RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 HRCT1Q6UXD1 115 aa5.52□□□□□ -1.53
SHPRH-209ENST00000521977 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
SHPRH-209ENST00000521977 ATP5EP2Q5VTU8 51 aa5.51□□□□□ -1.53
SHPRH-209ENST00000521977 Q5XG85 94 aa5.51□□□□□ -1.53
SHPRH-209ENST00000521977 KRTAP10-8P60410 259 aa5.5□□□□□ -1.53
SHPRH-209ENST00000521977 CXCL6P80162 114 aa5.5□□□□□ -1.53
SHPRH-209ENST00000521977 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
SHPRH-209ENST00000521977 SIGMAR1Q99720 223 aa5.5□□□□□ -1.53
SHPRH-209ENST00000521977 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
SHPRH-209ENST00000521977 SS18L2Q9UHA2 77 aa5.5□□□□□ -1.53
SHPRH-209ENST00000521977 RPS29P62273 56 aaKnown RBP5.49□□□□□ -1.53
SHPRH-209ENST00000521977 Q96NJ1 140 aa5.49□□□□□ -1.53
SHPRH-209ENST00000521977 IGKV3D-7A0A0C4DH55 119 aa5.48□□□□□ -1.53
SHPRH-209ENST00000521977 SPINK1P00995 79 aa5.48□□□□□ -1.53
SHPRH-209ENST00000521977 SPAG11AQ6PDA7 123 aa5.48□□□□□ -1.53
SHPRH-209ENST00000521977 LINC00304Q8N9R0 145 aa5.48□□□□□ -1.53
SHPRH-209ENST00000521977 BPY2O14599 106 aa5.47□□□□□ -1.53
SHPRH-209ENST00000521977 IMUPQ9GZP8 106 aa5.47□□□□□ -1.53
SHPRH-209ENST00000521977 LIMD2Q9BT23 127 aa5.46□□□□□ -1.54
SHPRH-209ENST00000521977 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.54
SHPRH-209ENST00000521977 MYCBP2O75592 4640 aa5.45□□□□□ -1.54
SHPRH-209ENST00000521977 DSCR10P59022 87 aa5.45□□□□□ -1.54
SHPRH-209ENST00000521977 J3KT08 172 aa5.44□□□□□ -1.54
SHPRH-209ENST00000521977 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
SHPRH-209ENST00000521977 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
SHPRH-209ENST00000521977 OXTP01178 125 aa5.43□□□□□ -1.54
SHPRH-209ENST00000521977 IGKV4-1P06312 121 aa5.43□□□□□ -1.54
SHPRH-209ENST00000521977 C1orf195Q5TG92 126 aa5.42□□□□□ -1.54
SHPRH-209ENST00000521977 FLG2Q5D862 2391 aaPredicted RBP5.41□□□□□ -1.54
SHPRH-209ENST00000521977 A8MWP4 228 aa5.41□□□□□ -1.54
SHPRH-209ENST00000521977 K7EQZ3 153 aa5.41□□□□□ -1.54
SHPRH-209ENST00000521977 Q8N9L7 120 aa5.4□□□□□ -1.54
SHPRH-209ENST00000521977 A0A087WVE0 104 aa5.39□□□□□ -1.55
SHPRH-209ENST00000521977 KRTAP29-1A8MX34 341 aaPredicted RBP5.39□□□□□ -1.55
SHPRH-209ENST00000521977 HIST1H4AP62805 103 aaKnown RBP5.39□□□□□ -1.55
SHPRH-209ENST00000521977 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
SHPRH-209ENST00000521977 SCGB1A1P11684 91 aa5.38□□□□□ -1.55
SHPRH-209ENST00000521977 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
SHPRH-209ENST00000521977 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
SHPRH-209ENST00000521977 NDUFB1O75438 58 aa5.36□□□□□ -1.55
SHPRH-209ENST00000521977 MMP24-AS1A0A0U1RRL7 71 aa5.34□□□□□ -1.55
SHPRH-209ENST00000521977 FAM236AA0A1B0GUQ0 79 aa5.34□□□□□ -1.55
SHPRH-209ENST00000521977 FAM236BA0A1B0GV22 79 aa5.34□□□□□ -1.55
SHPRH-209ENST00000521977 HCG22E2RYF7 251 aa5.33□□□□□ -1.56
SHPRH-209ENST00000521977 C8orf17Q9NRJ1 99 aa5.33□□□□□ -1.56
SHPRH-209ENST00000521977 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
SHPRH-209ENST00000521977 C8orf87E5RJ46 101 aa5.32□□□□□ -1.56
SHPRH-209ENST00000521977 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
SHPRH-209ENST00000521977 DMBT1Q9UGM3 2413 aaPredicted RBP5.31□□□□□ -1.56
SHPRH-209ENST00000521977 PCLOQ9Y6V0 5065 aa5.3□□□□□ -1.56
SHPRH-209ENST00000521977 RETNLBQ9BQ08 111 aa5.3□□□□□ -1.56
SHPRH-209ENST00000521977 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
SHPRH-209ENST00000521977 ATOX1O00244 68 aa5.29□□□□□ -1.56
SHPRH-209ENST00000521977 CASC2Q6XLA1 102 aa5.29□□□□□ -1.56
SHPRH-209ENST00000521977 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
SHPRH-209ENST00000521977 WFDC13Q8IUB5 93 aa5.29□□□□□ -1.56
SHPRH-209ENST00000521977 LINC00313P59037 77 aa5.28□□□□□ -1.56
SHPRH-209ENST00000521977 TMEM254Q8TBM7 123 aa5.28□□□□□ -1.56
SHPRH-209ENST00000521977 KRTAP16-1A8MUX0 517 aa5.27□□□□□ -1.57
SHPRH-209ENST00000521977 MRPL34Q9BQ48 92 aaKnown RBP5.26□□□□□ -1.57
SHPRH-209ENST00000521977 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
SHPRH-209ENST00000521977 SMIM20Q8N5G0 67 aa5.25□□□□□ -1.57
SHPRH-209ENST00000521977 OCR1Q9BZK8 76 aa5.25□□□□□ -1.57
SHPRH-209ENST00000521977 Q8N9P0 234 aaPredicted RBP5.24□□□□□ -1.57
SHPRH-209ENST00000521977 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
SHPRH-209ENST00000521977 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
SHPRH-209ENST00000521977 ANAPC13Q9BS18 74 aa5.22□□□□□ -1.57
SHPRH-209ENST00000521977 SERP2Q8N6R1 65 aa5.21□□□□□ -1.58
SHPRH-209ENST00000521977 C9orf92A6NGG3 77 aa5.2□□□□□ -1.58
SHPRH-209ENST00000521977 KRTAP13-3Q3SY46 172 aa5.2□□□□□ -1.58
SHPRH-209ENST00000521977 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
SHPRH-209ENST00000521977 UQCRQO14949 82 aa5.19□□□□□ -1.58
SHPRH-209ENST00000521977 COX7CP15954 63 aa5.19□□□□□ -1.58
SHPRH-209ENST00000521977 C20orf166-AS1Q96NR2 134 aa5.19□□□□□ -1.58
SHPRH-209ENST00000521977 A8MUU9 505 aa5.18□□□□□ -1.58
SHPRH-209ENST00000521977 PCP4P48539 62 aa5.18□□□□□ -1.58
SHPRH-209ENST00000521977 PRR4Q16378 134 aa5.18□□□□□ -1.58
SHPRH-209ENST00000521977 NDUFS5O43920 106 aa5.17□□□□□ -1.58
SHPRH-209ENST00000521977 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
SHPRH-209ENST00000521977 C5orf47Q569G3 176 aa5.15□□□□□ -1.59
SHPRH-209ENST00000521977 Q75L30 129 aa5.15□□□□□ -1.59
SHPRH-209ENST00000521977 TRAV22A0A0B4J277 110 aa5.14□□□□□ -1.59
SHPRH-209ENST00000521977 HERC1Q15751 4861 aa5.13□□□□□ -1.59
SHPRH-209ENST00000521977 CCDC179H3BU77 68 aa5.13□□□□□ -1.59
SHPRH-209ENST00000521977 Q5W150 140 aa5.13□□□□□ -1.59
SHPRH-209ENST00000521977 A0A0U1RQV1 116 aa5.12□□□□□ -1.59
SHPRH-209ENST00000521977 H0Y9P7 68 aa5.12□□□□□ -1.59
SHPRH-209ENST00000521977 H3BPC8 53 aa5.12□□□□□ -1.59
SHPRH-209ENST00000521977 LPAP08519 4548 aa5.12□□□□□ -1.59
SHPRH-209ENST00000521977 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
SHPRH-209ENST00000521977 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
SHPRH-209ENST00000521977 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
SHPRH-209ENST00000521977 MP68P56378 58 aa5.1□□□□□ -1.59
SHPRH-209ENST00000521977 KLKP1Q107X0 134 aa5.1□□□□□ -1.59
SHPRH-209ENST00000521977 C20orf197Q8N268 126 aa5.1□□□□□ -1.59
SHPRH-209ENST00000521977 LRP2P98164 4655 aa5.08□□□□□ -1.6
SHPRH-209ENST00000521977 LINC00208Q96KT6 92 aa5.07□□□□□ -1.6
SHPRH-209ENST00000521977 LOC101927531A0A1B0GV80 90 aa5.06□□□□□ -1.6
SHPRH-209ENST00000521977 C1orf64Q8NEQ6 169 aa5.06□□□□□ -1.6
SHPRH-209ENST00000521977 CYSTM1Q9H1C7 97 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms