ -1.95
CNOT8-220ENST00000522139 IGFL1Q6UW32 110 aa2.86□□□□□ -1.95
CNOT8-220ENST00000522139 SCXQ7RTU7 201 aa2.86□□□□□ -1.95
CNOT8-220ENST00000522139 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
CNOT8-220ENST00000522139 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
CNOT8-220ENST00000522139 MAST4O15021 2626 aa2.86□□□□□ -1.95
CNOT8-220ENST00000522139 TENM3Q9P273 2699 aa2.85□□□□□ -1.95
CNOT8-220ENST00000522139 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
CNOT8-220ENST00000522139 HTN3P15516 51 aa2.85□□□□□ -1.95
CNOT8-220ENST00000522139 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
CNOT8-220ENST00000522139 B9D2Q9BPU9 175 aa2.85□□□□□ -1.95
CNOT8-220ENST00000522139 UBE2BP63146 152 aa2.84□□□□□ -1.95
CNOT8-220ENST00000522139 PLAC8Q9NZF1 115 aa2.84□□□□□ -1.95
CNOT8-220ENST00000522139 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
CNOT8-220ENST00000522139 ATP11AUNQ6ZP68 121 aa2.83□□□□□ -1.96
CNOT8-220ENST00000522139 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
CNOT8-220ENST00000522139 DEFB105AQ8NG35 78 aa2.83□□□□□ -1.96
CNOT8-220ENST00000522139 BRK1Q8WUW1 75 aa2.83□□□□□ -1.96
CNOT8-220ENST00000522139 LYSTQ99698 3801 aa2.83□□□□□ -1.96
CNOT8-220ENST00000522139 A8MUU9 505 aa2.82□□□□□ -1.96
CNOT8-220ENST00000522139 KRTAP10-8P60410 259 aa2.82□□□□□ -1.96
CNOT8-220ENST00000522139 CASC2Q6XLA1 102 aa2.82□□□□□ -1.96
CNOT8-220ENST00000522139 LINC00208Q96KT6 92 aa2.82□□□□□ -1.96
CNOT8-220ENST00000522139 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
CNOT8-220ENST00000522139 HUWE1Q7Z6Z7 4374 aaKnown RBP2.82□□□□□ -1.96
CNOT8-220ENST00000522139 A0A087WSZ3 146 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 H0Y9P7 68 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 Q5VV11 94 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 PHF5AQ7RTV0 110 aaKnown RBP2.81□□□□□ -1.96
CNOT8-220ENST00000522139 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
CNOT8-220ENST00000522139 FLNBO75369 2602 aaKnown RBP2.8□□□□□ -1.96
CNOT8-220ENST00000522139 CD164Q04900 197 aa2.8□□□□□ -1.96
CNOT8-220ENST00000522139 SMR3AQ99954 134 aa2.8□□□□□ -1.96
CNOT8-220ENST00000522139 ZNF706Q9Y5V0 76 aaPredicted RBP2.8□□□□□ -1.96
CNOT8-220ENST00000522139 A0A096LNI7 61 aa2.79□□□□□ -1.96
CNOT8-220ENST00000522139 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
CNOT8-220ENST00000522139 NDUFS5O43920 106 aa2.79□□□□□ -1.96
CNOT8-220ENST00000522139 KRTAP13-2Q52LG2 175 aa2.79□□□□□ -1.96
CNOT8-220ENST00000522139 Q96NJ1 140 aa2.79□□□□□ -1.96
CNOT8-220ENST00000522139 HECTD4Q9Y4D8 3996 aa2.78□□□□□ -1.96
CNOT8-220ENST00000522139 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
CNOT8-220ENST00000522139 TENM2Q9NT68 2774 aa2.78□□□□□ -1.96
CNOT8-220ENST00000522139 STAB2Q8WWQ8 2551 aa2.77□□□□□ -1.97
CNOT8-220ENST00000522139 STAB1Q9NY15 2570 aa2.77□□□□□ -1.97
CNOT8-220ENST00000522139 VPS13DQ5THJ4 4388 aa2.77□□□□□ -1.97
CNOT8-220ENST00000522139 F8P00451 2351 aa2.77□□□□□ -1.97
CNOT8-220ENST00000522139 HECTD1Q9ULT8 2610 aa2.77□□□□□ -1.97
CNOT8-220ENST00000522139 ALMS1Q8TCU4 4167 aa2.77□□□□□ -1.97
CNOT8-220ENST00000522139 DNAH9Q9NYC9 4486 aa2.77□□□□□ -1.97
CNOT8-220ENST00000522139 BAHCC1Q9P281 2608 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 IGKV2-24A0A0C4DH68 120 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 A8MUN3 132 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 C8orf87E5RJ46 101 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 Q6ZRN7 208 aaPredicted RBP2.76□□□□□ -1.97
CNOT8-220ENST00000522139 COA5Q86WW8 74 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 APLNQ9ULZ1 77 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 DNAH10Q8IVF4 4471 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 NOTCH1P46531 2555 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 DNAH7Q8WXX0 4024 aa2.76□□□□□ -1.97
CNOT8-220ENST00000522139 PRLHP81277 87 aa2.75□□□□□ -1.97
CNOT8-220ENST00000522139 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
CNOT8-220ENST00000522139 WFDC13Q8IUB5 93 aa2.75□□□□□ -1.97
CNOT8-220ENST00000522139 SPACA4Q8TDM5 124 aa2.75□□□□□ -1.97
CNOT8-220ENST00000522139 MRPL34Q9BQ48 92 aaKnown RBP2.75□□□□□ -1.97
CNOT8-220ENST00000522139 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
CNOT8-220ENST00000522139 DNAH17Q9UFH2 4485 aa2.74□□□□□ -1.97
CNOT8-220ENST00000522139 A6NN06 94 aa2.74□□□□□ -1.97
CNOT8-220ENST00000522139 SSBP3-AS1Q7Z2R9 100 aa2.74□□□□□ -1.97
CNOT8-220ENST00000522139 PLECQ15149 4684 aaKnown RBP2.74□□□□□ -1.97
CNOT8-220ENST00000522139 DNAH6Q9C0G6 4158 aa2.74□□□□□ -1.97
CNOT8-220ENST00000522139 NBDYA0A0U1RRE5 68 aa2.73□□□□□ -1.97
CNOT8-220ENST00000522139 K7EIL1 84 aa2.73□□□□□ -1.97
CNOT8-220ENST00000522139 LCA10Q71F78 164 aa2.73□□□□□ -1.97
CNOT8-220ENST00000522139 PRKDCP78527 4128 aaKnown RBP2.73□□□□□ -1.97
CNOT8-220ENST00000522139 DNAH8Q96JB1 4490 aa2.72□□□□□ -1.97
CNOT8-220ENST00000522139 NUPR2A6NF83 97 aa2.72□□□□□ -1.97
CNOT8-220ENST00000522139 CHKB-CPT1BH3BT56 60 aa2.72□□□□□ -1.97
CNOT8-220ENST00000522139 COL6A5A8TX70 2615 aa2.72□□□□□ -1.97
CNOT8-220ENST00000522139 CSMD3Q7Z407 3707 aa2.71□□□□□ -1.97
CNOT8-220ENST00000522139 FBN1P35555 2871 aaKnown RBP2.71□□□□□ -1.97
CNOT8-220ENST00000522139 ACYP2P14621 99 aa2.71□□□□□ -1.98
CNOT8-220ENST00000522139 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
CNOT8-220ENST00000522139 DMAC1Q96GE9 116 aa2.71□□□□□ -1.98
CNOT8-220ENST00000522139 PRR15LQ9BU68 103 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms